RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 DEFB114Q30KQ6 69 aa4.97□□□□□ -1.61
LDB3-206ENST00000477489 KIAA1644Q3SXP7 199 aa4.97□□□□□ -1.61
LDB3-206ENST00000477489 ADAMTSL5Q6ZMM2 481 aa4.97□□□□□ -1.61
LDB3-206ENST00000477489 DLX4Q92988 240 aaPredicted RBP4.97□□□□□ -1.61
LDB3-206ENST00000477489 MRAP2Q96G30 205 aa4.97□□□□□ -1.61
LDB3-206ENST00000477489 RAX2Q96IS3 184 aa4.97□□□□□ -1.61
LDB3-206ENST00000477489 LINC00467Q9BRT7 94 aa4.97□□□□□ -1.61
LDB3-206ENST00000477489 NDUFAF3Q9BU61 184 aa4.97□□□□□ -1.61
LDB3-206ENST00000477489 GSN-AS1Q9NRJ2 163 aa4.97□□□□□ -1.61
LDB3-206ENST00000477489 C11orf21Q9P2W6 132 aa4.97□□□□□ -1.61
LDB3-206ENST00000477489 ZANQ9Y493 2812 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 TRGV11A0A075B6L2 103 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 INAFM1C9JVW0 142 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 M0R381 172 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 NUPR1O60356 82 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 ZNF688P0C7X2 276 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 CKS2P33552 79 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 PMCHL1Q16048 86 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 ANXA2RQ3ZCQ2 193 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 MRPL51Q4U2R6 128 aaKnown RBP4.96□□□□□ -1.62
LDB3-206ENST00000477489 PRR9Q5T870 116 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 SPANXN1Q5VSR9 72 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 AMTNQ6UX39 209 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 NIT1Q86X76 327 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 POM121L12Q8N7R1 296 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 PTH2Q96A98 100 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 PRELID3AQ96N28 172 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 AP1S3Q96PC3 154 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 NXT2Q9NPJ8 142 aaKnown RBP4.96□□□□□ -1.62
LDB3-206ENST00000477489 AP5S1Q9NUS5 200 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 HSPB8Q9UJY1 196 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 PHLDA3Q9Y5J5 127 aa4.96□□□□□ -1.62
LDB3-206ENST00000477489 IGKV3-7A0A075B6H7 116 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 LINC01549A6NIU2 74 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 F6UB75 175 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 TSTD3H0UI37 97 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 H3BMM0 161 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 M0R2Z0 102 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 CRXO43186 299 aaPredicted RBP4.95□□□□□ -1.62
LDB3-206ENST00000477489 CD28P10747 220 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 RNASE4P34096 147 aaKnown RBP4.95□□□□□ -1.62
LDB3-206ENST00000477489 PKIAP61925 76 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 DEFB136Q30KP8 78 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 RNASEKQ6P5S7 137 aaKnown RBP4.95□□□□□ -1.62
LDB3-206ENST00000477489 C18orf65Q6ZTR6 163 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 Q6ZWC4 215 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 FA2HQ7L5A8 372 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 AMN1Q8IY45 258 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 TMEM61Q8N0U2 210 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 SYT8Q8NBV8 401 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 PRSS3P2Q8NHM4 247 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 RCHY1Q96PM5 261 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 CITED2Q99967 270 aaPredicted RBP4.95□□□□□ -1.62
LDB3-206ENST00000477489 MAP1LC3AQ9H492 121 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 DPH3P1Q9H4G8 78 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 NAGKQ9UJ70 344 aa4.95□□□□□ -1.62
LDB3-206ENST00000477489 MAP1AP78559 2803 aaPredicted RBP4.95□□□□□ -1.62
LDB3-206ENST00000477489 IGHV1OR15-1A0A075B7D0 117 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 C20orf202A1L168 122 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 D6R8Y8 96 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 H3BVH4 76 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 CRLF1O75462 422 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 LEPROTL1O95214 131 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 SCGB1D1O95968 90 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 ZNF705DP0CH99 300 aaPredicted RBP4.94□□□□□ -1.62
LDB3-206ENST00000477489 ZNF705BP0CI00 300 aaPredicted RBP4.94□□□□□ -1.62
LDB3-206ENST00000477489 BTF3P20290 206 aaKnown RBP4.94□□□□□ -1.62
LDB3-206ENST00000477489 EDN2P20800 178 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 G0S2P27469 103 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 TFPI2P48307 235 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 INSL3P51460 131 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 DEFB131AP59861 70 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 RPL32P62910 135 aaKnown RBP4.94□□□□□ -1.62
LDB3-206ENST00000477489 TEX43Q6ZNM6 134 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 SPATA12Q7Z6I5 190 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 OR10AG1Q8NH19 301 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 RNF185Q96GF1 192 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 URB1-AS1Q96HZ7 61 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 C9orf85Q96MD7 179 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 C20orf78Q9BR46 151 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 MAP6D1Q9H9H5 199 aa4.94□□□□□ -1.62
LDB3-206ENST00000477489 ZNF256Q9Y2P7 627 aaPredicted RBP4.94□□□□□ -1.62
LDB3-206ENST00000477489 IGHV1-24A0A0C4DH33 117 aa4.93□□□□□ -1.62
LDB3-206ENST00000477489 OR11H12B2RN74 326 aa4.93□□□□□ -1.62
LDB3-206ENST00000477489 IGLV1-51P01701 117 aa4.93□□□□□ -1.62
LDB3-206ENST00000477489 RNASE3P12724 160 aaKnown RBP4.93□□□□□ -1.62
LDB3-206ENST00000477489 NUTF2P61970 127 aaKnown RBP4.93□□□□□ -1.62
LDB3-206ENST00000477489 CD300EQ496F6 205 aaPredicted RBP4.93□□□□□ -1.62
LDB3-206ENST00000477489 PET117Q6UWS5 81 aa4.93□□□□□ -1.62
LDB3-206ENST00000477489 Q8N8P6 123 aa4.93□□□□□ -1.62
LDB3-206ENST00000477489 TMEM158Q8WZ71 300 aa4.93□□□□□ -1.62
LDB3-206ENST00000477489 TMEM70Q9BUB7 260 aa4.93□□□□□ -1.62
LDB3-206ENST00000477489 EDA2RQ9HAV5 297 aa4.93□□□□□ -1.62
LDB3-206ENST00000477489 MXRA5Q9NR99 2828 aa4.93□□□□□ -1.62
LDB3-206ENST00000477489 ANK3Q12955 4377 aaKnown RBP4.92□□□□□ -1.62
LDB3-206ENST00000477489 TRAV12-3A0A0B4J271 114 aa4.92□□□□□ -1.62
LDB3-206ENST00000477489 IGHV3-16A0A0C4DH30 117 aa4.92□□□□□ -1.62
LDB3-206ENST00000477489 TCAPO15273 167 aa4.92□□□□□ -1.62
LDB3-206ENST00000477489 TNFRSF6BO95407 300 aa4.92□□□□□ -1.62
LDB3-206ENST00000477489 INSP01308 110 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms