RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PHLDA3Q9Y5J5 127 aa15.97■□□□□ 0.15
COL18A1-207ENST00000473212 MYMXA0A1B0GTQ4 84 aa15.97■□□□□ 0.15
COL18A1-207ENST00000473212 H3BMG7 143 aa15.97■□□□□ 0.15
COL18A1-207ENST00000473212 ANXA2RQ3ZCQ2 193 aa15.97■□□□□ 0.15
COL18A1-207ENST00000473212 C19orf54Q5BKX5 351 aa15.97■□□□□ 0.15
COL18A1-207ENST00000473212 IGHV4-38-2P0DP08 117 aa15.96■□□□□ 0.15
COL18A1-207ENST00000473212 ASIPP42127 132 aa15.96■□□□□ 0.15
COL18A1-207ENST00000473212 AMTNQ6UX39 209 aa15.96■□□□□ 0.15
COL18A1-207ENST00000473212 MOB4Q9Y3A3 225 aa15.96■□□□□ 0.15
COL18A1-207ENST00000473212 SRD5A1P18405 259 aa15.96■□□□□ 0.14
COL18A1-207ENST00000473212 RPL11P62913 178 aaKnown RBP15.96■□□□□ 0.14
COL18A1-207ENST00000473212 C20orf78Q9BR46 151 aa15.96■□□□□ 0.14
COL18A1-207ENST00000473212 FAM223BA6NKX1 122 aa15.95■□□□□ 0.14
COL18A1-207ENST00000473212 FAM223AQ8IWN6 122 aa15.95■□□□□ 0.14
COL18A1-207ENST00000473212 RNF223E7ERA6 249 aa15.95■□□□□ 0.14
COL18A1-207ENST00000473212 RNASE4P34096 147 aaKnown RBP15.95■□□□□ 0.14
COL18A1-207ENST00000473212 C2orf66Q6UXQ4 117 aa15.95■□□□□ 0.14
COL18A1-207ENST00000473212 CYSLTR1Q9Y271 337 aa15.95■□□□□ 0.14
COL18A1-207ENST00000473212 DOPEY2Q9Y3R5 2298 aa15.94■□□□□ 0.14
COL18A1-207ENST00000473212 IGHV4-61A0A0C4DH41 118 aa15.94■□□□□ 0.14
COL18A1-207ENST00000473212 GNRH2O43555 120 aa15.94■□□□□ 0.14
COL18A1-207ENST00000473212 SLC25A16P16260 332 aa15.94■□□□□ 0.14
COL18A1-207ENST00000473212 WFDC12Q8WWY7 111 aa15.94■□□□□ 0.14
COL18A1-207ENST00000473212 BAALCQ8WXS3 180 aa15.94■□□□□ 0.14
COL18A1-207ENST00000473212 MUC4Q99102 2169 aa15.94■□□□□ 0.14
COL18A1-207ENST00000473212 F8W1H4 67 aa15.94■□□□□ 0.14
COL18A1-207ENST00000473212 ZANQ9Y493 2812 aa15.93■□□□□ 0.14
COL18A1-207ENST00000473212 SOCS3O14543 225 aa15.93■□□□□ 0.14
COL18A1-207ENST00000473212 OVOL1O14753 267 aa15.93■□□□□ 0.14
COL18A1-207ENST00000473212 BLCAPP62952 87 aa15.93■□□□□ 0.14
COL18A1-207ENST00000473212 SORL1Q92673 2214 aa15.93■□□□□ 0.14
COL18A1-207ENST00000473212 RRN3P1Q2M238 152 aa15.93■□□□□ 0.14
COL18A1-207ENST00000473212 MTURNQ8N3F0 131 aa15.93■□□□□ 0.14
COL18A1-207ENST00000473212 SPOCK3Q9BQ16 436 aa15.93■□□□□ 0.14
COL18A1-207ENST00000473212 SPANXB1Q9NS25 103 aaPredicted RBP15.93■□□□□ 0.14
COL18A1-207ENST00000473212 LGALS1P09382 135 aaKnown RBP15.92■□□□□ 0.14
COL18A1-207ENST00000473212 PKD1L2Q7Z442 2459 aa15.92■□□□□ 0.14
COL18A1-207ENST00000473212 PRSS29PA6NIE9 313 aa15.92■□□□□ 0.14
COL18A1-207ENST00000473212 SH2D6Q7Z4S9 175 aa15.92■□□□□ 0.14
COL18A1-207ENST00000473212 IGHV1-69DA0A0B4J2H0 117 aa15.91■□□□□ 0.14
COL18A1-207ENST00000473212 IGHV1-69P01742 117 aa15.91■□□□□ 0.14
COL18A1-207ENST00000473212 GNLYP22749 145 aa15.91■□□□□ 0.14
COL18A1-207ENST00000473212 ATP6V0BQ99437 205 aa15.91■□□□□ 0.14
COL18A1-207ENST00000473212 PRADC1Q9BSG0 188 aa15.91■□□□□ 0.14
COL18A1-207ENST00000473212 NDUFA4O00483 81 aa15.9■□□□□ 0.14
COL18A1-207ENST00000473212 LINC01619G3V211 115 aa15.9■□□□□ 0.14
COL18A1-207ENST00000473212 RNASE3P12724 160 aaKnown RBP15.9■□□□□ 0.14
COL18A1-207ENST00000473212 ETDBQ3ZM63 59 aa15.9■□□□□ 0.14
COL18A1-207ENST00000473212 A0A1B0GWB2 263 aa15.89■□□□□ 0.13
COL18A1-207ENST00000473212 SCGB2A2Q13296 93 aa15.89■□□□□ 0.13
COL18A1-207ENST00000473212 H3BUX3 64 aa15.89■□□□□ 0.13
COL18A1-207ENST00000473212 PF4V1P10720 104 aa15.89■□□□□ 0.13
COL18A1-207ENST00000473212 FAM19A4Q96LR4 140 aa15.89■□□□□ 0.13
COL18A1-207ENST00000473212 USP9XQ93008 2570 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-207ENST00000473212 GTSF1LQ9H1H1 148 aa15.88■□□□□ 0.13
COL18A1-207ENST00000473212 ZNF815PA8K554 130 aa15.88■□□□□ 0.13
COL18A1-207ENST00000473212 TMEM95Q3KNT9 176 aa15.88■□□□□ 0.13
COL18A1-207ENST00000473212 GAGE13Q4V321 117 aa15.88■□□□□ 0.13
COL18A1-207ENST00000473212 TSSC4Q9Y5U2 329 aaPredicted RBP15.88■□□□□ 0.13
COL18A1-207ENST00000473212 USP9YO00507 2555 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-207ENST00000473212 HOXA3O43365 443 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-207ENST00000473212 DUSP14O95147 198 aaKnown RBP15.87■□□□□ 0.13
COL18A1-207ENST00000473212 CRIP2P52943 208 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-207ENST00000473212 SAMD13Q5VXD3 122 aa15.87■□□□□ 0.13
COL18A1-207ENST00000473212 MORN3Q6PF18 240 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-207ENST00000473212 PLEKHB2Q96CS7 222 aa15.87■□□□□ 0.13
COL18A1-207ENST00000473212 JPT2Q9H910 190 aa15.87■□□□□ 0.13
COL18A1-207ENST00000473212 CUBNO60494 3623 aa15.86■□□□□ 0.13
COL18A1-207ENST00000473212 MED14OSP0DP75 135 aa15.86■□□□□ 0.13
COL18A1-207ENST00000473212 CENPEQ02224 2701 aa15.86■□□□□ 0.13
COL18A1-207ENST00000473212 POLQO75417 2590 aa15.86■□□□□ 0.13
COL18A1-207ENST00000473212 SCGB1D4Q6XE38 83 aa15.86■□□□□ 0.13
COL18A1-207ENST00000473212 PRO0461Q9UI25 63 aa15.86■□□□□ 0.13
COL18A1-207ENST00000473212 AZU1P20160 251 aa15.85■□□□□ 0.13
COL18A1-207ENST00000473212 KLHL30-AS1Q8NEE0 82 aa15.85■□□□□ 0.13
COL18A1-207ENST00000473212 PGPEP1Q9NXJ5 209 aa15.85■□□□□ 0.13
COL18A1-207ENST00000473212 CRYGDP07320 174 aa15.85■□□□□ 0.13
COL18A1-207ENST00000473212 EMP1P54849 157 aa15.85■□□□□ 0.13
COL18A1-207ENST00000473212 CD300EQ496F6 205 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-207ENST00000473212 SPAG8Q99932 426 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-207ENST00000473212 RHPN1-AS1Q9BWJ2 59 aa15.85■□□□□ 0.13
COL18A1-207ENST00000473212 APRG1Q8IVJ8 170 aa15.84■□□□□ 0.13
COL18A1-207ENST00000473212 GAGE12HA6NDE8 117 aa15.84■□□□□ 0.13
COL18A1-207ENST00000473212 SIGMAR1Q99720 223 aa15.84■□□□□ 0.13
COL18A1-207ENST00000473212 CREBBPQ92793 2442 aa15.83■□□□□ 0.12
COL18A1-207ENST00000473212 J3QR89 54 aa15.83■□□□□ 0.12
COL18A1-207ENST00000473212 PPP1R17O96001 155 aa15.83■□□□□ 0.12
COL18A1-207ENST00000473212 TSHBP01222 138 aa15.83■□□□□ 0.12
COL18A1-207ENST00000473212 COX6B1P14854 86 aa15.83■□□□□ 0.12
COL18A1-207ENST00000473212 MRPL16Q9NX20 251 aaKnown RBP15.83■□□□□ 0.12
COL18A1-207ENST00000473212 LINC00315P59091 139 aa15.83■□□□□ 0.12
COL18A1-207ENST00000473212 SRSF9Q13242 221 aaKnown RBP eCLIP15.83■□□□□ 0.12
COL18A1-207ENST00000473212 TP53TG1Q9Y2A0 90 aa15.83■□□□□ 0.12
COL18A1-207ENST00000473212 KIF25-AS1Q9Y6Z4 181 aa15.83■□□□□ 0.12
COL18A1-207ENST00000473212 SMAGPQ0VAQ4 97 aa15.82■□□□□ 0.12
COL18A1-207ENST00000473212 C10orf99Q6UWK7 81 aa15.82■□□□□ 0.12
COL18A1-207ENST00000473212 PIEZO1Q92508 2521 aa15.82■□□□□ 0.12
COL18A1-207ENST00000473212 IGHV4-30-2A0A087WSY4 118 aa15.82■□□□□ 0.12
COL18A1-207ENST00000473212 C11orf86A6NJI1 115 aa15.82■□□□□ 0.12
COL18A1-207ENST00000473212 AVPP01185 164 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms