RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 GATA1P15976 413 aaPredicted RBP14.07□□□□□ -0.16
SNX13-206ENST00000474067 EVI2AP22794 236 aa14.07□□□□□ -0.16
SNX13-206ENST00000474067 TIRAPP58753 221 aa14.07□□□□□ -0.16
SNX13-206ENST00000474067 TNP2Q05952 138 aa14.07□□□□□ -0.16
SNX13-206ENST00000474067 FAM162BQ5T6X4 162 aa14.07□□□□□ -0.16
SNX13-206ENST00000474067 COX8CQ7Z4L0 72 aa14.07□□□□□ -0.16
SNX13-206ENST00000474067 C10orf126Q8N4M7 172 aa14.07□□□□□ -0.16
SNX13-206ENST00000474067 MBD3L1Q8WWY6 194 aa14.07□□□□□ -0.16
SNX13-206ENST00000474067 B4DEV8 164 aa14.06□□□□□ -0.16
SNX13-206ENST00000474067 EREGO14944 169 aa14.06□□□□□ -0.16
SNX13-206ENST00000474067 H2AFB1P0C5Y9 115 aa14.06□□□□□ -0.16
SNX13-206ENST00000474067 RAB5CP51148 216 aa14.06□□□□□ -0.16
SNX13-206ENST00000474067 LINC00479Q96M42 142 aa14.06□□□□□ -0.16
SNX13-206ENST00000474067 IL36BQ9NZH7 164 aa14.06□□□□□ -0.16
SNX13-206ENST00000474067 CFAP126Q5VTH2 177 aa14.05□□□□□ -0.16
SNX13-206ENST00000474067 ZFP2Q6ZN57 461 aa14.05□□□□□ -0.16
SNX13-206ENST00000474067 C11orf21Q9P2W6 132 aa14.05□□□□□ -0.16
SNX13-206ENST00000474067 ZNF506Q5JVG8 444 aa14.04□□□□□ -0.16
SNX13-206ENST00000474067 HECTD4Q9Y4D8 3996 aa14.03□□□□□ -0.16
SNX13-206ENST00000474067 TRAV8-6A0A0B4J262 113 aa14.03□□□□□ -0.16
SNX13-206ENST00000474067 IGKV3D-20A0A0C4DH25 116 aa14.03□□□□□ -0.16
SNX13-206ENST00000474067 RHODO00212 210 aa14.03□□□□□ -0.16
SNX13-206ENST00000474067 PAGE4O60829 102 aa14.03□□□□□ -0.16
SNX13-206ENST00000474067 RNASE3P12724 160 aaKnown RBP14.03□□□□□ -0.16
SNX13-206ENST00000474067 DNLZQ5SXM8 178 aa14.03□□□□□ -0.16
SNX13-206ENST00000474067 OR11H4Q8NGC9 324 aa14.03□□□□□ -0.16
SNX13-206ENST00000474067 PGPEP1LA6NFU8 196 aa14.02□□□□□ -0.17
SNX13-206ENST00000474067 C16orf90A8MZG2 172 aa14.02□□□□□ -0.17
SNX13-206ENST00000474067 LTAP01374 205 aa14.02□□□□□ -0.17
SNX13-206ENST00000474067 LINC00315P59091 139 aa14.02□□□□□ -0.17
SNX13-206ENST00000474067 TMUB2Q71RG4 321 aa14.02□□□□□ -0.17
SNX13-206ENST00000474067 SLC25A29Q8N8R3 303 aa14.02□□□□□ -0.17
SNX13-206ENST00000474067 KRTAP1-5Q9BYS1 174 aa14.02□□□□□ -0.17
SNX13-206ENST00000474067 MANBALQ9NQG1 85 aa14.02□□□□□ -0.17
SNX13-206ENST00000474067 ZC2HC1AQ96GY0 325 aa14.01□□□□□ -0.17
SNX13-206ENST00000474067 PHLDA3Q9Y5J5 127 aa14.01□□□□□ -0.17
SNX13-206ENST00000474067 SH2D1AO60880 128 aa14□□□□□ -0.17
SNX13-206ENST00000474067 DNAH10OSP0CZ25 163 aa14□□□□□ -0.17
SNX13-206ENST00000474067 ZNF674Q2M3X9 581 aa14□□□□□ -0.17
SNX13-206ENST00000474067 LINC01559Q495D7 138 aa14□□□□□ -0.17
SNX13-206ENST00000474067 KRBOX1C9JBD0 128 aa13.99□□□□□ -0.17
SNX13-206ENST00000474067 ERVFC1-1P60608 527 aa13.99□□□□□ -0.17
SNX13-206ENST00000474067 TCTE3Q8IZS6 198 aa13.99□□□□□ -0.17
SNX13-206ENST00000474067 PARLQ9H300 379 aa13.99□□□□□ -0.17
SNX13-206ENST00000474067 IGHV3-38A0A0C4DH36 116 aa13.98□□□□□ -0.17
SNX13-206ENST00000474067 ZFP82Q8N141 532 aa13.98□□□□□ -0.17
SNX13-206ENST00000474067 H3BVH4 76 aa13.97□□□□□ -0.17
SNX13-206ENST00000474067 M0R036 132 aa13.97□□□□□ -0.17
SNX13-206ENST00000474067 IFNA1P01562 189 aa13.97□□□□□ -0.17
SNX13-206ENST00000474067 ARMS2P0C7Q2 107 aa13.97□□□□□ -0.17
SNX13-206ENST00000474067 OR10J3Q5JRS4 329 aa13.97□□□□□ -0.17
SNX13-206ENST00000474067 ATP6V0E2Q8NHE4 81 aa13.97□□□□□ -0.17
SNX13-206ENST00000474067 MSRB1Q9NZV6 116 aa13.97□□□□□ -0.17
SNX13-206ENST00000474067 IGHV3-73A0A0B4J1V6 119 aa13.96□□□□□ -0.17
SNX13-206ENST00000474067 TRAV1-1A0A0B4J248 108 aa13.96□□□□□ -0.17
SNX13-206ENST00000474067 CXCL1P09341 107 aa13.96□□□□□ -0.17
SNX13-206ENST00000474067 LELP1Q5T871 98 aa13.96□□□□□ -0.17
SNX13-206ENST00000474067 SPATA12Q7Z6I5 190 aa13.96□□□□□ -0.17
SNX13-206ENST00000474067 BAGE2Q86Y30 109 aa13.96□□□□□ -0.17
SNX13-206ENST00000474067 WFDC10BQ8IUB3 73 aa13.96□□□□□ -0.17
SNX13-206ENST00000474067 GTSF1LQ9H1H1 148 aa13.96□□□□□ -0.17
SNX13-206ENST00000474067 A0A087WWC5 75 aa13.95□□□□□ -0.18
SNX13-206ENST00000474067 LOC100131303A0A0U1RQF7 123 aa13.95□□□□□ -0.18
SNX13-206ENST00000474067 A0A1B0GV50 99 aa13.95□□□□□ -0.18
SNX13-206ENST00000474067 CRYGDP07320 174 aa13.95□□□□□ -0.18
SNX13-206ENST00000474067 CRIP1P50238 77 aa13.95□□□□□ -0.18
SNX13-206ENST00000474067 ZNF575Q86XF7 245 aa13.95□□□□□ -0.18
SNX13-206ENST00000474067 TAGLN2P37802 199 aaKnown RBP13.94□□□□□ -0.18
SNX13-206ENST00000474067 LINC01556Q5JQF7 62 aa13.94□□□□□ -0.18
SNX13-206ENST00000474067 SLC51BQ86UW2 128 aa13.94□□□□□ -0.18
SNX13-206ENST00000474067 PGPEP1Q9NXJ5 209 aa13.94□□□□□ -0.18
SNX13-206ENST00000474067 SCO2A0A1W2PP80 73 aa13.93□□□□□ -0.18
SNX13-206ENST00000474067 C1QBP02746 253 aa13.93□□□□□ -0.18
SNX13-206ENST00000474067 CDPF1Q6NVV7 123 aa13.93□□□□□ -0.18
SNX13-206ENST00000474067 GNG13Q9P2W3 67 aa13.93□□□□□ -0.18
SNX13-206ENST00000474067 DNAH2Q9P225 4427 aa13.92□□□□□ -0.18
SNX13-206ENST00000474067 GRIFINA4D1Z8 144 aa13.92□□□□□ -0.18
SNX13-206ENST00000474067 CDK2AP2O75956 126 aa13.92□□□□□ -0.18
SNX13-206ENST00000474067 SULT1A2P50226 295 aa13.92□□□□□ -0.18
SNX13-206ENST00000474067 DMRTA1Q5VZB9 504 aa13.92□□□□□ -0.18
SNX13-206ENST00000474067 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.92□□□□□ -0.18
SNX13-206ENST00000474067 SMIM12Q96EX1 92 aa13.92□□□□□ -0.18
SNX13-206ENST00000474067 SFRP2Q96HF1 295 aa13.92□□□□□ -0.18
SNX13-206ENST00000474067 SCRT2Q9NQ03 307 aa13.92□□□□□ -0.18
SNX13-206ENST00000474067 BIN3Q9NQY0 253 aa13.92□□□□□ -0.18
SNX13-206ENST00000474067 FAT2Q9NYQ8 4349 aa13.91□□□□□ -0.18
SNX13-206ENST00000474067 M0R381 172 aa13.91□□□□□ -0.18
SNX13-206ENST00000474067 PDE6DO43924 150 aa13.91□□□□□ -0.18
SNX13-206ENST00000474067 FAM74A4Q5TZK3 123 aa13.91□□□□□ -0.18
SNX13-206ENST00000474067 Q6ZRN7 208 aaPredicted RBP13.91□□□□□ -0.18
SNX13-206ENST00000474067 DNAH17Q9UFH2 4485 aa13.91□□□□□ -0.18
SNX13-206ENST00000474067 TMSB15BA0A087X1C1 80 aa13.9□□□□□ -0.18
SNX13-206ENST00000474067 TRBV10-1A0A0K0K1A3 114 aa13.9□□□□□ -0.18
SNX13-206ENST00000474067 PSCAO43653 123 aa13.9□□□□□ -0.18
SNX13-206ENST00000474067 TOR2AQ5JU69 321 aa13.9□□□□□ -0.18
SNX13-206ENST00000474067 C11orf52Q96A22 123 aa13.9□□□□□ -0.18
SNX13-206ENST00000474067 DAZAP1Q96EP5 407 aaKnown RBP13.9□□□□□ -0.18
SNX13-206ENST00000474067 MLST8Q9BVC4 326 aa13.9□□□□□ -0.18
SNX13-206ENST00000474067 RPL35P42766 123 aaKnown RBP13.89□□□□□ -0.19
SNX13-206ENST00000474067 LAGE3Q14657 143 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms