RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 SIRPDQ9H106 197 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 UBE2D3P61077 147 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 CD59P13987 128 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 CXCL5P42830 114 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 DEFB112Q30KQ8 113 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 C10orf105Q8TEF2 133 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 C9orf85Q96MD7 179 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 TRAV26-1A0A087WT03 109 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 TRBV6-6A0A0A6YYG2 114 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 MIR7-3HGQ8N6C7 128 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 X6R8D5 127 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 DEFB135Q30KP9 77 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 ATG2BQ96BY7 2078 aa5.39□□□□□ -1.55
BRCA1-210ENST00000471181 TRPM7Q96QT4 1865 aa5.38□□□□□ -1.55
BRCA1-210ENST00000471181 PLA2G1BP04054 148 aaKnown RBP5.38□□□□□ -1.55
BRCA1-210ENST00000471181 TMEM263Q8WUH6 116 aaKnown RBP5.38□□□□□ -1.55
BRCA1-210ENST00000471181 WFDC2Q14508 124 aa5.38□□□□□ -1.55
BRCA1-210ENST00000471181 ENHOQ6UWT2 76 aa5.38□□□□□ -1.55
BRCA1-210ENST00000471181 FXYD5Q96DB9 178 aa5.38□□□□□ -1.55
BRCA1-210ENST00000471181 IGLV3-12A0A075B6K2 115 aa5.38□□□□□ -1.55
BRCA1-210ENST00000471181 LOXP28300 417 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-210ENST00000471181 RPL39P62891 51 aaKnown RBP5.38□□□□□ -1.55
BRCA1-210ENST00000471181 Q8N9W7 124 aa5.38□□□□□ -1.55
BRCA1-210ENST00000471181 FAM19A5Q7Z5A7 132 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-210ENST00000471181 ZNF747Q9BV97 191 aa5.38□□□□□ -1.55
BRCA1-210ENST00000471181 VPREB3Q9UKI3 123 aa5.38□□□□□ -1.55
BRCA1-210ENST00000471181 TPRP12270 2363 aaKnown RBP5.37□□□□□ -1.55
BRCA1-210ENST00000471181 DIAPH2-AS1Q14236 149 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 C14orf177Q52M58 125 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 MYO7AQ13402 2215 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 FHL1Q13642 323 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 SPANXB1Q9NS25 103 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-210ENST00000471181 SCN2AQ99250 2005 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 ZNF726P1Q15940 193 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 C1orf195Q5TG92 126 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 C16orf54Q6UWD8 224 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 Q6ZVQ6 151 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 NFE4Q86UQ8 179 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 AGPAT4-IT1Q9H0P7 198 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 FRMPD3Q5JV73 1810 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 PIKFYVEQ9Y2I7 2098 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 K7EM74 188 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 WFDC13Q8IUB5 93 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 Q8N9L7 120 aa5.37□□□□□ -1.55
BRCA1-210ENST00000471181 J3QRE1 110 aa5.36□□□□□ -1.55
BRCA1-210ENST00000471181 PPDPFQ9H3Y8 114 aa5.36□□□□□ -1.55
BRCA1-210ENST00000471181 SNURFQ9Y675 71 aa5.36□□□□□ -1.55
BRCA1-210ENST00000471181 PDE6GP18545 87 aa5.36□□□□□ -1.55
BRCA1-210ENST00000471181 PRYO14603 147 aa5.36□□□□□ -1.55
BRCA1-210ENST00000471181 C17orf58Q2M2W7 97 aa5.36□□□□□ -1.55
BRCA1-210ENST00000471181 K7EN84 100 aa5.36□□□□□ -1.55
BRCA1-210ENST00000471181 WT1-ASQ06250 92 aa5.36□□□□□ -1.55
BRCA1-210ENST00000471181 C7orf33Q8WU49 177 aa5.36□□□□□ -1.55
BRCA1-210ENST00000471181 SLPIP03973 132 aa5.35□□□□□ -1.55
BRCA1-210ENST00000471181 ZNF236Q9UL36 1845 aa5.35□□□□□ -1.55
BRCA1-210ENST00000471181 COL11A1P12107 1806 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-210ENST00000471181 SCN1AP35498 2009 aa5.35□□□□□ -1.55
BRCA1-210ENST00000471181 TRBV7-3A0A075B6L6 115 aa5.35□□□□□ -1.55
BRCA1-210ENST00000471181 H3BUA1 57 aa5.35□□□□□ -1.55
BRCA1-210ENST00000471181 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-210ENST00000471181 PIK3CD-AS1Q5SR53 167 aa5.35□□□□□ -1.55
BRCA1-210ENST00000471181 C3orf84H3BNL1 204 aa5.35□□□□□ -1.55
BRCA1-210ENST00000471181 FXYD2P54710 66 aa5.35□□□□□ -1.55
BRCA1-210ENST00000471181 UBE2D2P62837 147 aa5.35□□□□□ -1.55
BRCA1-210ENST00000471181 PTH2Q96A98 100 aa5.35□□□□□ -1.55
BRCA1-210ENST00000471181 FAM222AQ5U5X8 452 aa5.35□□□□□ -1.55
BRCA1-210ENST00000471181 Q8NFD4 153 aa5.35□□□□□ -1.55
BRCA1-210ENST00000471181 SRCAPQ6ZRS2 3230 aa5.34□□□□□ -1.55
BRCA1-210ENST00000471181 RETNLBQ9BQ08 111 aa5.34□□□□□ -1.55
BRCA1-210ENST00000471181 TIMM17BO60830 172 aa5.34□□□□□ -1.55
BRCA1-210ENST00000471181 SMAD5-AS1Q9Y6J3 95 aa5.34□□□□□ -1.55
BRCA1-210ENST00000471181 WDR81Q562E7 1941 aa5.34□□□□□ -1.55
BRCA1-210ENST00000471181 TRBV27A0A0K0K1C4 114 aa5.34□□□□□ -1.55
BRCA1-210ENST00000471181 LINC00173Q6ZV60 143 aa5.34□□□□□ -1.55
BRCA1-210ENST00000471181 C1orf158Q8N1D5 194 aa5.34□□□□□ -1.55
BRCA1-210ENST00000471181 IL17DQ8TAD2 202 aa5.34□□□□□ -1.55
BRCA1-210ENST00000471181 FAM30AQ9NZY2 134 aa5.34□□□□□ -1.55
BRCA1-210ENST00000471181 RALGAPA1Q6GYQ0 2036 aa5.34□□□□□ -1.55
BRCA1-210ENST00000471181 SMCHD1A6NHR9 2005 aa5.34□□□□□ -1.56
BRCA1-210ENST00000471181 IGLC6P0CF74 106 aa5.34□□□□□ -1.56
BRCA1-210ENST00000471181 LINC00643Q86TS7 51 aa5.34□□□□□ -1.56
BRCA1-210ENST00000471181 Q8TCH9 128 aa5.34□□□□□ -1.56
BRCA1-210ENST00000471181 ZFAND3Q9H8U3 227 aa5.34□□□□□ -1.56
BRCA1-210ENST00000471181 WT1P19544 449 aaPredicted RBP5.33□□□□□ -1.56
BRCA1-210ENST00000471181 C11orf45Q8TAV5 145 aa5.33□□□□□ -1.56
BRCA1-210ENST00000471181 TTTY13Q9BZ97 58 aa5.33□□□□□ -1.56
BRCA1-210ENST00000471181 CRYGDP07320 174 aa5.33□□□□□ -1.56
BRCA1-210ENST00000471181 MED14OSP0DP75 135 aa5.33□□□□□ -1.56
BRCA1-210ENST00000471181 Q8N1Y9 231 aa5.33□□□□□ -1.56
BRCA1-210ENST00000471181 DCANP1Q8TF63 244 aa5.33□□□□□ -1.56
BRCA1-210ENST00000471181 IGLV9-49A0A0B4J1Y8 123 aa5.33□□□□□ -1.56
BRCA1-210ENST00000471181 QRFPP83859 136 aa5.33□□□□□ -1.56
BRCA1-210ENST00000471181 SIP14410 1827 aa5.33□□□□□ -1.56
BRCA1-210ENST00000471181 PLXNA1Q9UIW2 1896 aa5.33□□□□□ -1.56
BRCA1-210ENST00000471181 H3BT86 120 aa5.33□□□□□ -1.56
BRCA1-210ENST00000471181 Q6ZS49 121 aa5.33□□□□□ -1.56
BRCA1-210ENST00000471181 TOMM6Q96B49 74 aa5.32□□□□□ -1.56
BRCA1-210ENST00000471181 AJUBAQ96IF1 538 aa5.32□□□□□ -1.56
BRCA1-210ENST00000471181 MSRB1Q9NZV6 116 aa5.32□□□□□ -1.56
BRCA1-210ENST00000471181 MGAMO43451 1857 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms