RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 RPL39LQ96EH5 51 aaKnown RBP11.31□□□□□ -0.6
U2AF1-210ENST00000478282 CENPVL3A0A0U1RRI6 287 aa11.3□□□□□ -0.6
U2AF1-210ENST00000478282 C19orf84I3L1E1 186 aa11.3□□□□□ -0.6
U2AF1-210ENST00000478282 DPH3P1Q9H4G8 78 aa11.3□□□□□ -0.6
U2AF1-210ENST00000478282 M0R381 172 aa11.3□□□□□ -0.6
U2AF1-210ENST00000478282 PSMB2P49721 201 aa11.3□□□□□ -0.6
U2AF1-210ENST00000478282 SRSF9Q13242 221 aaKnown RBP eCLIP11.3□□□□□ -0.6
U2AF1-210ENST00000478282 RNF223E7ERA6 249 aa11.3□□□□□ -0.6
U2AF1-210ENST00000478282 UBE2D3P61077 147 aa11.3□□□□□ -0.6
U2AF1-210ENST00000478282 UBE2D2P62837 147 aa11.3□□□□□ -0.6
U2AF1-210ENST00000478282 LOC107984156A0A0G2JMH3 177 aa11.29□□□□□ -0.6
U2AF1-210ENST00000478282 ATP6V0E1O15342 81 aa11.29□□□□□ -0.6
U2AF1-210ENST00000478282 ARL17AQ8IVW1 177 aa11.29□□□□□ -0.6
U2AF1-210ENST00000478282 LENEPQ9Y5L5 61 aa11.29□□□□□ -0.6
U2AF1-210ENST00000478282 C1orf122Q6ZSJ8 110 aa11.29□□□□□ -0.6
U2AF1-210ENST00000478282 U3KQE9 123 aa11.29□□□□□ -0.6
U2AF1-210ENST00000478282 FLNCQ14315 2725 aa11.29□□□□□ -0.6
U2AF1-210ENST00000478282 ZNF462Q96JM2 2506 aa11.29□□□□□ -0.6
U2AF1-210ENST00000478282 ZFP2Q6ZN57 461 aa11.29□□□□□ -0.6
U2AF1-210ENST00000478282 CD7P09564 240 aa11.28□□□□□ -0.6
U2AF1-210ENST00000478282 C14orf178Q8N769 122 aaPredicted RBP11.28□□□□□ -0.6
U2AF1-210ENST00000478282 ZNF418Q8TF45 676 aaPredicted RBP11.28□□□□□ -0.6
U2AF1-210ENST00000478282 EEF1AKMT3Q96AZ1 226 aa11.28□□□□□ -0.6
U2AF1-210ENST00000478282 C16orf92Q96LL3 132 aa11.28□□□□□ -0.6
U2AF1-210ENST00000478282 SPRY2O43597 315 aa11.28□□□□□ -0.6
U2AF1-210ENST00000478282 IGF1P05019 195 aa11.28□□□□□ -0.6
U2AF1-210ENST00000478282 PLA2G2AP14555 144 aa11.28□□□□□ -0.6
U2AF1-210ENST00000478282 CRYBA4P53673 196 aa11.28□□□□□ -0.6
U2AF1-210ENST00000478282 LYRM7Q5U5X0 104 aa11.28□□□□□ -0.6
U2AF1-210ENST00000478282 SFTA2Q6UW10 78 aa11.28□□□□□ -0.6
U2AF1-210ENST00000478282 GEMIN7Q9H840 131 aaKnown RBP11.28□□□□□ -0.6
U2AF1-210ENST00000478282 SPINK8P0C7L1 97 aa11.27□□□□□ -0.6
U2AF1-210ENST00000478282 FHL3Q13643 280 aa11.27□□□□□ -0.6
U2AF1-210ENST00000478282 HRNRQ86YZ3 2850 aaPredicted RBP11.27□□□□□ -0.61
U2AF1-210ENST00000478282 ABCA4P78363 2273 aa11.27□□□□□ -0.61
U2AF1-210ENST00000478282 TRAV26-1A0A087WT03 109 aa11.27□□□□□ -0.61
U2AF1-210ENST00000478282 J3KRW8 73 aa11.27□□□□□ -0.61
U2AF1-210ENST00000478282 MGPP08493 103 aa11.27□□□□□ -0.61
U2AF1-210ENST00000478282 S100A4P26447 101 aaKnown RBP11.27□□□□□ -0.61
U2AF1-210ENST00000478282 KLHL30-AS1Q8NEE0 82 aa11.27□□□□□ -0.61
U2AF1-210ENST00000478282 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
U2AF1-210ENST00000478282 ZFAND2AQ8N6M9 145 aa11.26□□□□□ -0.61
U2AF1-210ENST00000478282 PPDPFLQ8WWR9 84 aa11.26□□□□□ -0.61
U2AF1-210ENST00000478282 C20orf173Q96LM9 149 aa11.26□□□□□ -0.61
U2AF1-210ENST00000478282 TRBV7-1A0A0A6YYK4 115 aa11.26□□□□□ -0.61
U2AF1-210ENST00000478282 MT-ATP8P03928 68 aa11.26□□□□□ -0.61
U2AF1-210ENST00000478282 ASIPP42127 132 aa11.26□□□□□ -0.61
U2AF1-210ENST00000478282 Q5PR19 223 aa11.26□□□□□ -0.61
U2AF1-210ENST00000478282 Q6ZUT4 128 aa11.26□□□□□ -0.61
U2AF1-210ENST00000478282 GLMPQ8WWB7 406 aa11.26□□□□□ -0.61
U2AF1-210ENST00000478282 PTH2Q96A98 100 aa11.26□□□□□ -0.61
U2AF1-210ENST00000478282 PHLDA3Q9Y5J5 127 aa11.26□□□□□ -0.61
U2AF1-210ENST00000478282 TRAV21A0A0B4J279 112 aa11.25□□□□□ -0.61
U2AF1-210ENST00000478282 G3V318 75 aa11.25□□□□□ -0.61
U2AF1-210ENST00000478282 CRYGDP07320 174 aa11.25□□□□□ -0.61
U2AF1-210ENST00000478282 NDUFA11Q86Y39 141 aa11.25□□□□□ -0.61
U2AF1-210ENST00000478282 DCHS2Q6V1P9 2916 aa11.25□□□□□ -0.61
U2AF1-210ENST00000478282 DOPEY1Q5JWR5 2465 aa11.25□□□□□ -0.61
U2AF1-210ENST00000478282 TEN1Q86WV5 123 aa11.25□□□□□ -0.61
U2AF1-210ENST00000478282 CARD19Q96LW7 228 aa11.25□□□□□ -0.61
U2AF1-210ENST00000478282 NBASA2RRP1 2371 aa11.25□□□□□ -0.61
U2AF1-210ENST00000478282 A0A0J9YY99 117 aa11.25□□□□□ -0.61
U2AF1-210ENST00000478282 C11orf86A6NJI1 115 aa11.25□□□□□ -0.61
U2AF1-210ENST00000478282 DUSP14O95147 198 aaKnown RBP11.25□□□□□ -0.61
U2AF1-210ENST00000478282 LINC00477Q96M19 166 aa11.25□□□□□ -0.61
U2AF1-210ENST00000478282 IGLV4-69A0A075B6H9 119 aa11.24□□□□□ -0.61
U2AF1-210ENST00000478282 PPP1R17O96001 155 aa11.24□□□□□ -0.61
U2AF1-210ENST00000478282 XGP55808 180 aa11.24□□□□□ -0.61
U2AF1-210ENST00000478282 HERVK_113P61574 105 aa11.24□□□□□ -0.61
U2AF1-210ENST00000478282 WFDC12Q8WWY7 111 aa11.24□□□□□ -0.61
U2AF1-210ENST00000478282 ANKHD1Q8IWZ3 2542 aaKnown RBP11.24□□□□□ -0.61
U2AF1-210ENST00000478282 MED14OSP0DP75 135 aa11.24□□□□□ -0.61
U2AF1-210ENST00000478282 TCL1BO95988 128 aa11.24□□□□□ -0.61
U2AF1-210ENST00000478282 PAPPA-AS1Q5QFB9 102 aa11.24□□□□□ -0.61
U2AF1-210ENST00000478282 GPHB5Q86YW7 130 aa11.24□□□□□ -0.61
U2AF1-210ENST00000478282 SVIPQ8NHG7 77 aa11.24□□□□□ -0.61
U2AF1-210ENST00000478282 USP9XQ93008 2570 aaPredicted RBP11.23□□□□□ -0.61
U2AF1-210ENST00000478282 TRBV20-1A0A075B6N2 111 aa11.23□□□□□ -0.61
U2AF1-210ENST00000478282 IGHV1-69DA0A0B4J2H0 117 aa11.23□□□□□ -0.61
U2AF1-210ENST00000478282 ANXA2RQ3ZCQ2 193 aa11.23□□□□□ -0.61
U2AF1-210ENST00000478282 FAM208BQ5VWN6 2430 aa11.23□□□□□ -0.61
U2AF1-210ENST00000478282 LINC01548A6NM66 108 aa11.23□□□□□ -0.61
U2AF1-210ENST00000478282 SBSPONQ8IVN8 264 aa11.23□□□□□ -0.61
U2AF1-210ENST00000478282 VCX2Q9H322 139 aa11.23□□□□□ -0.61
U2AF1-210ENST00000478282 LRBAP50851 2863 aa11.23□□□□□ -0.61
U2AF1-210ENST00000478282 TENM4Q6N022 2769 aa11.22□□□□□ -0.61
U2AF1-210ENST00000478282 A0A1W2PPR1 153 aa11.22□□□□□ -0.61
U2AF1-210ENST00000478282 TSHBP01222 138 aa11.22□□□□□ -0.61
U2AF1-210ENST00000478282 ZFP36P26651 326 aaKnown RBP11.22□□□□□ -0.61
U2AF1-210ENST00000478282 OR10J6PQ8NGY7 276 aa11.22□□□□□ -0.61
U2AF1-210ENST00000478282 SIRPDQ9H106 197 aa11.22□□□□□ -0.61
U2AF1-210ENST00000478282 C11orf71Q6IPW1 123 aa11.22□□□□□ -0.61
U2AF1-210ENST00000478282 IGHV3-30P01768 117 aa11.21□□□□□ -0.61
U2AF1-210ENST00000478282 CFC1BP0CG36 223 aa11.21□□□□□ -0.61
U2AF1-210ENST00000478282 CFC1P0CG37 223 aa11.21□□□□□ -0.61
U2AF1-210ENST00000478282 IGHV3-30-5P0DP03 117 aa11.21□□□□□ -0.61
U2AF1-210ENST00000478282 POM121L12Q8N7R1 296 aa11.21□□□□□ -0.61
U2AF1-210ENST00000478282 AJUBAQ96IF1 538 aa11.21□□□□□ -0.61
U2AF1-210ENST00000478282 TP53TG1Q9Y2A0 90 aa11.21□□□□□ -0.61
U2AF1-210ENST00000478282 A8MWV9 139 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms