RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 H3BUA1 57 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 NDUFS8O00217 210 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 LY6G6DO95868 133 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV1-69P01742 117 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 ORM1P02763 201 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 IFI27P40305 119 aaPredicted RBP3.77□□□□□ -1.81
SF3B6-202ENST00000478050 TFPI2P48307 235 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 HINT1P49773 126 aaPredicted RBP3.77□□□□□ -1.81
SF3B6-202ENST00000478050 BEAN1Q3B7T3 259 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 PSMG4Q5JS54 123 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 TMEM78Q5T7P6 136 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 C12orf54Q6X4T0 127 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 C9orf47Q6ZRZ4 202 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 C9orf139Q6ZV77 190 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 SMIM15Q7Z3B0 74 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 OR1N2Q8NGR9 330 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 ORAOV1Q8WV07 137 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 GLMPQ8WWB7 406 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 MAP1LC3AQ9H492 121 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 SCRT2Q9NQ03 307 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 LENEPQ9Y5L5 61 aa3.77□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV3OR16-8A0A075B7F1 116 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 A0A096LNJ9 63 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 TRAV8-2A0A0B4J237 113 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV3-35A0A0C4DH35 117 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 GAGE10A6NGK3 116 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 LINC01546A6NGU7 62 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 PRAC2D3DTV9 90 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 H0Y8G0 127 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 C19orf84I3L1E1 186 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 NDUFA4O00483 81 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 TCF21O43680 179 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 NPYP01303 97 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV4-39P01824 125 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 TRGV3P03979 118 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 NPSP0C0P6 89 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 PRB4P10163 310 aaPredicted RBP3.76□□□□□ -1.81
SF3B6-202ENST00000478050 COX8AP10176 69 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
SF3B6-202ENST00000478050 CACNG7P62955 275 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 ERCC8Q13216 396 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 CLEC2AQ6UVW9 174 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 IL17RELQ6ZVW7 336 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 RNF182Q8N6D2 247 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 ZNF738Q8NE65 137 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 RNF185Q96GF1 192 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 USMG5Q96IX5 58 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 AGPAT4-IT1Q9H0P7 198 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 NXT2Q9NPJ8 142 aaKnown RBP3.76□□□□□ -1.81
SF3B6-202ENST00000478050 TIMM8BQ9Y5J9 83 aaPredicted RBP3.76□□□□□ -1.81
SF3B6-202ENST00000478050 COX11Q9Y6N1 276 aa3.76□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV4-4A0A075B6R2 117 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 TRAV40A0A0B4J280 105 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 IGKV3D-20A0A0C4DH25 116 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV3-66A0A0C4DH42 116 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 A6NDX4 124 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 LINC01548A6NM66 108 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 SMKR1H3BMG3 65 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 OVOL1O14753 267 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 SNAI2O43623 268 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 CRLF1O75462 422 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 NCR2O95944 276 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 IGHG2P01859 326 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 IGF1P05019 195 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 FCER1GP30273 86 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 LOXL1Q08397 574 aaPredicted RBP3.75□□□□□ -1.81
SF3B6-202ENST00000478050 BVES-AS1Q5T3Y7 98 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 TMEM219Q86XT9 240 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 Q8N8P6 123 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 OR8A1Q8NGG7 326 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 C10orf105Q8TEF2 133 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 IFI27L1Q96BM0 104 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 LINC00477Q96M19 166 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 CCL19Q99731 98 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 PEMTQ9UBM1 199 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 ZNF580Q9UK33 172 aa3.75□□□□□ -1.81
SF3B6-202ENST00000478050 HRNRQ86YZ3 2850 aaPredicted RBP3.74□□□□□ -1.81
SF3B6-202ENST00000478050 ZANQ9Y493 2812 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV3OR16-13A0A075B7E8 117 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV3OR16-10A0A075B7F0 116 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV3-49A0A0A0MS15 119 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV3-74A0A0B4J1X5 117 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV4-61A0A0C4DH41 118 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 MUC21A0A0G2JKD1 596 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 IGHV7-4-1A0A0J9YVY3 117 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 TRBV7-9A0A0J9YWB2 115 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 MUC21A0A140T8X8 626 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 SIVA1O15304 175 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 ZNF207O43670 478 aaKnown RBP3.74□□□□□ -1.81
SF3B6-202ENST00000478050 CD5LO43866 347 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 ATP5LO75964 103 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 UBE2V1Q13404 147 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 FAM106AQ4KMX7 169 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 MPV17L2Q567V2 206 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 MUC21Q5SSG8 566 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 SAMD13Q5VXD3 122 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 PRSS57Q6UWY2 283 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 DEFB125Q8N687 156 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 OR9G4Q8NGQ1 327 aa3.74□□□□□ -1.81
SF3B6-202ENST00000478050 OR10J6PQ8NGY7 276 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms