RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 SSMEM1Q8WWF3 244 aa4.57□□□□□ -1.68
TRA2B-211ENST00000477939 GFI1Q99684 422 aa4.57□□□□□ -1.68
TRA2B-211ENST00000477939 DAZ1Q9NQZ3 744 aaKnown RBP4.57□□□□□ -1.68
TRA2B-211ENST00000477939 PRR13Q9NZ81 148 aa4.57□□□□□ -1.68
TRA2B-211ENST00000477939 IGHV3OR15-7A0A075B7D8 119 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 TRBV5-7A0A0A0MS05 114 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 IGHV1-69DA0A0B4J2H0 117 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 NCBP2LA6PVI3 153 aaKnown RBP4.56□□□□□ -1.68
TRA2B-211ENST00000477939 TIMM23O14925 209 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 LHBP01229 141 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 NPYP01303 97 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 IGHV1-69P01742 117 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 IGHV4-59P01825 116 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 GCHFRP30047 84 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 ARL16Q0P5N6 197 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 ZNF493Q6ZR52 646 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 LINC00305Q7Z4B0 112 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 FAM19A2Q8N3H0 131 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 PIP4P2Q8N4L2 257 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 POM121L12Q8N7R1 296 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 SPTSSAQ969W0 71 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 TMEM230Q96A57 120 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 EEF1AKMT3Q96AZ1 226 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 ZC2HC1AQ96GY0 325 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 C18orf15Q96N68 181 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 TRGV9Q99603 122 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 OTORQ9NRC9 128 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 OSTCQ9NRP0 149 aa4.56□□□□□ -1.68
TRA2B-211ENST00000477939 NHP2Q9NX24 153 aaKnown RBP4.56□□□□□ -1.68
TRA2B-211ENST00000477939 LSM4Q9Y4Z0 139 aaKnown RBP4.56□□□□□ -1.68
TRA2B-211ENST00000477939 MYMXA0A1B0GTQ4 84 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 TCRBV4S1A1TA0A5B7 111 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 CLPSL1A2RUU4 121 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 PGPA6NDG6 321 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 CRYM-AS1A6NIL9 109 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 LGALS9O00182 355 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 PIN1P1O15428 100 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 NDUFB3O43676 98 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 ELANEP08246 267 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 ZNF823P16415 610 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 PROK1P58294 105 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 SUPT4H1P63272 117 aaKnown RBP4.55□□□□□ -1.68
TRA2B-211ENST00000477939 PRB3Q04118 309 aaPredicted RBP4.55□□□□□ -1.68
TRA2B-211ENST00000477939 DAZ2Q13117 558 aaKnown RBP4.55□□□□□ -1.68
TRA2B-211ENST00000477939 WDR38Q5JTN6 314 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 VMO1Q7Z5L0 202 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 DAZ4Q86SG3 579 aaKnown RBP4.55□□□□□ -1.68
TRA2B-211ENST00000477939 LINC00643Q86TS7 51 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 TMEM252Q8N6L7 170 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 SERP2Q8N6R1 65 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 FAM216BQ8N7L0 139 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 OR5C1Q8NGR4 320 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 LINC01006Q8NI28 216 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 SRSF12Q8WXF0 261 aaKnown RBP4.55□□□□□ -1.68
TRA2B-211ENST00000477939 FAM19A4Q96LR4 140 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 IGF2BP2-AS1Q96M15 143 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 CHAC1Q9BUX1 264 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 NXT2Q9NPJ8 142 aaKnown RBP4.55□□□□□ -1.68
TRA2B-211ENST00000477939 DAZ3Q9NR90 486 aaKnown RBP4.55□□□□□ -1.68
TRA2B-211ENST00000477939 KAAG1Q9UBP8 84 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 EPDR1Q9UM22 224 aa4.55□□□□□ -1.68
TRA2B-211ENST00000477939 AMMECR1Q9Y4X0 333 aaPredicted RBP4.55□□□□□ -1.68
TRA2B-211ENST00000477939 TRGV11A0A075B6L2 103 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 IGHV1-58A0A0C4DH39 117 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 UBE2L5PA0A1B0GUS4 154 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 PLAC8L1A1L4L8 177 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 C11orf94C9JXX5 98 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 MRPS12O15235 138 aaKnown RBP4.54□□□□□ -1.68
TRA2B-211ENST00000477939 SYNGR2O43760 224 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 NDUFS5O43920 106 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 UBE2E1P51965 193 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 SUB1P53999 127 aaKnown RBP eCLIP4.54□□□□□ -1.68
TRA2B-211ENST00000477939 APOC4P55056 127 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 DAD1P61803 113 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 LINC01590Q5TEZ4 76 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 Q6ZSV7 163 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 LY6G5BQ8NDX9 201 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 IFI27L1Q96BM0 104 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 UBE2E2Q96LR5 201 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 ODF3Q96PU9 254 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 CCL13Q99616 98 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 FGF23Q9GZV9 251 aaPredicted RBP4.54□□□□□ -1.68
TRA2B-211ENST00000477939 DPH3P1Q9H4G8 78 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 ZNRD1Q9P1U0 126 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 LINC00527Q9UJ94 153 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 F11RQ9Y624 299 aaKnown RBP4.54□□□□□ -1.68
TRA2B-211ENST00000477939 U3KQE9 123 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 NOTCH3Q9UM47 2321 aa4.54□□□□□ -1.68
TRA2B-211ENST00000477939 TET2Q6N021 2002 aaPredicted RBP4.53□□□□□ -1.68
TRA2B-211ENST00000477939 SMKR1H3BMG3 65 aa4.53□□□□□ -1.68
TRA2B-211ENST00000477939 TCL1BO95988 128 aa4.53□□□□□ -1.68
TRA2B-211ENST00000477939 PPYP01298 95 aa4.53□□□□□ -1.68
TRA2B-211ENST00000477939 TFF1P04155 84 aa4.53□□□□□ -1.68
TRA2B-211ENST00000477939 LGALS3P17931 250 aaKnown RBP4.53□□□□□ -1.68
TRA2B-211ENST00000477939 SMCPP49901 116 aaPredicted RBP4.53□□□□□ -1.68
TRA2B-211ENST00000477939 DYNLT3P51808 116 aa4.53□□□□□ -1.68
TRA2B-211ENST00000477939 UBE2D3P61077 147 aa4.53□□□□□ -1.68
TRA2B-211ENST00000477939 ERVK-16P61578 105 aa4.53□□□□□ -1.68
TRA2B-211ENST00000477939 UBE2D2P62837 147 aa4.53□□□□□ -1.68
TRA2B-211ENST00000477939 RPL11P62913 178 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms