RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 PAFAH1B2P68402 229 aa4.73□□□□□ -1.65
HDAC1-205ENST00000472928 PSG3Q16557 428 aa4.73□□□□□ -1.65
HDAC1-205ENST00000472928 TMEM183BQ1AE95 376 aa4.73□□□□□ -1.65
HDAC1-205ENST00000472928 MAJINQ3KP22 176 aa4.73□□□□□ -1.65
HDAC1-205ENST00000472928 PRNTQ86SH4 94 aa4.73□□□□□ -1.65
HDAC1-205ENST00000472928 TMEM61Q8N0U2 210 aa4.73□□□□□ -1.65
HDAC1-205ENST00000472928 Q8TAT8 98 aa4.73□□□□□ -1.65
HDAC1-205ENST00000472928 LINC00476Q8WZB0 136 aa4.73□□□□□ -1.65
HDAC1-205ENST00000472928 MS4A6AQ9H2W1 248 aa4.73□□□□□ -1.65
HDAC1-205ENST00000472928 CLEC5AQ9NY25 188 aa4.73□□□□□ -1.65
HDAC1-205ENST00000472928 DNAH6Q9C0G6 4158 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 TRGV11A0A075B6L2 103 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 A8MZ25 164 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 TMEM238C9JI98 176 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 K7EQG2 157 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 CCL25O15444 150 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 SAP30O75446 220 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 LTAP01374 205 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 IGLV2-11P01706 119 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 ZNF688P0C7X2 276 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 ZNF705DP0CH99 300 aaPredicted RBP4.72□□□□□ -1.65
HDAC1-205ENST00000472928 ZNF705BP0CI00 300 aaPredicted RBP4.72□□□□□ -1.65
HDAC1-205ENST00000472928 ID1P41134 155 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 SNRPD3P62318 126 aaKnown RBP4.72□□□□□ -1.65
HDAC1-205ENST00000472928 ERCC8Q13216 396 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 PSMG4Q5JS54 123 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 ACTL10Q5JWF8 245 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 LCN12Q6JVE5 192 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 PRR27Q6MZM9 219 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 RBPMS2Q6ZRY4 209 aaKnown RBP4.72□□□□□ -1.65
HDAC1-205ENST00000472928 BAGE2Q86Y30 109 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 DCANP1Q8TF63 244 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 VGLL1Q99990 258 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 ALKBH7Q9BT30 221 aaPredicted RBP4.72□□□□□ -1.65
HDAC1-205ENST00000472928 CSTL1Q9H114 145 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 DKK2Q9UBU2 259 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 PSG8Q9UQ74 426 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 KLF12Q9Y4X4 402 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 LY96Q9Y6Y9 160 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 FAT2Q9NYQ8 4349 aa4.72□□□□□ -1.65
HDAC1-205ENST00000472928 TRBV6-1A0A0K0K1D8 114 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 RBAKDNA6NC62 111 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 FBLL1A6NHQ2 334 aaKnown RBP4.71□□□□□ -1.66
HDAC1-205ENST00000472928 H7BYZ3 331 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 IGLV2-8P01709 118 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 ESDP10768 282 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 DEFB1P60022 68 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 HIST1H1AQ02539 215 aaPredicted RBP4.71□□□□□ -1.66
HDAC1-205ENST00000472928 DEFB114Q30KQ6 69 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 TMEM78Q5T7P6 136 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 OR10J6PQ8NGY7 276 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 OCC1Q8TAD7 63 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 SMIM12Q96EX1 92 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 SFRP2Q96HF1 295 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 C8orf49Q96NF6 230 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 NDFIP1Q9BT67 221 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 RETNQ9HD89 108 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 DNAH2Q9P225 4427 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 DNAH17Q9UFH2 4485 aa4.71□□□□□ -1.66
HDAC1-205ENST00000472928 TRAV2A0A0B4J234 112 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 IZUMO1RA6ND01 250 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 OR4C46A6NHA9 309 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 F6UB75 175 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 CT45A10P0DMU9 189 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 TIRAPP58753 221 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 RPL19P84098 196 aaKnown RBP4.7□□□□□ -1.66
HDAC1-205ENST00000472928 OR4B1Q8NGF8 309 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 OR8A1Q8NGG7 326 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 OR10G8Q8NGN5 311 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 IL17DQ8TAD2 202 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 ZC2HC1AQ96GY0 325 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 SPAG8Q99932 426 aaPredicted RBP4.7□□□□□ -1.66
HDAC1-205ENST00000472928 VAMP8Q9BV40 100 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 RNASE7Q9H1E1 156 aaKnown RBP4.7□□□□□ -1.66
HDAC1-205ENST00000472928 SIGLEC8Q9NYZ4 499 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 UQCR10Q9UDW1 63 aa4.7□□□□□ -1.66
HDAC1-205ENST00000472928 TRAV25A0A0B4J276 109 aa4.69□□□□□ -1.66
HDAC1-205ENST00000472928 ZNF138P52744 262 aa4.69□□□□□ -1.66
HDAC1-205ENST00000472928 IBA57Q5T440 356 aaKnown RBP4.69□□□□□ -1.66
HDAC1-205ENST00000472928 PET117Q6UWS5 81 aa4.69□□□□□ -1.66
HDAC1-205ENST00000472928 C9orf47Q6ZRZ4 202 aa4.69□□□□□ -1.66
HDAC1-205ENST00000472928 MLST8Q9BVC4 326 aa4.69□□□□□ -1.66
HDAC1-205ENST00000472928 AGPAT4-IT1Q9H0P7 198 aa4.69□□□□□ -1.66
HDAC1-205ENST00000472928 MAP6D1Q9H9H5 199 aa4.69□□□□□ -1.66
HDAC1-205ENST00000472928 OSTCQ9NRP0 149 aa4.69□□□□□ -1.66
HDAC1-205ENST00000472928 ZNF492Q9P255 531 aa4.69□□□□□ -1.66
HDAC1-205ENST00000472928 MRPS16Q9Y3D3 137 aaKnown RBP4.69□□□□□ -1.66
HDAC1-205ENST00000472928 COX11Q9Y6N1 276 aa4.69□□□□□ -1.66
HDAC1-205ENST00000472928 A0A0J9YX75 114 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 CBY3A6NI87 242 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 KNCNA6PVL3 124 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 J3KRW8 73 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 SH2D1AO60880 128 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 LY6G6CO95867 125 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 IGKV3-20P01619 116 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 IGLV1-51P01701 117 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 P01737 135 aa4.68□□□□□ -1.66
HDAC1-205ENST00000472928 TCL1AP56279 114 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms