RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	CNN1	P51911	297 aa	Known RBP	4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	RAB2A	P61019	212 aa		4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	TDRG1	Q3Y452	100 aa		4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	PQLC2	Q6ZP29	291 aa		4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	TMUB2	Q71RG4	321 aa		4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	OR11H4	Q8NGC9	324 aa		4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	BLNK	Q8WV28	456 aa		4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	MRPL53	Q96EL3	112 aa	Known RBP	4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	SH3BGRL3	Q9H299	93 aa		4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	OR51M1	Q9H341	326 aa		4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	AAMDC	Q9H7C9	122 aa		4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	PRELID1	Q9Y255	219 aa		4.71	□□□□□ -1.66
HDAC9-223	ENST00000476135	MUC2	Q02817	5179 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	TRAV12-2	A0A075B6T6	113 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	TRAV8-2	A0A0B4J237	113 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	UMAD1	C9J7I0	102 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135		H3BQ15	152 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135		H3BTX0	84 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	SLC17A3	O00476	420 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	HIST1H1A	Q02539	215 aa	Predicted RBP	4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	PSG3	Q16557	428 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	FAM74A1	Q5RGS3	127 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	EIF5AL1	Q6IS14	154 aa	Known RBP	4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	WFDC10B	Q8IUB3	73 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	RNF182	Q8N6D2	247 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	STOML3	Q8TAV4	291 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	RPUSD4	Q96CM3	377 aa	Known RBP	4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	FAM167A-AS1	Q96KT0	104 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	TPPP3	Q9BW30	176 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	CYTL1	Q9NRR1	136 aa		4.7	□□□□□ -1.66
HDAC9-223	ENST00000476135	TRGV11	A0A075B6L2	103 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	CTXND1	A0A1B0GTU2	59 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135		A0A1B0GVG6	124 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	XKRY2	A2RUG3	117 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	SNURFL	B1AK76	121 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	ZNF324	O75467	553 aa	Predicted RBP	4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	CXorf1	O96002	111 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	SNRPC	P09234	159 aa	Known RBP	4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	OR10J4	P0C629	311 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	NBEAP1	P0C6P0	100 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	SEC11B	P0C7V7	166 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	STAG3L2	P0CL84	134 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	STAG3L3	P0CL85	134 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	CSN1S1	P47710	185 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	MRPL23	Q16540	153 aa	Known RBP	4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	IQCF2	Q8IXL9	164 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	OR8A1	Q8NGG7	326 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	FXYD5	Q96DB9	178 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	PHYHIPL	Q96FC7	376 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	TMEM167B	Q9NRX6	74 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135	COX11	Q9Y6N1	276 aa		4.69	□□□□□ -1.66
HDAC9-223	ENST00000476135		A0A0A0MQY5	61 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	MAP1LC3B2	A6NCE7	125 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	IBA57-AS1	B1ANH7	110 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135		H7BYZ3	331 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	ARL14EPL	P0DKL9	152 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	FOXI1	Q12951	378 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	DAZ2	Q13117	558 aa	Known RBP	4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	WFDC2	Q14508	124 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	LINC01620	Q4KN68	170 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	DPPA3	Q6W0C5	159 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	NEGR1	Q7Z3B1	354 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	SLC51B	Q86UW2	128 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	CMTM2	Q8TAZ6	248 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	C20orf144	Q9BQM9	153 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	MAP1LC3B	Q9GZQ8	125 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	OTOR	Q9NRC9	128 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	CRCT1	Q9UGL9	99 aa		4.68	□□□□□ -1.66
HDAC9-223	ENST00000476135	LPA	P08519	4548 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	TEX46	H3BTG2	121 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	HMGB3	O15347	200 aa	Known RBP	4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	NDUFB4	O95168	129 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	GCHFR	P30047	84 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	LEP	P41159	167 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	RAB5C	P51148	216 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	RAN	P62826	216 aa	Known RBP	4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	ZNF415	Q09FC8	603 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	SLA	Q13239	276 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	TMEM78	Q5T7P6	136 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135		Q6ZTI0	123 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	EXOC3-AS1	Q8N2X6	119 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	C9orf62	Q8N4C0	152 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	FAM213B	Q8TBF2	198 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	TMED6	Q8WW62	240 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	ODF3	Q96PU9	254 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	TM2D2	Q9BX73	214 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	PRO0255	Q9UI72	69 aa		4.67	□□□□□ -1.66
HDAC9-223	ENST00000476135	TRGV2	A0A075B6R0	118 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	SERTM2	A0A1B0GWG4	89 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135		K7EQM0	130 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135		M0R3E3	92 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	EIF3G	O75821	320 aa	Known RBP eCLIP	4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	SLC25A5	P05141	298 aa	Known RBP	4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	PPT1	P50897	306 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	CD300C	Q08708	224 aa		4.66	□□□□□ -1.66
HDAC9-223	ENST00000476135	ZNF726P1	Q15940	193 aa		4.66	□□□□□ -1.66

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