RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ODF3L2Q3SX64 289 aa13.3□□□□□ -0.28
VARS2-206ENST00000473916 DMRTA1Q5VZB9 504 aa13.3□□□□□ -0.28
VARS2-206ENST00000473916 U3KQK5 164 aa13.3□□□□□ -0.28
VARS2-206ENST00000473916 SAP30O75446 220 aa13.3□□□□□ -0.28
VARS2-206ENST00000473916 HSBP1O75506 76 aa13.29□□□□□ -0.28
VARS2-206ENST00000473916 GATA1P15976 413 aaPredicted RBP13.29□□□□□ -0.28
VARS2-206ENST00000473916 FAM159AQ6UWV7 190 aa13.29□□□□□ -0.28
VARS2-206ENST00000473916 PRELID3AQ96N28 172 aa13.29□□□□□ -0.28
VARS2-206ENST00000473916 IGHV4-4A0A075B6R2 117 aa13.29□□□□□ -0.28
VARS2-206ENST00000473916 OR4C46A6NHA9 309 aa13.29□□□□□ -0.28
VARS2-206ENST00000473916 NPYP01303 97 aa13.29□□□□□ -0.28
VARS2-206ENST00000473916 ORMDL3Q8N138 153 aa13.29□□□□□ -0.28
VARS2-206ENST00000473916 SCRT2Q9NQ03 307 aa13.29□□□□□ -0.28
VARS2-206ENST00000473916 LOC389332A0A1B0GUA5 103 aa13.28□□□□□ -0.28
VARS2-206ENST00000473916 CRXO43186 299 aaPredicted RBP13.28□□□□□ -0.28
VARS2-206ENST00000473916 CD7P09564 240 aa13.28□□□□□ -0.28
VARS2-206ENST00000473916 CKS2P33552 79 aa13.28□□□□□ -0.28
VARS2-206ENST00000473916 SIGLEC8Q9NYZ4 499 aa13.28□□□□□ -0.28
VARS2-206ENST00000473916 TRAV26-2A0A0B4J265 109 aa13.27□□□□□ -0.28
VARS2-206ENST00000473916 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.27□□□□□ -0.28
VARS2-206ENST00000473916 PHLDA3Q9Y5J5 127 aa13.27□□□□□ -0.28
VARS2-206ENST00000473916 ATRQ13535 2644 aa13.27□□□□□ -0.29
VARS2-206ENST00000473916 CYSRT1A8MQ03 144 aa13.27□□□□□ -0.29
VARS2-206ENST00000473916 A8MTW9 85 aa13.27□□□□□ -0.29
VARS2-206ENST00000473916 LINC00614P0C842 121 aa13.27□□□□□ -0.29
VARS2-206ENST00000473916 TSPOP30536 169 aa13.27□□□□□ -0.29
VARS2-206ENST00000473916 CACNG7P62955 275 aa13.27□□□□□ -0.29
VARS2-206ENST00000473916 NDUFA11Q86Y39 141 aa13.27□□□□□ -0.29
VARS2-206ENST00000473916 TEP1Q99973 2627 aaKnown RBP13.26□□□□□ -0.29
VARS2-206ENST00000473916 TRAV25A0A0B4J276 109 aa13.26□□□□□ -0.29
VARS2-206ENST00000473916 IGHV1-24A0A0C4DH33 117 aa13.26□□□□□ -0.29
VARS2-206ENST00000473916 PRM2P04554 102 aa13.26□□□□□ -0.29
VARS2-206ENST00000473916 IFI27P40305 119 aaPredicted RBP13.26□□□□□ -0.29
VARS2-206ENST00000473916 Q8N1Y9 231 aa13.26□□□□□ -0.29
VARS2-206ENST00000473916 SPATA3Q8NHX4 192 aa13.26□□□□□ -0.29
VARS2-206ENST00000473916 MDFICQ9P1T7 246 aa13.26□□□□□ -0.29
VARS2-206ENST00000473916 KRTDAPP60985 99 aa13.25□□□□□ -0.29
VARS2-206ENST00000473916 DNLZQ5SXM8 178 aa13.25□□□□□ -0.29
VARS2-206ENST00000473916 SCGB1D1O95968 90 aa13.25□□□□□ -0.29
VARS2-206ENST00000473916 TDRG1Q3Y452 100 aa13.25□□□□□ -0.29
VARS2-206ENST00000473916 IGHV3-16A0A0C4DH30 117 aa13.24□□□□□ -0.29
VARS2-206ENST00000473916 CHCHD1Q96BP2 118 aaKnown RBP13.24□□□□□ -0.29
VARS2-206ENST00000473916 GSN-AS1Q9NRJ2 163 aa13.24□□□□□ -0.29
VARS2-206ENST00000473916 IGHV1OR15-1A0A075B7D0 117 aa13.23□□□□□ -0.29
VARS2-206ENST00000473916 MED14OSP0DP75 135 aa13.23□□□□□ -0.29
VARS2-206ENST00000473916 LINC00173Q6ZV60 143 aa13.23□□□□□ -0.29
VARS2-206ENST00000473916 C14orf178Q8N769 122 aaPredicted RBP13.23□□□□□ -0.29
VARS2-206ENST00000473916 WFDC10AQ9H1F0 79 aa13.23□□□□□ -0.29
VARS2-206ENST00000473916 JPT2Q9H910 190 aa13.23□□□□□ -0.29
VARS2-206ENST00000473916 IGLV1-51P01701 117 aa13.23□□□□□ -0.29
VARS2-206ENST00000473916 PRSS3P2Q8NHM4 247 aa13.23□□□□□ -0.29
VARS2-206ENST00000473916 PF4P02776 101 aa13.22□□□□□ -0.29
VARS2-206ENST00000473916 C3orf79P0CE67 100 aa13.22□□□□□ -0.29
VARS2-206ENST00000473916 HTN1P15515 57 aa13.22□□□□□ -0.29
VARS2-206ENST00000473916 Q8N976 141 aa13.22□□□□□ -0.29
VARS2-206ENST00000473916 SMIM15Q7Z3B0 74 aa13.22□□□□□ -0.29
VARS2-206ENST00000473916 LINC00482Q8N8I6 264 aa13.22□□□□□ -0.29
VARS2-206ENST00000473916 NOTCH3Q9UM47 2321 aa13.21□□□□□ -0.29
VARS2-206ENST00000473916 OR11H12B2RN74 326 aa13.21□□□□□ -0.29
VARS2-206ENST00000473916 NXPH4O95158 308 aa13.21□□□□□ -0.29
VARS2-206ENST00000473916 TNFRSF6BO95407 300 aa13.21□□□□□ -0.29
VARS2-206ENST00000473916 FA2HQ7L5A8 372 aa13.21□□□□□ -0.29
VARS2-206ENST00000473916 C9orf85Q96MD7 179 aa13.21□□□□□ -0.29
VARS2-206ENST00000473916 AP5S1Q9NUS5 200 aa13.2□□□□□ -0.3
VARS2-206ENST00000473916 NRACQ8N912 160 aa13.2□□□□□ -0.3
VARS2-206ENST00000473916 PPBPP02775 128 aa13.19□□□□□ -0.3
VARS2-206ENST00000473916 MGPP08493 103 aa13.19□□□□□ -0.3
VARS2-206ENST00000473916 SPATA12Q7Z6I5 190 aa13.19□□□□□ -0.3
VARS2-206ENST00000473916 A0A096LNJ9 63 aa13.18□□□□□ -0.3
VARS2-206ENST00000473916 CBY3A6NI87 242 aa13.18□□□□□ -0.3
VARS2-206ENST00000473916 STHQ8IWL8 128 aa13.18□□□□□ -0.3
VARS2-206ENST00000473916 PRO1933Q9H354 126 aa13.18□□□□□ -0.3
VARS2-206ENST00000473916 XCL2Q9UBD3 114 aa13.18□□□□□ -0.3
VARS2-206ENST00000473916 LURAP1LQ8IV03 231 aa13.18□□□□□ -0.3
VARS2-206ENST00000473916 OR2K2Q8NGT1 345 aa13.18□□□□□ -0.3
VARS2-206ENST00000473916 AP1S3Q96PC3 154 aa13.18□□□□□ -0.3
VARS2-206ENST00000473916 DPH3P1Q9H4G8 78 aa13.18□□□□□ -0.3
VARS2-206ENST00000473916 A0A087WWL8 130 aa13.17□□□□□ -0.3
VARS2-206ENST00000473916 TRPT1Q86TN4 253 aaKnown RBP13.17□□□□□ -0.3
VARS2-206ENST00000473916 C19orf73Q9NVV2 129 aa13.17□□□□□ -0.3
VARS2-206ENST00000473916 KIF25-AS1Q9Y6Z4 181 aa13.17□□□□□ -0.3
VARS2-206ENST00000473916 MAP1LC3AQ9H492 121 aa13.17□□□□□ -0.3
VARS2-206ENST00000473916 TRRAPQ9Y4A5 3859 aa13.17□□□□□ -0.3
VARS2-206ENST00000473916 LINC00315P59091 139 aa13.16□□□□□ -0.3
VARS2-206ENST00000473916 BEAN1Q3B7T3 259 aa13.16□□□□□ -0.3
VARS2-206ENST00000473916 ZNF664Q8N3J9 261 aa13.16□□□□□ -0.3
VARS2-206ENST00000473916 RPL39LQ96EH5 51 aaKnown RBP13.16□□□□□ -0.3
VARS2-206ENST00000473916 LEPROTL1O95214 131 aa13.15□□□□□ -0.3
VARS2-206ENST00000473916 RASL10AQ92737 203 aa13.15□□□□□ -0.3
VARS2-206ENST00000473916 CITED1Q99966 193 aa13.15□□□□□ -0.3
VARS2-206ENST00000473916 LAMTOR2Q9Y2Q5 125 aa13.15□□□□□ -0.3
VARS2-206ENST00000473916 MRAP2Q96G30 205 aa13.14□□□□□ -0.31
VARS2-206ENST00000473916 IGLV2-18A0A075B6J9 118 aa13.13□□□□□ -0.31
VARS2-206ENST00000473916 TRGV11A0A075B6L2 103 aa13.13□□□□□ -0.31
VARS2-206ENST00000473916 INSP01308 110 aa13.13□□□□□ -0.31
VARS2-206ENST00000473916 ATOH7Q8N100 152 aa13.13□□□□□ -0.31
VARS2-206ENST00000473916 LINC01587Q99440 93 aa13.13□□□□□ -0.31
VARS2-206ENST00000473916 MCRIP2Q9BUT9 160 aaKnown RBP13.13□□□□□ -0.31
VARS2-206ENST00000473916 NACAE9PAV3 2078 aa13.13□□□□□ -0.31
VARS2-206ENST00000473916 LINC00587B1AMM8 73 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms