RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 PIK3CD-AS1Q5SR53 167 aa5.91□□□□□ -1.46
VMA21-203ENST00000477649 PRR9Q5T870 116 aa5.91□□□□□ -1.46
VMA21-203ENST00000477649 C18orf65Q6ZTR6 163 aa5.91□□□□□ -1.46
VMA21-203ENST00000477649 TMEM61Q8N0U2 210 aa5.91□□□□□ -1.46
VMA21-203ENST00000477649 SYT8Q8NBV8 401 aa5.91□□□□□ -1.46
VMA21-203ENST00000477649 AP1S3Q96PC3 154 aa5.91□□□□□ -1.46
VMA21-203ENST00000477649 CITED2Q99967 270 aaPredicted RBP5.91□□□□□ -1.46
VMA21-203ENST00000477649 LINC00467Q9BRT7 94 aa5.91□□□□□ -1.46
VMA21-203ENST00000477649 DPH3P1Q9H4G8 78 aa5.91□□□□□ -1.46
VMA21-203ENST00000477649 HIVEP1P15822 2718 aa5.91□□□□□ -1.46
VMA21-203ENST00000477649 ZNF469Q96JG9 3925 aaPredicted RBP5.91□□□□□ -1.46
VMA21-203ENST00000477649 IGHV1OR15-1A0A075B7D0 117 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 LINC01546A6NGU7 62 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 LINC01549A6NIU2 74 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 H3BMM0 161 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 H3BVH4 76 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 CRXO43186 299 aaPredicted RBP5.9□□□□□ -1.46
VMA21-203ENST00000477649 LEPROTL1O95214 131 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 SMIM17P0DL12 118 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 PRB4P10163 310 aaPredicted RBP5.9□□□□□ -1.46
VMA21-203ENST00000477649 BTF3P20290 206 aaKnown RBP5.9□□□□□ -1.46
VMA21-203ENST00000477649 G0S2P27469 103 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 DEFB131AP59861 70 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 AMTNQ6UX39 209 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 TEX43Q6ZNM6 134 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 PTH2Q96A98 100 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 RNF185Q96GF1 192 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 C20orf78Q9BR46 151 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 NDUFAF3Q9BU61 184 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 TMEM70Q9BUB7 260 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 F8P00451 2351 aa5.9□□□□□ -1.46
VMA21-203ENST00000477649 VPS13CQ709C8 3753 aa5.9□□□□□ -1.47
VMA21-203ENST00000477649 IGHV1-24A0A0C4DH33 117 aa5.89□□□□□ -1.47
VMA21-203ENST00000477649 CRLF1O75462 422 aa5.89□□□□□ -1.47
VMA21-203ENST00000477649 CD7P09564 240 aa5.89□□□□□ -1.47
VMA21-203ENST00000477649 RNASE3P12724 160 aaKnown RBP5.89□□□□□ -1.47
VMA21-203ENST00000477649 KRTDAPP60985 99 aa5.89□□□□□ -1.47
VMA21-203ENST00000477649 NUTF2P61970 127 aaKnown RBP5.89□□□□□ -1.47
VMA21-203ENST00000477649 CD300EQ496F6 205 aaPredicted RBP5.89□□□□□ -1.47
VMA21-203ENST00000477649 PET117Q6UWS5 81 aa5.89□□□□□ -1.47
VMA21-203ENST00000477649 SPATA12Q7Z6I5 190 aa5.89□□□□□ -1.47
VMA21-203ENST00000477649 POM121L12Q8N7R1 296 aa5.89□□□□□ -1.47
VMA21-203ENST00000477649 URB1-AS1Q96HZ7 61 aa5.89□□□□□ -1.47
VMA21-203ENST00000477649 C9orf85Q96MD7 179 aa5.89□□□□□ -1.47
VMA21-203ENST00000477649 MAP1LC3CQ9BXW4 147 aa5.89□□□□□ -1.47
VMA21-203ENST00000477649 MAP6D1Q9H9H5 199 aa5.89□□□□□ -1.47
VMA21-203ENST00000477649 ZNF256Q9Y2P7 627 aaPredicted RBP5.89□□□□□ -1.47
VMA21-203ENST00000477649 CCDC168Q8NDH2 2452 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 TRAV12-3A0A0B4J271 114 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 IGHV3-16A0A0C4DH30 117 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 PCP4L1A6NKN8 68 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 OR11H12B2RN74 326 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 J3KRW8 73 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 TNFRSF6BO95407 300 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 HBDP02042 147 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 C3orf79P0CE67 100 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 CD33P20138 364 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 EVI2AP22794 236 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 INSL3P51460 131 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 RPL32P62910 135 aaKnown RBP5.88□□□□□ -1.47
VMA21-203ENST00000477649 MUC21Q5SSG8 566 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 KRTAP5-3Q6L8H2 238 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 FAM19A2Q8N3H0 131 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 Q8N8P6 123 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 VAMP8Q9BV40 100 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 MSRB1Q9NZV6 116 aa5.88□□□□□ -1.47
VMA21-203ENST00000477649 MUC21A0A0G2JKD1 596 aa5.87□□□□□ -1.47
VMA21-203ENST00000477649 MUC21A0A140T8X8 626 aa5.87□□□□□ -1.47
VMA21-203ENST00000477649 A0A1W2PRX2 142 aa5.87□□□□□ -1.47
VMA21-203ENST00000477649 TCAPO15273 167 aa5.87□□□□□ -1.47
VMA21-203ENST00000477649 GNRH2O43555 120 aa5.87□□□□□ -1.47
VMA21-203ENST00000477649 NPYP01303 97 aa5.87□□□□□ -1.47
VMA21-203ENST00000477649 INSP01308 110 aa5.87□□□□□ -1.47
VMA21-203ENST00000477649 IGLV1-51P01701 117 aa5.87□□□□□ -1.47
VMA21-203ENST00000477649 IFI27P40305 119 aaPredicted RBP5.87□□□□□ -1.47
VMA21-203ENST00000477649 DEFB1P60022 68 aa5.87□□□□□ -1.47
VMA21-203ENST00000477649 SPINK13Q1W4C9 94 aa5.87□□□□□ -1.47
VMA21-203ENST00000477649 DUX3Q96PT4 197 aa5.87□□□□□ -1.47
VMA21-203ENST00000477649 SMR3AQ99954 134 aa5.87□□□□□ -1.47
VMA21-203ENST00000477649 FLNAP21333 2647 aaKnown RBP5.86□□□□□ -1.47
VMA21-203ENST00000477649 MTORP42345 2549 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 HIVEP2P31629 2446 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 KIR2DL5BA0A0G2JN68 375 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 KIR2DL5BA0A0G2JPC4 375 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 ADARB2-AS1A8MUL3 147 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 INAFM1C9JVW0 142 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 SYS1-DBNDD2H3BUS1 97 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 SAP30O75446 220 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 FCER1GP30273 86 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 SSTP61278 116 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 ZNF415Q09FC8 603 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 ORMDL2Q53FV1 153 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 MRPL52Q86TS9 123 aaKnown RBP5.86□□□□□ -1.47
VMA21-203ENST00000477649 STHQ8IWL8 128 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 KIR2DL5AQ8N109 375 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 Q8N1Y9 231 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 ZNF664Q8N3J9 261 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 NRACQ8N912 160 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 SPXQ9BT56 116 aa5.86□□□□□ -1.47
VMA21-203ENST00000477649 C1QTNF4Q9BXJ3 329 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms