RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 PPP1R14DQ9NXH3 145 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 HLA-DRB4X5D2U9 266 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 LRP2P98164 4655 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 DNAH8Q96JB1 4490 aa6.76□□□□□ -1.33
SMARCB1-206ENST00000477836 SMIM9A6NGZ8 99 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 K7EN84 100 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 MT-ND4LP03901 98 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 DAD1P61803 113 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 GDF5OSQ5U4N7 250 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 CDPF1Q6NVV7 123 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 OR4B1Q8NGF8 309 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 ZC2HC1AQ96GY0 325 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 C8orf49Q96NF6 230 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 ODF3Q96PU9 254 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 MLST8Q9BVC4 326 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 ZNF492Q9P255 531 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 LENEPQ9Y5L5 61 aa6.75□□□□□ -1.33
SMARCB1-206ENST00000477836 TRBV7-9A0A0J9YWB2 115 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 C7orf77A4D0Y5 90 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 EREGO14944 169 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 PPP1R2P9O14990 202 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 GCGP01275 180 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 IGKV3-20P01619 116 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 LEPP41159 167 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 ERVFC1-1P60608 527 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 OR5I1Q13606 314 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 SMUG1Q53HV7 270 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 IBA57Q5T440 356 aaKnown RBP6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 C15orf54Q8N8G6 183 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 SFRP2Q96HF1 295 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 RPS10P5Q9NQ39 176 aa6.74□□□□□ -1.33
SMARCB1-206ENST00000477836 A0A087WWC5 75 aa6.73□□□□□ -1.33
SMARCB1-206ENST00000477836 H7BYZ3 331 aa6.73□□□□□ -1.33
SMARCB1-206ENST00000477836 CRISP2P16562 243 aa6.73□□□□□ -1.33
SMARCB1-206ENST00000477836 TSPOP30536 169 aa6.73□□□□□ -1.33
SMARCB1-206ENST00000477836 FAM162BQ5T6X4 162 aa6.73□□□□□ -1.33
SMARCB1-206ENST00000477836 ATRAIDQ6UW56 229 aa6.73□□□□□ -1.33
SMARCB1-206ENST00000477836 COX8CQ7Z4L0 72 aa6.73□□□□□ -1.33
SMARCB1-206ENST00000477836 DAZAP1Q96EP5 407 aaKnown RBP6.73□□□□□ -1.33
SMARCB1-206ENST00000477836 FAM19A4Q96LR4 140 aa6.73□□□□□ -1.33
SMARCB1-206ENST00000477836 CTDSP1Q9GZU7 261 aa6.73□□□□□ -1.33
SMARCB1-206ENST00000477836 RNASE7Q9H1E1 156 aaKnown RBP6.73□□□□□ -1.33
SMARCB1-206ENST00000477836 PKHD1L1Q86WI1 4243 aa6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 H3BMM0 161 aa6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 J3KRW8 73 aa6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 SH2D1AO60880 128 aa6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 P01737 135 aa6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 GPX1P07203 203 aa6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 PFN1P07737 140 aaKnown RBP6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 FAM231DQ6ZW35 169 aa6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 ZFAND2AQ8N6M9 145 aa6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 OR10G8Q8NGN5 311 aa6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 ANAPC16Q96DE5 110 aa6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 RPP21Q9H633 154 aaKnown RBP6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 OSTCQ9NRP0 149 aa6.72□□□□□ -1.33
SMARCB1-206ENST00000477836 C7orf71A4D174 169 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 C19orf71A6NCJ1 209 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 A8MTW9 85 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 ZNF705GA8MUZ8 300 aaPredicted RBP6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 KLLNB2CW77 178 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 M0R2Z0 102 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 GATCO43716 136 aaKnown RBP6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 SCO1O75880 301 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 CDKN1BP46527 198 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 FXYD7P58549 80 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 LINC00315P59091 139 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 BTN1A1Q13410 526 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 SPINK13Q1W4C9 94 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 PRR9Q5T870 116 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 AMTNQ6UX39 209 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 DEFB104AQ8WTQ1 72 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 CLUHP3Q96NS8 147 aa6.71□□□□□ -1.34
SMARCB1-206ENST00000477836 TRAV21A0A0B4J279 112 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 A0A1W2PPQ1 181 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 FABP5P3A8MUU1 101 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 F5H768 121 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 INSP01308 110 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 GCSHP23434 173 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 S100PP25815 95 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 RNASE4P34096 147 aaKnown RBP6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 ZNF80P51504 273 aaPredicted RBP6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 CT83Q5H943 113 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 GFI1BQ5VTD9 330 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 Q6ZRN7 208 aaPredicted RBP6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 CBLN2Q8IUK8 224 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 NUDT10Q8NFP7 164 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 OR2D3Q8NGH3 330 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 NUDT11Q96G61 164 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 SMCO4Q9NRQ5 59 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 TMEM242Q9NWH2 141 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 V9GYV3 84 aa6.7□□□□□ -1.34
SMARCB1-206ENST00000477836 TRAV12-2A0A075B6T6 113 aa6.69□□□□□ -1.34
SMARCB1-206ENST00000477836 XKRY2A2RUG3 117 aa6.69□□□□□ -1.34
SMARCB1-206ENST00000477836 PLA2G1BP04054 148 aaKnown RBP6.69□□□□□ -1.34
SMARCB1-206ENST00000477836 CRIP1P50238 77 aa6.69□□□□□ -1.34
SMARCB1-206ENST00000477836 Q6AWC8 147 aa6.69□□□□□ -1.34
SMARCB1-206ENST00000477836 KCNIP4Q6PIL6 250 aa6.69□□□□□ -1.34
SMARCB1-206ENST00000477836 NAGKQ9UJ70 344 aa6.69□□□□□ -1.34
SMARCB1-206ENST00000477836 TMSB15BA0A087X1C1 80 aa6.68□□□□□ -1.34
SMARCB1-206ENST00000477836 TRAV12-3A0A0B4J271 114 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms