RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CIDEAO60543 219 aa4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 IGLV2-11P01706 119 aa4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 H2AFB2P0C5Z0 115 aa4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 S100A4P26447 101 aaKnown RBP4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 ASAH1Q13510 395 aa4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 LGALSLQ3ZCW2 172 aaPredicted RBP4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 TMEM75Q8N9X5 138 aa4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 SCGB1C1Q8TD33 95 aa4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 TMED6Q8WW62 240 aa4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 UBE2WQ96B02 151 aa4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 DNAJC30Q96LL9 226 aa4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 SDHCQ99643 169 aaPredicted RBP4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 SMIM3Q9BZL3 60 aa4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 WDR61Q9GZS3 305 aaKnown RBP4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 OTORQ9NRC9 128 aa4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 KLK12Q9UKR0 248 aa4.38□□□□□ -1.71
RTFDC1-206ENST00000477485 A0A087WX48 190 aa4.37□□□□□ -1.71
RTFDC1-206ENST00000477485 A0A1W2PPV4 95 aa4.37□□□□□ -1.71
RTFDC1-206ENST00000477485 HMGB3O15347 200 aaKnown RBP4.37□□□□□ -1.71
RTFDC1-206ENST00000477485 SIX6O95475 246 aa4.37□□□□□ -1.71
RTFDC1-206ENST00000477485 GCGP01275 180 aa4.37□□□□□ -1.71
RTFDC1-206ENST00000477485 SEC11BP0C7V7 166 aa4.37□□□□□ -1.71
RTFDC1-206ENST00000477485 FAM74A4Q5TZK3 123 aa4.37□□□□□ -1.71
RTFDC1-206ENST00000477485 CYB561D1Q8N8Q1 229 aa4.37□□□□□ -1.71
RTFDC1-206ENST00000477485 TVP23CQ96ET8 276 aa4.37□□□□□ -1.71
RTFDC1-206ENST00000477485 OR5AC2Q9NZP5 309 aa4.37□□□□□ -1.71
RTFDC1-206ENST00000477485 A0A087WWC5 75 aa4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 FAM240BA0A1B0GVZ2 78 aa4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 K7EQM0 130 aa4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 TAAR5O14804 337 aa4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 PLA2G10O15496 165 aa4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 HLA-DQA1P01909 254 aa4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 CRPP02741 224 aa4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 ZNF80P51504 273 aaPredicted RBP4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 KRTAP10-4P60372 401 aaPredicted RBP4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 PRNTQ86SH4 94 aa4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 C9orf85Q96MD7 179 aa4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 SAMD10Q9BYL1 202 aa4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 PARLQ9H300 379 aa4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 C11orf21Q9P2W6 132 aa4.36□□□□□ -1.71
RTFDC1-206ENST00000477485 RNF222A6NCQ9 220 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 A8MWV9 139 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 TMEM262E9PQX1 116 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 HNRNPA3P51991 378 aaKnown RBP4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 FGF8P55075 233 aaPredicted RBP4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 IL15RAQ13261 267 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 ELOBQ15370 118 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 C14orf177Q52M58 125 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 SMUG1Q53HV7 270 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 PQLC2Q6ZP29 291 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 NIT1Q86X76 327 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 C14orf178Q8N769 122 aaPredicted RBP4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 OR2G3Q8NGZ4 309 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 C1orf43Q9BWL3 253 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 DPH3P1Q9H4G8 78 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 JPT2Q9H910 190 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 PSG8Q9UQ74 426 aa4.35□□□□□ -1.71
RTFDC1-206ENST00000477485 H3BVH4 76 aa4.34□□□□□ -1.71
RTFDC1-206ENST00000477485 ARL14EPLP0DKL9 152 aa4.34□□□□□ -1.71
RTFDC1-206ENST00000477485 RNASE3P12724 160 aaKnown RBP4.34□□□□□ -1.71
RTFDC1-206ENST00000477485 ASIPP42127 132 aa4.34□□□□□ -1.71
RTFDC1-206ENST00000477485 RAB2AP61019 212 aa4.34□□□□□ -1.71
RTFDC1-206ENST00000477485 MZT2BQ6NZ67 158 aa4.34□□□□□ -1.71
RTFDC1-206ENST00000477485 ZFP2Q6ZN57 461 aa4.34□□□□□ -1.71
RTFDC1-206ENST00000477485 C15orf54Q8N8G6 183 aa4.34□□□□□ -1.71
RTFDC1-206ENST00000477485 DAZAP1Q96EP5 407 aaKnown RBP4.34□□□□□ -1.71
RTFDC1-206ENST00000477485 DPH3Q96FX2 82 aa4.34□□□□□ -1.71
RTFDC1-206ENST00000477485 SSBP4Q9BWG4 385 aaPredicted RBP4.34□□□□□ -1.71
RTFDC1-206ENST00000477485 Q9UF83 564 aa4.34□□□□□ -1.71
RTFDC1-206ENST00000477485 A0A087WWL8 130 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 SERTM2A0A1B0GWG4 89 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 H0YIZ8 118 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 M0R036 132 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 ANGP03950 147 aaKnown RBP4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 TCRAP04437 139 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 LINC00694P0DN24 101 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 CDC34P49427 236 aaPredicted RBP4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 CYCSP99999 105 aaKnown RBP4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 FLI1Q01543 452 aaPredicted RBP4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 Q0VG73 95 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 CLPSL2Q6UWE3 100 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 C5orf17Q8NAS9 161 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 OR10G9Q8NGN4 311 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 OR10G7Q8NGN6 311 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 ENKURQ8TC29 256 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 ZC2HC1AQ96GY0 325 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 RBM38Q9H0Z9 239 aaKnown RBP4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 HSPB11Q9Y547 144 aa4.33□□□□□ -1.72
RTFDC1-206ENST00000477485 TRAV34A0A0B4J273 112 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 A0A0D9SG52 128 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 GRIFINA4D1Z8 144 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 B4DEV8 164 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 USP17L23D6RBM5 183 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 M0R381 172 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 RHODO00212 210 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 PET100P0DJ07 73 aa4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 RPL12P30050 165 aaKnown RBP4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 SUMO1P63165 101 aaKnown RBP4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 RPL36AP83881 106 aaKnown RBP4.32□□□□□ -1.72
RTFDC1-206ENST00000477485 SAPCD1Q5SSQ6 148 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms