RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 J3KRW8 73 aa12.39□□□□□ -0.43
TMEM53-208ENST00000476724 SMIM17P0DL12 118 aa12.39□□□□□ -0.43
TMEM53-208ENST00000476724 RNASE4P34096 147 aaKnown RBP12.39□□□□□ -0.43
TMEM53-208ENST00000476724 ODF1Q14990 250 aa12.39□□□□□ -0.43
TMEM53-208ENST00000476724 ANXA2RQ3ZCQ2 193 aa12.39□□□□□ -0.43
TMEM53-208ENST00000476724 MYOZ3Q8TDC0 251 aa12.39□□□□□ -0.43
TMEM53-208ENST00000476724 FOXC2Q99958 501 aa12.39□□□□□ -0.43
TMEM53-208ENST00000476724 PHLDA3Q9Y5J5 127 aa12.39□□□□□ -0.43
TMEM53-208ENST00000476724 K7EMI3 77 aa12.39□□□□□ -0.43
TMEM53-208ENST00000476724 HOXA3O43365 443 aaPredicted RBP12.39□□□□□ -0.43
TMEM53-208ENST00000476724 SEC11AP67812 179 aa12.39□□□□□ -0.43
TMEM53-208ENST00000476724 WFDC3Q8IUB2 231 aa12.39□□□□□ -0.43
TMEM53-208ENST00000476724 HECTD1Q9ULT8 2610 aa12.39□□□□□ -0.43
TMEM53-208ENST00000476724 TRAV26-2A0A0B4J265 109 aa12.38□□□□□ -0.43
TMEM53-208ENST00000476724 TAX1BP3O14907 124 aa12.38□□□□□ -0.43
TMEM53-208ENST00000476724 TMEM97Q5BJF2 176 aa12.38□□□□□ -0.43
TMEM53-208ENST00000476724 C20orf78Q9BR46 151 aa12.38□□□□□ -0.43
TMEM53-208ENST00000476724 FASNP49327 2511 aaKnown RBP12.38□□□□□ -0.43
TMEM53-208ENST00000476724 KRTAP1-1Q07627 177 aa12.38□□□□□ -0.43
TMEM53-208ENST00000476724 KIR3DS1Q14943 382 aa12.38□□□□□ -0.43
TMEM53-208ENST00000476724 Q6ZVH6 145 aa12.38□□□□□ -0.43
TMEM53-208ENST00000476724 VPREB3Q9UKI3 123 aa12.38□□□□□ -0.43
TMEM53-208ENST00000476724 IGKV3-7A0A075B6H7 116 aa12.37□□□□□ -0.43
TMEM53-208ENST00000476724 KLLNB2CW77 178 aa12.37□□□□□ -0.43
TMEM53-208ENST00000476724 F6UB75 175 aa12.37□□□□□ -0.43
TMEM53-208ENST00000476724 M0R381 172 aa12.37□□□□□ -0.43
TMEM53-208ENST00000476724 PPP1R17O96001 155 aa12.37□□□□□ -0.43
TMEM53-208ENST00000476724 SMIM2Q9BVW6 85 aa12.37□□□□□ -0.43
TMEM53-208ENST00000476724 IGKCP01834 107 aa12.36□□□□□ -0.43
TMEM53-208ENST00000476724 FOSL1P15407 271 aa12.36□□□□□ -0.43
TMEM53-208ENST00000476724 DEFB1P60022 68 aa12.36□□□□□ -0.43
TMEM53-208ENST00000476724 DCANP1Q8TF63 244 aa12.36□□□□□ -0.43
TMEM53-208ENST00000476724 DUX5Q96PT3 197 aa12.36□□□□□ -0.43
TMEM53-208ENST00000476724 CCL25O15444 150 aa12.36□□□□□ -0.43
TMEM53-208ENST00000476724 ORMDL2Q53FV1 153 aa12.36□□□□□ -0.43
TMEM53-208ENST00000476724 HHLA3Q9XRX5 114 aa12.36□□□□□ -0.43
TMEM53-208ENST00000476724 CUBNO60494 3623 aa12.35□□□□□ -0.43
TMEM53-208ENST00000476724 SONP18583 2426 aaKnown RBP12.35□□□□□ -0.43
TMEM53-208ENST00000476724 DPM2O94777 84 aa12.35□□□□□ -0.43
TMEM53-208ENST00000476724 ANK3Q12955 4377 aaKnown RBP12.35□□□□□ -0.43
TMEM53-208ENST00000476724 RNASE3P12724 160 aaKnown RBP12.34□□□□□ -0.43
TMEM53-208ENST00000476724 NMUP48645 174 aa12.34□□□□□ -0.43
TMEM53-208ENST00000476724 SUMO2P61956 95 aaKnown RBP12.34□□□□□ -0.43
TMEM53-208ENST00000476724 HSD52Q0P140 79 aa12.34□□□□□ -0.43
TMEM53-208ENST00000476724 VAMP3Q15836 100 aa12.34□□□□□ -0.43
TMEM53-208ENST00000476724 C10orf99Q6UWK7 81 aa12.34□□□□□ -0.43
TMEM53-208ENST00000476724 AP1S3Q96PC3 154 aa12.34□□□□□ -0.43
TMEM53-208ENST00000476724 ODF3Q96PU9 254 aa12.34□□□□□ -0.43
TMEM53-208ENST00000476724 ACANP16112 2415 aa12.34□□□□□ -0.43
TMEM53-208ENST00000476724 GNRH2O43555 120 aa12.34□□□□□ -0.43
TMEM53-208ENST00000476724 NXPH4O95158 308 aa12.34□□□□□ -0.43
TMEM53-208ENST00000476724 FAM159AQ6UWV7 190 aa12.33□□□□□ -0.44
TMEM53-208ENST00000476724 C14orf178Q8N769 122 aaPredicted RBP12.33□□□□□ -0.44
TMEM53-208ENST00000476724 POM121L12Q8N7R1 296 aa12.33□□□□□ -0.44
TMEM53-208ENST00000476724 RASL10AQ92737 203 aa12.33□□□□□ -0.44
TMEM53-208ENST00000476724 A6NDN8 102 aa12.33□□□□□ -0.44
TMEM53-208ENST00000476724 ELANEP08246 267 aa12.33□□□□□ -0.44
TMEM53-208ENST00000476724 SRD5A1P18405 259 aa12.33□□□□□ -0.44
TMEM53-208ENST00000476724 A0A087WX48 190 aa12.32□□□□□ -0.44
TMEM53-208ENST00000476724 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.32□□□□□ -0.44
TMEM53-208ENST00000476724 HLA-DRB4P13762 266 aa12.32□□□□□ -0.44
TMEM53-208ENST00000476724 ADAMTSL5Q6ZMM2 481 aa12.32□□□□□ -0.44
TMEM53-208ENST00000476724 HLA-DRB4X5D2U9 266 aa12.32□□□□□ -0.44
TMEM53-208ENST00000476724 TRAV12-1A0A0B4J245 112 aa12.31□□□□□ -0.44
TMEM53-208ENST00000476724 LGALS9O00182 355 aa12.31□□□□□ -0.44
TMEM53-208ENST00000476724 SNRPD3P62318 126 aaKnown RBP12.31□□□□□ -0.44
TMEM53-208ENST00000476724 PCP2Q8IVA1 136 aa12.31□□□□□ -0.44
TMEM53-208ENST00000476724 ZNF702PQ9H963 129 aa12.31□□□□□ -0.44
TMEM53-208ENST00000476724 HIGD1BQ9P298 99 aa12.31□□□□□ -0.44
TMEM53-208ENST00000476724 C7orf71A4D174 169 aa12.31□□□□□ -0.44
TMEM53-208ENST00000476724 MGPP08493 103 aa12.3□□□□□ -0.44
TMEM53-208ENST00000476724 LGALS1P09382 135 aaKnown RBP12.3□□□□□ -0.44
TMEM53-208ENST00000476724 EDN2P20800 178 aa12.3□□□□□ -0.44
TMEM53-208ENST00000476724 PLNP26678 52 aa12.3□□□□□ -0.44
TMEM53-208ENST00000476724 TOMM6Q96B49 74 aa12.3□□□□□ -0.44
TMEM53-208ENST00000476724 YAE1D1Q9NRH1 226 aa12.3□□□□□ -0.44
TMEM53-208ENST00000476724 CBY3A6NI87 242 aa12.3□□□□□ -0.44
TMEM53-208ENST00000476724 ZC2HC1BQ5TFG8 222 aa12.3□□□□□ -0.44
TMEM53-208ENST00000476724 H3BRM9 83 aa12.29□□□□□ -0.44
TMEM53-208ENST00000476724 TCTAP57738 103 aa12.29□□□□□ -0.44
TMEM53-208ENST00000476724 RPL32P62910 135 aaKnown RBP12.29□□□□□ -0.44
TMEM53-208ENST00000476724 OR4C5Q8NGB2 326 aa12.29□□□□□ -0.44
TMEM53-208ENST00000476724 UBE2E2Q96LR5 201 aa12.29□□□□□ -0.44
TMEM53-208ENST00000476724 TMEM160Q9NX00 188 aa12.29□□□□□ -0.44
TMEM53-208ENST00000476724 MRPL35Q9NZE8 188 aaKnown RBP12.29□□□□□ -0.44
TMEM53-208ENST00000476724 MYO9AB2RTY4 2548 aa12.28□□□□□ -0.44
TMEM53-208ENST00000476724 IGHV4OR15-8A0A075B7B6 117 aa12.28□□□□□ -0.44
TMEM53-208ENST00000476724 A0A087WW49 117 aa12.28□□□□□ -0.44
TMEM53-208ENST00000476724 LINC01549A6NIU2 74 aa12.28□□□□□ -0.44
TMEM53-208ENST00000476724 K7EQG2 157 aa12.28□□□□□ -0.44
TMEM53-208ENST00000476724 KIF25-AS1Q9Y6Z4 181 aa12.28□□□□□ -0.44
TMEM53-208ENST00000476724 A0A0J9YX75 114 aa12.28□□□□□ -0.44
TMEM53-208ENST00000476724 H7C1H1 209 aa12.28□□□□□ -0.44
TMEM53-208ENST00000476724 SPRY2O43597 315 aa12.28□□□□□ -0.44
TMEM53-208ENST00000476724 RPL39LQ96EH5 51 aaKnown RBP12.28□□□□□ -0.44
TMEM53-208ENST00000476724 SCGB3A1Q96QR1 104 aa12.28□□□□□ -0.44
TMEM53-208ENST00000476724 SELENOKQ9Y6D0 94 aa12.28□□□□□ -0.44
TMEM53-208ENST00000476724 IGKV2D-26A0A0A0MRZ7 120 aa12.27□□□□□ -0.45
TMEM53-208ENST00000476724 RNF152Q8N8N0 203 aa12.27□□□□□ -0.45
TMEM53-208ENST00000476724 SMR3AQ99954 134 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms