RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 PRAP1Q96NZ9 151 aa-1.22□□□□□ -2.6
COMMD3-209ENST00000471350 IGHV1-24A0A0C4DH33 117 aa-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 SLC25A4P12235 298 aa-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 CKS2P33552 79 aa-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 SDC2P34741 201 aa-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 CDKN2CP42773 168 aa-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 BLCAPP62952 87 aa-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 SSBP1Q04837 148 aaKnown RBP-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 RGS21Q2M5E4 152 aa-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 FAM74A4Q5TZK3 123 aa-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 C4orf33Q8N1A6 199 aa-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 OR4S1Q8NGB4 309 aa-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 LRTM1Q9HBL6 345 aa-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 NUP210LQ5VU65 1888 aa-1.23□□□□□ -2.61
COMMD3-209ENST00000471350 PLB1Q6P1J6 1458 aa-1.24□□□□□ -2.61
COMMD3-209ENST00000471350 TRBV27A0A0K0K1C4 114 aa-1.24□□□□□ -2.61
COMMD3-209ENST00000471350 K7EQZ3 153 aa-1.24□□□□□ -2.61
COMMD3-209ENST00000471350 ARF6P62330 175 aa-1.24□□□□□ -2.61
COMMD3-209ENST00000471350 RPL19P84098 196 aaKnown RBP-1.24□□□□□ -2.61
COMMD3-209ENST00000471350 NUBP2Q9Y5Y2 271 aa-1.24□□□□□ -2.61
COMMD3-209ENST00000471350 MXRA5Q9NR99 2828 aa-1.24□□□□□ -2.61
COMMD3-209ENST00000471350 LAMB1P07942 1786 aa-1.24□□□□□ -2.61
COMMD3-209ENST00000471350 PTPRGP23470 1445 aa-1.24□□□□□ -2.61
COMMD3-209ENST00000471350 TCOF1Q13428 1488 aaKnown RBP-1.24□□□□□ -2.61
COMMD3-209ENST00000471350 GVINP1Q7Z2Y8 2422 aa-1.25□□□□□ -2.61
COMMD3-209ENST00000471350 USH2AO75445 5202 aa-1.25□□□□□ -2.61
COMMD3-209ENST00000471350 MAP1LC3B2A6NCE7 125 aa-1.25□□□□□ -2.61
COMMD3-209ENST00000471350 MFSD11O43934 449 aa-1.25□□□□□ -2.61
COMMD3-209ENST00000471350 CSN2P05814 226 aa-1.25□□□□□ -2.61
COMMD3-209ENST00000471350 MORN4Q8NDC4 146 aa-1.25□□□□□ -2.61
COMMD3-209ENST00000471350 OR51A4Q8NGJ6 313 aa-1.25□□□□□ -2.61
COMMD3-209ENST00000471350 OR13C6PQ8NH95 151 aa-1.25□□□□□ -2.61
COMMD3-209ENST00000471350 MED11Q9P086 117 aa-1.25□□□□□ -2.61
COMMD3-209ENST00000471350 SPCS1Q9Y6A9 102 aa-1.25□□□□□ -2.61
COMMD3-209ENST00000471350 V9GYV3 84 aa-1.25□□□□□ -2.61
COMMD3-209ENST00000471350 PNMA8CA0A1B0GUJ8 204 aa-1.26□□□□□ -2.61
COMMD3-209ENST00000471350 TRDV1A0A1B0GX56 115 aa-1.26□□□□□ -2.61
COMMD3-209ENST00000471350 DEGS1O15121 323 aa-1.26□□□□□ -2.61
COMMD3-209ENST00000471350 PIN1P1O15428 100 aa-1.26□□□□□ -2.61
COMMD3-209ENST00000471350 CCL3L1P16619 93 aa-1.26□□□□□ -2.61
COMMD3-209ENST00000471350 LINC00305Q7Z4B0 112 aa-1.26□□□□□ -2.61
COMMD3-209ENST00000471350 BRK1Q8WUW1 75 aa-1.26□□□□□ -2.61
COMMD3-209ENST00000471350 PCF11O94913 1555 aaKnown RBP-1.26□□□□□ -2.61
COMMD3-209ENST00000471350 RYR3Q15413 4870 aa-1.26□□□□□ -2.61
COMMD3-209ENST00000471350 DOCK11Q5JSL3 2073 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 SVEP1Q4LDE5 3571 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 TRAV13-1A0A0B4J241 112 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 TRBV10-3A0A0K0K1G6 114 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 GABARAPH6UMI1 98 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 APOC4-APOC2K7ER74 178 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 NIPSNAP2O75323 286 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 OR8B8Q15620 311 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 LTC4SQ16873 150 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 NDUFA11Q86Y39 141 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 OTOSQ8NHW6 89 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 BCL9LQ86UU0 1499 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 HELZP42694 1942 aaKnown RBP-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 PLCE1Q9P212 2302 aa-1.27□□□□□ -2.61
COMMD3-209ENST00000471350 PRKDCP78527 4128 aaKnown RBP-1.28□□□□□ -2.61
COMMD3-209ENST00000471350 CXorf51AA0A1B0GTR3 108 aa-1.28□□□□□ -2.61
COMMD3-209ENST00000471350 H3BMG7 143 aa-1.28□□□□□ -2.61
COMMD3-209ENST00000471350 RBM3P98179 157 aaKnown RBP-1.28□□□□□ -2.61
COMMD3-209ENST00000471350 TEX29Q8N6K0 151 aa-1.28□□□□□ -2.61
COMMD3-209ENST00000471350 COX7B2Q8TF08 81 aa-1.28□□□□□ -2.61
COMMD3-209ENST00000471350 GINS3Q9BRX5 216 aa-1.28□□□□□ -2.61
COMMD3-209ENST00000471350 LXNQ9BS40 222 aa-1.28□□□□□ -2.61
COMMD3-209ENST00000471350 TAS2R8Q9NYW2 309 aa-1.28□□□□□ -2.61
COMMD3-209ENST00000471350 SS18L2Q9UHA2 77 aa-1.28□□□□□ -2.61
COMMD3-209ENST00000471350 LAMTOR2Q9Y2Q5 125 aa-1.28□□□□□ -2.61
COMMD3-209ENST00000471350 SETD2Q9BYW2 2564 aaPredicted RBP-1.28□□□□□ -2.61
COMMD3-209ENST00000471350 TRGV1A0A0A0MS02 117 aa-1.29□□□□□ -2.62
COMMD3-209ENST00000471350 TRAV2A0A0B4J234 112 aa-1.29□□□□□ -2.62
COMMD3-209ENST00000471350 IFNA1P01562 189 aa-1.29□□□□□ -2.62
COMMD3-209ENST00000471350 CRYGSP22914 178 aa-1.29□□□□□ -2.62
COMMD3-209ENST00000471350 AKR1D1P51857 326 aa-1.29□□□□□ -2.62
COMMD3-209ENST00000471350 ERVS71-1P61550 626 aa-1.29□□□□□ -2.62
COMMD3-209ENST00000471350 TMED2Q15363 201 aa-1.29□□□□□ -2.62
COMMD3-209ENST00000471350 OR2T2Q6IF00 324 aa-1.29□□□□□ -2.62
COMMD3-209ENST00000471350 CEP19Q96LK0 163 aa-1.29□□□□□ -2.62
COMMD3-209ENST00000471350 CARD19Q96LW7 228 aa-1.29□□□□□ -2.62
COMMD3-209ENST00000471350 STARD9Q9P2P6 4700 aa-1.3□□□□□ -2.62
COMMD3-209ENST00000471350 TECPR2O15040 1411 aa-1.3□□□□□ -2.62
COMMD3-209ENST00000471350 FAM135BQ49AJ0 1406 aa-1.3□□□□□ -2.62
COMMD3-209ENST00000471350 HBDP02042 147 aa-1.3□□□□□ -2.62
COMMD3-209ENST00000471350 TFF1P04155 84 aa-1.3□□□□□ -2.62
COMMD3-209ENST00000471350 PCBD1P61457 104 aa-1.3□□□□□ -2.62
COMMD3-209ENST00000471350 BASP1P80723 227 aaKnown RBP-1.3□□□□□ -2.62
COMMD3-209ENST00000471350 C3orf33Q6P1S2 294 aa-1.3□□□□□ -2.62
COMMD3-209ENST00000471350 DYDC1Q8WWB3 177 aa-1.3□□□□□ -2.62
COMMD3-209ENST00000471350 ADGBQ8N7X0 1667 aa-1.3□□□□□ -2.62
COMMD3-209ENST00000471350 UBR4Q5T4S7 5183 aa-1.31□□□□□ -2.62
COMMD3-209ENST00000471350 M0R2P5 195 aa-1.31□□□□□ -2.62
COMMD3-209ENST00000471350 NPFFO15130 113 aa-1.31□□□□□ -2.62
COMMD3-209ENST00000471350 S100A11P31949 105 aa-1.31□□□□□ -2.62
COMMD3-209ENST00000471350 MRPS15P82914 257 aaKnown RBP-1.31□□□□□ -2.62
COMMD3-209ENST00000471350 REEP5Q00765 189 aa-1.31□□□□□ -2.62
COMMD3-209ENST00000471350 PLGLB1Q02325 96 aa-1.31□□□□□ -2.62
COMMD3-209ENST00000471350 C20orf197Q8N268 126 aa-1.31□□□□□ -2.62
COMMD3-209ENST00000471350 FAM24BQ8N5W8 94 aa-1.31□□□□□ -2.62
COMMD3-209ENST00000471350 ERG28Q9UKR5 140 aa-1.31□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms