RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 PEMTQ9UBM1 199 aa3.04□□□□□ -1.92
USP16-205ENST00000474835 MAP1BP46821 2468 aaKnown RBP3.03□□□□□ -1.92
USP16-205ENST00000474835 MBD3L4A6NDZ8 208 aaPredicted RBP3.03□□□□□ -1.92
USP16-205ENST00000474835 MBD3L3A6NE82 208 aaPredicted RBP3.03□□□□□ -1.92
USP16-205ENST00000474835 MBD3L5A6NJ08 208 aaPredicted RBP3.03□□□□□ -1.92
USP16-205ENST00000474835 DEFB108AA8MXU0 73 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 CHEK1O14757 476 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 TRIAP1O43715 76 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 SLC25A20O43772 301 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 IGHG2P01859 326 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 LINC00694P0DN24 101 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 MRPS36P82909 103 aaKnown RBP3.03□□□□□ -1.92
USP16-205ENST00000474835 LINC01620Q4KN68 170 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 ZFAND2AQ8N6M9 145 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 DAND5Q8N907 189 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 Q8NA96 180 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 MBD3L2Q8NHZ7 208 aaPredicted RBP3.03□□□□□ -1.92
USP16-205ENST00000474835 FAM57AQ8TBR7 257 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 ASCL2Q99929 193 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 PRADC1Q9BSG0 188 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 PYGO1Q9Y3Y4 419 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 TRBV7-1A0A0A6YYK4 115 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 UQCRQO14949 82 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 BCE1O60756 84 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 RNASE3P12724 160 aaKnown RBP3.03□□□□□ -1.92
USP16-205ENST00000474835 LMO4P61968 165 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 METTL26Q96S19 204 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 HIGD1AQ9Y241 93 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 DYNC2H1Q8NCM8 4307 aaKnown RBP3.03□□□□□ -1.92
USP16-205ENST00000474835 TRAV17A0A0B4J275 112 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 LEPROTO15243 131 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 ACYP1P07311 99 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 ATP5J2P56134 94 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 C10orf55Q5SWW7 151 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 GOLT1AQ6ZVE7 132 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 PRO1854Q9UHT4 67 aa3.03□□□□□ -1.92
USP16-205ENST00000474835 NDUFC2-KCTD14E9PQ53 114 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 F8WDY8 70 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 IGHV1-46P01743 117 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 IGFL4Q6B9Z1 124 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 FAM19A5Q7Z5A7 132 aaPredicted RBP3.02□□□□□ -1.93
USP16-205ENST00000474835 SMIM20Q8N5G0 67 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 TEX29Q8N6K0 151 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 RBMXL3Q8N7X1 1067 aaKnown RBP3.02□□□□□ -1.93
USP16-205ENST00000474835 ZNRF1Q8ND25 227 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 PRSS3P2Q8NHM4 247 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 DNAH6Q9C0G6 4158 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 IGLV5-39A0A0G2JS06 123 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 COX7CP15954 63 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 SRSF9Q13242 221 aaKnown RBP eCLIP3.02□□□□□ -1.93
USP16-205ENST00000474835 C22orf34Q6ZV56 151 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 DYNAPQ8N1N2 210 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 ZNF784Q8NCA9 323 aaPredicted RBP3.02□□□□□ -1.93
USP16-205ENST00000474835 TMEM141Q96I45 108 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 C9orf85Q96MD7 179 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 PLCE1Q9P212 2302 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 INTS1Q8N201 2190 aaKnown RBP3.02□□□□□ -1.93
USP16-205ENST00000474835 AHCTF1Q8WYP5 2266 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 TEX49A0A1B0GTD5 131 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 A8MWV9 139 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 KLLNB2CW77 178 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 CTSGP08311 255 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 FXYD7P58549 80 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 Q8N2B8 174 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 TIMD4Q96H15 378 aa3.02□□□□□ -1.93
USP16-205ENST00000474835 PRAC2D3DTV9 90 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 RPL7P18124 248 aaKnown RBP3.01□□□□□ -1.93
USP16-205ENST00000474835 MAGEA5P43359 124 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 SUB1P53999 127 aaKnown RBP eCLIP3.01□□□□□ -1.931e-7■■■■■ 35.4
USP16-205ENST00000474835 HES1Q14469 280 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 C1orf158Q8N1D5 194 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 FOXC2Q99958 501 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 MED13Q9UHV7 2174 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 LCE6AA0A183 80 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 GLRXP35754 106 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 ORMDL2Q53FV1 153 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 PRNTQ86SH4 94 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 TRPT1Q86TN4 253 aaKnown RBP3.01□□□□□ -1.93
USP16-205ENST00000474835 LEAP2Q969E1 77 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 SCNM1Q9BWG6 230 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 HES7Q9BYE0 225 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 RALYQ9UKM9 306 aaKnown RBP3.01□□□□□ -1.93
USP16-205ENST00000474835 NIPBLQ6KC79 2804 aaeCLIP3.01□□□□□ -1.93
USP16-205ENST00000474835 IGHV3-64DA0A0J9YX35 117 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 ORM2P19652 201 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 CNTFRP26992 372 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 MZT1Q08AG7 82 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 ADAMTSL4-AS1Q5T5F5 129 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 TMEM61Q8N0U2 210 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 LINC01561Q8N1V8 128 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 ZNF580Q9UK33 172 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 CUL9Q8IWT3 2517 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 ICE1Q9Y2F5 2266 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 TECTAO75443 2155 aa3.01□□□□□ -1.93
USP16-205ENST00000474835 LY6G6DO95868 133 aa3□□□□□ -1.93
USP16-205ENST00000474835 ERHP84090 104 aaKnown RBP3□□□□□ -1.93
USP16-205ENST00000474835 IL17DQ8TAD2 202 aa3□□□□□ -1.93
USP16-205ENST00000474835 RNF125Q96EQ8 232 aa3□□□□□ -1.93
USP16-205ENST00000474835 PRO3102Q9H379 93 aa3□□□□□ -1.93
USP16-205ENST00000474835 APOA2P02652 100 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms