RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 OR10J4P0C629 311 aa4.92□□□□□ -1.62
BRCA1-214ENST00000477152 MUC21Q5SSG8 566 aa4.92□□□□□ -1.62
BRCA1-214ENST00000477152 LINC00299Q6ZSB3 139 aa4.92□□□□□ -1.62
BRCA1-214ENST00000477152 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
BRCA1-214ENST00000477152 THAP6Q8TBB0 222 aa4.92□□□□□ -1.62
BRCA1-214ENST00000477152 SDHCQ99643 169 aaPredicted RBP4.92□□□□□ -1.62
BRCA1-214ENST00000477152 TMEM70Q9BUB7 260 aa4.92□□□□□ -1.62
BRCA1-214ENST00000477152 NAGKQ9UJ70 344 aa4.92□□□□□ -1.62
BRCA1-214ENST00000477152 IGHV3-38A0A0C4DH36 116 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 hDV102S1A0JD36 115 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 FBLL1A6NHQ2 334 aaKnown RBP4.91□□□□□ -1.62
BRCA1-214ENST00000477152 SEC11BP0C7V7 166 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 IL15RAQ13261 267 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 ACOT6Q3I5F7 207 aaPredicted RBP4.91□□□□□ -1.62
BRCA1-214ENST00000477152 FFAR4Q5NUL3 377 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 FXYD5Q96DB9 178 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 FAM167A-AS1Q96KT0 104 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 OTORQ9NRC9 128 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 RHOHQ15669 191 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 ZFP69Q49AA0 526 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 OR10J3Q5JRS4 329 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 Q8TAT8 98 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 PHYHIPLQ96FC7 376 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 ZNF479Q96JC4 524 aa4.91□□□□□ -1.62
BRCA1-214ENST00000477152 PGPA6NDG6 321 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 C1QBP02746 253 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 SFTA3P0C7M3 94 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 LINC01556Q5JQF7 62 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 GCSAMLQ5JQS6 135 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 PRR9Q5T870 116 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 WFDC10BQ8IUB3 73 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 PRR26Q8N8Z3 221 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 ASB13Q8WXK3 278 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 HYLS1Q96M11 299 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 TREM1Q9NP99 234 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 MDFICQ9P1T7 246 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 MBD2Q9UBB5 411 aa4.9□□□□□ -1.63
BRCA1-214ENST00000477152 TRBV6-4A0A1B0GX49 114 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 IBA57-AS1B1ANH7 110 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 TAAR5O14804 337 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 XGP55808 180 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 LRRC37A5PQ49AS3 106 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 RMI2Q96E14 147 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 RPH3ALQ9UNE2 315 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 TRAV8-3A0A0A6YYJ7 113 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 ASAH1Q13510 395 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 LAGE3Q14657 143 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 WDR73Q6P4I2 378 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 HSPB11Q9Y547 144 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 TNFRSF18Q9Y5U5 241 aa4.89□□□□□ -1.63
BRCA1-214ENST00000477152 IGHV3-16A0A0C4DH30 117 aa4.88□□□□□ -1.63
BRCA1-214ENST00000477152 MGST1P10620 155 aaKnown RBP4.88□□□□□ -1.63
BRCA1-214ENST00000477152 GATA1P15976 413 aaPredicted RBP4.88□□□□□ -1.63
BRCA1-214ENST00000477152 KRTAP10-1P60331 282 aa4.88□□□□□ -1.63
BRCA1-214ENST00000477152 LELP1Q5T871 98 aa4.88□□□□□ -1.63
BRCA1-214ENST00000477152 KCNIP4Q6PIL6 250 aa4.88□□□□□ -1.63
BRCA1-214ENST00000477152 PAM16Q9Y3D7 125 aa4.88□□□□□ -1.63
BRCA1-214ENST00000477152 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
BRCA1-214ENST00000477152 A0A087WWC5 75 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 SSNA1O43805 119 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 MBP02144 154 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 RPL12P30050 165 aaKnown RBP4.87□□□□□ -1.63
BRCA1-214ENST00000477152 FGF8P55075 233 aaPredicted RBP4.87□□□□□ -1.63
BRCA1-214ENST00000477152 DEFA1P59665 94 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 DEFA3P59666 94 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 ZNF876PQ49A33 203 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 SAPCD1Q5SSQ6 148 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 GOLT1AQ6ZVE7 132 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 Q8N814 137 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 ATP6V0E2Q8NHE4 81 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 PTH2Q96A98 100 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 GTSF1LQ9H1H1 148 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 OR5AC2Q9NZP5 309 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 URGCP-MRPS24S4R325 110 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 GGTLC3B5MD39 225 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 INMT-MINDY4F8WBC2 141 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 GNRH2O43555 120 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 TYMSP04818 313 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 SMUG1Q53HV7 270 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 C5orf17Q8NAS9 161 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 PPP1R1CQ8WVI7 109 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 Q9HAA7 133 aa4.87□□□□□ -1.63
BRCA1-214ENST00000477152 HSPG2P98160 4391 aa4.86□□□□□ -1.63
BRCA1-214ENST00000477152 A8MWV9 139 aa4.86□□□□□ -1.63
BRCA1-214ENST00000477152 RS1O15537 224 aa4.86□□□□□ -1.63
BRCA1-214ENST00000477152 SIX6O95475 246 aa4.86□□□□□ -1.63
BRCA1-214ENST00000477152 SMR3BP02814 79 aaPredicted RBP4.86□□□□□ -1.63
BRCA1-214ENST00000477152 S100A4P26447 101 aaKnown RBP4.86□□□□□ -1.63
BRCA1-214ENST00000477152 ELOBQ15370 118 aa4.86□□□□□ -1.63
BRCA1-214ENST00000477152 SLC25A29Q8N8R3 303 aa4.86□□□□□ -1.63
BRCA1-214ENST00000477152 OR10G9Q8NGN4 311 aa4.86□□□□□ -1.63
BRCA1-214ENST00000477152 OR10G7Q8NGN6 311 aa4.86□□□□□ -1.63
BRCA1-214ENST00000477152 TMEM167BQ9NRX6 74 aa4.86□□□□□ -1.63
BRCA1-214ENST00000477152 MPC2O95563 127 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 CDC34P49427 236 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-214ENST00000477152 ZFP2Q6ZN57 461 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 Q6ZQT7 251 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-214ENST00000477152 TRAV8-1A0A0A6YYK1 113 aa4.85□□□□□ -1.63
BRCA1-214ENST00000477152 LRCOL1A6NCL2 159 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 264.2 ms