RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 M0R381 172 aa8.57□□□□□ -1.04
NUP188-205ENST00000477069 TFPI2P48307 235 aa8.57□□□□□ -1.04
NUP188-205ENST00000477069 HIST2H2BCQ6DN03 193 aa8.57□□□□□ -1.04
NUP188-205ENST00000477069 DPF1Q92782 380 aa8.57□□□□□ -1.04
NUP188-205ENST00000477069 DPH3P1Q9H4G8 78 aa8.57□□□□□ -1.04
NUP188-205ENST00000477069 HSBP1L1C9JCN9 74 aa8.56□□□□□ -1.04
NUP188-205ENST00000477069 S100A4P26447 101 aaKnown RBP8.56□□□□□ -1.04
NUP188-205ENST00000477069 SNRPD3P62318 126 aaKnown RBP8.56□□□□□ -1.04
NUP188-205ENST00000477069 TMEM208Q9BTX3 173 aa8.56□□□□□ -1.04
NUP188-205ENST00000477069 PHLDA3Q9Y5J5 127 aa8.56□□□□□ -1.04
NUP188-205ENST00000477069 CUBNO60494 3623 aa8.56□□□□□ -1.04
NUP188-205ENST00000477069 NAV2Q8IVL1 2488 aa8.56□□□□□ -1.04
NUP188-205ENST00000477069 C7orf71A4D174 169 aa8.56□□□□□ -1.04
NUP188-205ENST00000477069 CD5LO43866 347 aa8.56□□□□□ -1.04
NUP188-205ENST00000477069 SLURP1P55000 103 aa8.56□□□□□ -1.04
NUP188-205ENST00000477069 DEFB136Q30KP8 78 aa8.56□□□□□ -1.04
NUP188-205ENST00000477069 KIF25-AS1Q9Y6Z4 181 aa8.56□□□□□ -1.04
NUP188-205ENST00000477069 ANK3Q12955 4377 aaKnown RBP8.56□□□□□ -1.04
NUP188-205ENST00000477069 DLEU1O43261 78 aa8.55□□□□□ -1.04
NUP188-205ENST00000477069 STPG4Q8N801 248 aa8.55□□□□□ -1.04
NUP188-205ENST00000477069 C4orf3Q8WVX3 66 aa8.55□□□□□ -1.04
NUP188-205ENST00000477069 RASL10AQ92737 203 aa8.55□□□□□ -1.04
NUP188-205ENST00000477069 PLA2G2AP14555 144 aa8.55□□□□□ -1.04
NUP188-205ENST00000477069 KRTAP1-1Q07627 177 aa8.55□□□□□ -1.04
NUP188-205ENST00000477069 C14orf178Q8N769 122 aaPredicted RBP8.55□□□□□ -1.04
NUP188-205ENST00000477069 WFDC12Q8WWY7 111 aa8.55□□□□□ -1.04
NUP188-205ENST00000477069 TMEM158Q8WZ71 300 aa8.55□□□□□ -1.04
NUP188-205ENST00000477069 ITPR3Q14573 2671 aa8.55□□□□□ -1.04
NUP188-205ENST00000477069 TRAV12-3A0A0B4J271 114 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 LINC00315P59091 139 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 BATFQ16520 125 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 AMTNQ6UX39 209 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 ZMAT4Q9H898 229 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 LINC01619G3V211 115 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 LAGE3Q14657 143 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 COL5A1-AS1Q5SY13 56 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 SLC25A34Q6PIV7 304 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 FAM159AQ6UWV7 190 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 TEX29Q8N6K0 151 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 AP1S3Q96PC3 154 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 SMIM2Q9BVW6 85 aa8.54□□□□□ -1.04
NUP188-205ENST00000477069 COX8AP10176 69 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 FOXI2Q6ZQN5 318 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 Q6ZSV7 163 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 C9orf85Q96MD7 179 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 C18orf15Q96N68 181 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 DNAJC9-AS1A6NH13 148 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 A8MTW9 85 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 FGF6P10767 208 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 C20orf78Q9BR46 151 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 IGHV3-16A0A0C4DH30 117 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 CDKN1BP46527 198 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 ODF1Q14990 250 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 OR11H1Q8NG94 326 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 OR1N2Q8NGR9 330 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 DKK2Q9UBU2 259 aa8.53□□□□□ -1.04
NUP188-205ENST00000477069 CHTOPQ9Y3Y2 248 aaKnown RBP8.53□□□□□ -1.04
NUP188-205ENST00000477069 TRAV12-2A0A075B6T6 113 aa8.52□□□□□ -1.05
NUP188-205ENST00000477069 DUSP14O95147 198 aaKnown RBP8.52□□□□□ -1.05
NUP188-205ENST00000477069 SUMO2P61956 95 aaKnown RBP8.52□□□□□ -1.05
NUP188-205ENST00000477069 RPL39LQ96EH5 51 aaKnown RBP8.52□□□□□ -1.05
NUP188-205ENST00000477069 TRAV2A0A0B4J234 112 aa8.52□□□□□ -1.05
NUP188-205ENST00000477069 J3QKU1 62 aa8.52□□□□□ -1.05
NUP188-205ENST00000477069 SMIM17P0DL12 118 aa8.52□□□□□ -1.05
NUP188-205ENST00000477069 HINT1P49773 126 aaPredicted RBP8.52□□□□□ -1.05
NUP188-205ENST00000477069 OR9G4Q8NGQ1 327 aa8.52□□□□□ -1.05
NUP188-205ENST00000477069 ESM1Q9NQ30 184 aa8.52□□□□□ -1.05
NUP188-205ENST00000477069 CD7P09564 240 aa8.51□□□□□ -1.05
NUP188-205ENST00000477069 C2orf91Q6ZV80 131 aa8.51□□□□□ -1.05
NUP188-205ENST00000477069 IGKV3-20P01619 116 aa8.51□□□□□ -1.05
NUP188-205ENST00000477069 SPINK13Q1W4C9 94 aa8.51□□□□□ -1.05
NUP188-205ENST00000477069 K7EMI3 77 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 DLX4Q92988 240 aaPredicted RBP8.5□□□□□ -1.05
NUP188-205ENST00000477069 DUX3Q96PT4 197 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 PEMTQ9UBM1 199 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 CREBBPQ92793 2442 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 ATP5LO75964 103 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 MGPP08493 103 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 RBX1P62877 108 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 GAGE1Q13065 139 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 Q8N1Y9 231 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 MDFICQ9P1T7 246 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 HHLA3Q9XRX5 114 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 AGRNO00468 2067 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 RBMY1A1P0DJD3 496 aaKnown RBP8.5□□□□□ -1.05
NUP188-205ENST00000477069 RBMY1CP0DJD4 496 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 RBMY1FQ15415 496 aaKnown RBP8.5□□□□□ -1.05
NUP188-205ENST00000477069 JPT2Q9H910 190 aa8.5□□□□□ -1.05
NUP188-205ENST00000477069 DOPEY2Q9Y3R5 2298 aa8.49□□□□□ -1.05
NUP188-205ENST00000477069 IGHV1OR15-1A0A075B7D0 117 aa8.49□□□□□ -1.05
NUP188-205ENST00000477069 RPL32P62910 135 aaKnown RBP8.49□□□□□ -1.05
NUP188-205ENST00000477069 TMEM61Q8N0U2 210 aa8.49□□□□□ -1.05
NUP188-205ENST00000477069 KLHL30-AS1Q8NEE0 82 aa8.49□□□□□ -1.05
NUP188-205ENST00000477069 CIDEAO60543 219 aa8.49□□□□□ -1.05
NUP188-205ENST00000477069 PPP1R17O96001 155 aa8.49□□□□□ -1.05
NUP188-205ENST00000477069 HLA-DRB4P13762 266 aa8.49□□□□□ -1.05
NUP188-205ENST00000477069 ORMDL2Q53FV1 153 aa8.49□□□□□ -1.05
NUP188-205ENST00000477069 MPV17L2Q567V2 206 aa8.49□□□□□ -1.05
NUP188-205ENST00000477069 HIST2H2BDQ6DRA6 164 aa8.49□□□□□ -1.05
NUP188-205ENST00000477069 BOD1L2Q8IYS8 172 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms