RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 DYNAPQ8N1N2 210 aa6.46□□□□□ -1.38
VAPB-205ENST00000476395 LY6G5BQ8NDX9 201 aa6.46□□□□□ -1.38
VAPB-205ENST00000476395 IGHV3OR16-8A0A075B7F1 116 aa6.45□□□□□ -1.38
VAPB-205ENST00000476395 TRAV4A0A0B4J268 109 aa6.45□□□□□ -1.38
VAPB-205ENST00000476395 HLA-DMBP28068 263 aa6.45□□□□□ -1.38
VAPB-205ENST00000476395 GRNP28799 593 aaKnown RBP6.45□□□□□ -1.38
VAPB-205ENST00000476395 PLEKHB2Q96CS7 222 aa6.45□□□□□ -1.38
VAPB-205ENST00000476395 CRIP2P52943 208 aaPredicted RBP6.45□□□□□ -1.38
VAPB-205ENST00000476395 LINC00477Q96M19 166 aa6.45□□□□□ -1.38
VAPB-205ENST00000476395 RAXQ9Y2V3 346 aa6.45□□□□□ -1.38
VAPB-205ENST00000476395 MAP1AP78559 2803 aaPredicted RBP6.45□□□□□ -1.38
VAPB-205ENST00000476395 SPTBN1Q01082 2364 aaKnown RBP6.45□□□□□ -1.38
VAPB-205ENST00000476395 LOC107984640A0A0U1RRK4 108 aa6.44□□□□□ -1.38
VAPB-205ENST00000476395 C9JAW5 83 aa6.44□□□□□ -1.38
VAPB-205ENST00000476395 KHDC1LQ5JSQ8 128 aa6.44□□□□□ -1.38
VAPB-205ENST00000476395 CRYBG3Q68DQ2 2970 aa6.44□□□□□ -1.38
VAPB-205ENST00000476395 CELSR2Q9HCU4 2923 aa6.44□□□□□ -1.38
VAPB-205ENST00000476395 A8MZ25 164 aa6.44□□□□□ -1.38
VAPB-205ENST00000476395 TCL1BO95988 128 aa6.44□□□□□ -1.38
VAPB-205ENST00000476395 TRGV3P03979 118 aa6.44□□□□□ -1.38
VAPB-205ENST00000476395 TIMD4Q96H15 378 aa6.44□□□□□ -1.38
VAPB-205ENST00000476395 TIMM23O14925 209 aa6.44□□□□□ -1.38
VAPB-205ENST00000476395 ANKRD29Q8N6D5 301 aa6.44□□□□□ -1.38
VAPB-205ENST00000476395 KLHL30-AS1Q8NEE0 82 aa6.44□□□□□ -1.38
VAPB-205ENST00000476395 IGLV11-55A0A075B6I3 123 aa6.43□□□□□ -1.38
VAPB-205ENST00000476395 HOXA3O43365 443 aaPredicted RBP6.43□□□□□ -1.38
VAPB-205ENST00000476395 LY6HO94772 140 aa6.43□□□□□ -1.38
VAPB-205ENST00000476395 GFRALQ6UXV0 394 aa6.43□□□□□ -1.38
VAPB-205ENST00000476395 NPBQ8NG41 125 aa6.43□□□□□ -1.38
VAPB-205ENST00000476395 LINC01546A6NGU7 62 aa6.43□□□□□ -1.38
VAPB-205ENST00000476395 ODF3BA8MYP8 253 aa6.43□□□□□ -1.38
VAPB-205ENST00000476395 DLX4Q92988 240 aaPredicted RBP6.43□□□□□ -1.38
VAPB-205ENST00000476395 IL4P05112 153 aa6.43□□□□□ -1.38
VAPB-205ENST00000476395 IGSF10Q6WRI0 2623 aa6.43□□□□□ -1.38
VAPB-205ENST00000476395 STHQ8IWL8 128 aa6.43□□□□□ -1.38
VAPB-205ENST00000476395 RPEQ96AT9 228 aa6.43□□□□□ -1.38
VAPB-205ENST00000476395 EDA2RQ9HAV5 297 aa6.43□□□□□ -1.38
VAPB-205ENST00000476395 BEX4Q9NWD9 120 aaPredicted RBP6.43□□□□□ -1.38
VAPB-205ENST00000476395 LGALS1P09382 135 aaKnown RBP6.42□□□□□ -1.38
VAPB-205ENST00000476395 COX7A1P24310 79 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 RASL11BQ9BPW5 248 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 USP24Q9UPU5 2620 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 ATP5LO75964 103 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 LINC00694P0DN24 101 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 FAM159AQ6UWV7 190 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 Q8N6K4 173 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.42□□□□□ -1.38
VAPB-205ENST00000476395 IGLC6P0CF74 106 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 C4orf26Q17RF5 130 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 LYPD1Q8N2G4 141 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 OR11H6Q8NGC7 330 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 PIFOQ8TCI5 191 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 PRO0628Q9UI54 55 aa6.42□□□□□ -1.38
VAPB-205ENST00000476395 FLNCQ14315 2725 aa6.41□□□□□ -1.38
VAPB-205ENST00000476395 TRPT1Q86TN4 253 aaKnown RBP6.41□□□□□ -1.38
VAPB-205ENST00000476395 TEN1Q86WV5 123 aa6.41□□□□□ -1.38
VAPB-205ENST00000476395 VKORC1Q9BQB6 163 aa6.41□□□□□ -1.38
VAPB-205ENST00000476395 UTP20O75691 2785 aaKnown RBP6.41□□□□□ -1.38
VAPB-205ENST00000476395 IGHV3-35A0A0C4DH35 117 aa6.41□□□□□ -1.38
VAPB-205ENST00000476395 NDUFV3P56181 108 aaKnown RBP6.41□□□□□ -1.38
VAPB-205ENST00000476395 PPDPFLQ8WWR9 84 aa6.41□□□□□ -1.38
VAPB-205ENST00000476395 AKAP9Q99996 3911 aa6.41□□□□□ -1.38
VAPB-205ENST00000476395 CENPEQ02224 2701 aa6.41□□□□□ -1.38
VAPB-205ENST00000476395 DTX2Q86UW9 622 aa6.41□□□□□ -1.38
VAPB-205ENST00000476395 RNF5Q99942 180 aa6.41□□□□□ -1.38
VAPB-205ENST00000476395 MYMXA0A1B0GTQ4 84 aa6.4□□□□□ -1.38
VAPB-205ENST00000476395 NCBP2LA6PVI3 153 aaKnown RBP6.4□□□□□ -1.38
VAPB-205ENST00000476395 H7C2G1 150 aa6.4□□□□□ -1.38
VAPB-205ENST00000476395 ZNF688P0C7X2 276 aa6.4□□□□□ -1.38
VAPB-205ENST00000476395 ERCC8Q13216 396 aa6.4□□□□□ -1.38
VAPB-205ENST00000476395 Q6ZS46 218 aa6.4□□□□□ -1.38
VAPB-205ENST00000476395 TMEM101Q96IK0 257 aa6.4□□□□□ -1.38
VAPB-205ENST00000476395 PEMTQ9UBM1 199 aa6.4□□□□□ -1.38
VAPB-205ENST00000476395 AKAP6Q13023 2319 aa6.4□□□□□ -1.38
VAPB-205ENST00000476395 MYO18BQ8IUG5 2567 aa6.4□□□□□ -1.38
VAPB-205ENST00000476395 IGLV2-18A0A075B6J9 118 aa6.4□□□□□ -1.39
VAPB-205ENST00000476395 IGHV3-23P01764 117 aa6.4□□□□□ -1.39
VAPB-205ENST00000476395 ELANEP08246 267 aa6.4□□□□□ -1.39
VAPB-205ENST00000476395 CTSGP08311 255 aa6.4□□□□□ -1.39
VAPB-205ENST00000476395 SRSF9Q13242 221 aaKnown RBP eCLIP6.4□□□□□ -1.39
VAPB-205ENST00000476395 ZNF672Q499Z4 452 aaPredicted RBP6.4□□□□□ -1.39
VAPB-205ENST00000476395 C1orf195Q5TG92 126 aa6.4□□□□□ -1.39
VAPB-205ENST00000476395 HRCT1Q6UXD1 115 aa6.4□□□□□ -1.39
VAPB-205ENST00000476395 CNFNQ9BYD5 112 aa6.4□□□□□ -1.39
VAPB-205ENST00000476395 MED13LQ71F56 2210 aa6.4□□□□□ -1.39
VAPB-205ENST00000476395 TRAV8-2A0A0B4J237 113 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 PRAC2D3DTV9 90 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 CD3EP07766 207 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 TAL2Q16559 108 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 LINC01560Q8TB33 94 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 PRR25Q96S07 402 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 C11orf21Q9P2W6 132 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 SLC25A16P16260 332 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 SCGB1D4Q6XE38 83 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 ATP6V0E2Q8NHE4 81 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 IL17DQ8TAD2 202 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 CLPSL1A2RUU4 121 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 ZNF815PA8K554 130 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 PDE6HQ13956 83 aa6.39□□□□□ -1.39
VAPB-205ENST00000476395 PRADC1Q9BSG0 188 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms