RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 PHLDA3Q9Y5J5 127 aa12.63□□□□□ -0.39
SMARCD3-206ENST00000470588 TRAV9-2A0A087WT02 112 aa12.62□□□□□ -0.39
SMARCD3-206ENST00000470588 DEFB125Q8N687 156 aa12.62□□□□□ -0.39
SMARCD3-206ENST00000470588 OR2K2Q8NGT1 345 aa12.62□□□□□ -0.39
SMARCD3-206ENST00000470588 MRAP2Q96G30 205 aa12.62□□□□□ -0.39
SMARCD3-206ENST00000470588 CRLF1O75462 422 aa12.61□□□□□ -0.39
SMARCD3-206ENST00000470588 RNASE3P12724 160 aaKnown RBP12.61□□□□□ -0.39
SMARCD3-206ENST00000470588 SPATA12Q7Z6I5 190 aa12.61□□□□□ -0.39
SMARCD3-206ENST00000470588 DLX4Q92988 240 aaPredicted RBP12.61□□□□□ -0.39
SMARCD3-206ENST00000470588 TSSC4Q9Y5U2 329 aaPredicted RBP12.61□□□□□ -0.39
SMARCD3-206ENST00000470588 ZNF705AQ6ZN79 300 aaPredicted RBP12.61□□□□□ -0.39
SMARCD3-206ENST00000470588 A0A096LNJ9 63 aa12.6□□□□□ -0.39
SMARCD3-206ENST00000470588 TRAV12-3A0A0B4J271 114 aa12.6□□□□□ -0.39
SMARCD3-206ENST00000470588 M0R381 172 aa12.6□□□□□ -0.39
SMARCD3-206ENST00000470588 GAS8-AS1O95177 125 aa12.6□□□□□ -0.39
SMARCD3-206ENST00000470588 HBDP02042 147 aa12.6□□□□□ -0.39
SMARCD3-206ENST00000470588 CD28P10747 220 aa12.6□□□□□ -0.39
SMARCD3-206ENST00000470588 Q8N8P6 123 aa12.6□□□□□ -0.39
SMARCD3-206ENST00000470588 OR4C46A6NHA9 309 aa12.59□□□□□ -0.39
SMARCD3-206ENST00000470588 NXPH4O95158 308 aa12.59□□□□□ -0.39
SMARCD3-206ENST00000470588 GATA1P15976 413 aaPredicted RBP12.59□□□□□ -0.39
SMARCD3-206ENST00000470588 CDKN1BP46527 198 aa12.59□□□□□ -0.39
SMARCD3-206ENST00000470588 ATOH7Q8N100 152 aa12.59□□□□□ -0.39
SMARCD3-206ENST00000470588 DUX3Q96PT4 197 aa12.59□□□□□ -0.39
SMARCD3-206ENST00000470588 DPH3P1Q9H4G8 78 aa12.59□□□□□ -0.39
SMARCD3-206ENST00000470588 LBHQ53QV2 105 aaPredicted RBP12.58□□□□□ -0.39
SMARCD3-206ENST00000470588 NRACQ8N912 160 aa12.58□□□□□ -0.39
SMARCD3-206ENST00000470588 DYNLRB2Q8TF09 96 aa12.58□□□□□ -0.39
SMARCD3-206ENST00000470588 MTORP42345 2549 aa12.58□□□□□ -0.4
SMARCD3-206ENST00000470588 IGKV3-20P01619 116 aa12.58□□□□□ -0.4
SMARCD3-206ENST00000470588 DEFB114Q30KQ6 69 aa12.58□□□□□ -0.4
SMARCD3-206ENST00000470588 LINC01545Q5VT33 79 aa12.58□□□□□ -0.4
SMARCD3-206ENST00000470588 C11orf44Q8N8P7 122 aa12.58□□□□□ -0.4
SMARCD3-206ENST00000470588 A0A1W2PRX2 142 aa12.57□□□□□ -0.4
SMARCD3-206ENST00000470588 A8MTW9 85 aa12.57□□□□□ -0.4
SMARCD3-206ENST00000470588 IGLC3P0DOY3 106 aa12.57□□□□□ -0.4
SMARCD3-206ENST00000470588 FCER1GP30273 86 aa12.57□□□□□ -0.4
SMARCD3-206ENST00000470588 AMTNQ6UX39 209 aa12.57□□□□□ -0.4
SMARCD3-206ENST00000470588 UQCR10Q9UDW1 63 aa12.57□□□□□ -0.4
SMARCD3-206ENST00000470588 IGLV2-18A0A075B6J9 118 aa12.56□□□□□ -0.4
SMARCD3-206ENST00000470588 CD7P09564 240 aa12.56□□□□□ -0.4
SMARCD3-206ENST00000470588 DEFB131AP59861 70 aa12.56□□□□□ -0.4
SMARCD3-206ENST00000470588 MRPL52Q86TS9 123 aaKnown RBP12.56□□□□□ -0.4
SMARCD3-206ENST00000470588 RAX2Q96IS3 184 aa12.56□□□□□ -0.4
SMARCD3-206ENST00000470588 CITED2Q99967 270 aaPredicted RBP12.56□□□□□ -0.4
SMARCD3-206ENST00000470588 TMEM61Q8N0U2 210 aa12.56□□□□□ -0.4
SMARCD3-206ENST00000470588 C14orf178Q8N769 122 aaPredicted RBP12.56□□□□□ -0.4
SMARCD3-206ENST00000470588 POM121L12Q8N7R1 296 aa12.56□□□□□ -0.4
SMARCD3-206ENST00000470588 AP1S3Q96PC3 154 aa12.56□□□□□ -0.4
SMARCD3-206ENST00000470588 IGHV1OR15-1A0A075B7D0 117 aa12.55□□□□□ -0.4
SMARCD3-206ENST00000470588 TRAV25A0A0B4J276 109 aa12.55□□□□□ -0.4
SMARCD3-206ENST00000470588 CCL24O00175 119 aa12.55□□□□□ -0.4
SMARCD3-206ENST00000470588 SPRY2O43597 315 aa12.55□□□□□ -0.4
SMARCD3-206ENST00000470588 PROK1P58294 105 aa12.55□□□□□ -0.4
SMARCD3-206ENST00000470588 FHL3Q13643 280 aa12.55□□□□□ -0.4
SMARCD3-206ENST00000470588 SPINK13Q1W4C9 94 aa12.55□□□□□ -0.4
SMARCD3-206ENST00000470588 MAJINQ3KP22 176 aa12.55□□□□□ -0.4
SMARCD3-206ENST00000470588 TRAV12-2A0A075B6T6 113 aa12.54□□□□□ -0.4
SMARCD3-206ENST00000470588 TRAV26-2A0A0B4J265 109 aa12.54□□□□□ -0.4
SMARCD3-206ENST00000470588 IGHV3-16A0A0C4DH30 117 aa12.54□□□□□ -0.4
SMARCD3-206ENST00000470588 M0R143 59 aa12.54□□□□□ -0.4
SMARCD3-206ENST00000470588 PPP1R17O96001 155 aa12.54□□□□□ -0.4
SMARCD3-206ENST00000470588 HLA-DRB4P13762 266 aa12.54□□□□□ -0.4
SMARCD3-206ENST00000470588 IGLL1P15814 213 aa12.54□□□□□ -0.4
SMARCD3-206ENST00000470588 IFI27L1Q96BM0 104 aa12.54□□□□□ -0.4
SMARCD3-206ENST00000470588 C20orf78Q9BR46 151 aa12.54□□□□□ -0.4
SMARCD3-206ENST00000470588 HLA-DRB4X5D2U9 266 aa12.54□□□□□ -0.4
SMARCD3-206ENST00000470588 KNCNA6PVL3 124 aa12.53□□□□□ -0.4
SMARCD3-206ENST00000470588 H3BMM0 161 aa12.53□□□□□ -0.4
SMARCD3-206ENST00000470588 C9orf85Q96MD7 179 aa12.53□□□□□ -0.4
SMARCD3-206ENST00000470588 C2orf88Q9BSF0 95 aa12.53□□□□□ -0.4
SMARCD3-206ENST00000470588 ST20Q9HBF5 79 aa12.53□□□□□ -0.4
SMARCD3-206ENST00000470588 HSBP1L1C9JCN9 74 aa12.53□□□□□ -0.4
SMARCD3-206ENST00000470588 FXYD7P58549 80 aa12.53□□□□□ -0.4
SMARCD3-206ENST00000470588 LGALS9BQ3B8N2 356 aa12.53□□□□□ -0.4
SMARCD3-206ENST00000470588 LGALS9CQ6DKI2 356 aa12.53□□□□□ -0.4
SMARCD3-206ENST00000470588 SPAG8Q99932 426 aaPredicted RBP12.53□□□□□ -0.4
SMARCD3-206ENST00000470588 KIF25-AS1Q9Y6Z4 181 aa12.53□□□□□ -0.4
SMARCD3-206ENST00000470588 H0Y8G0 127 aa12.52□□□□□ -0.41
SMARCD3-206ENST00000470588 SMIM17P0DL12 118 aa12.52□□□□□ -0.41
SMARCD3-206ENST00000470588 LAGE3Q14657 143 aa12.52□□□□□ -0.41
SMARCD3-206ENST00000470588 RASL10AQ92737 203 aa12.52□□□□□ -0.41
SMARCD3-206ENST00000470588 CD300EQ496F6 205 aaPredicted RBP12.51□□□□□ -0.41
SMARCD3-206ENST00000470588 SYT8Q8NBV8 401 aa12.51□□□□□ -0.41
SMARCD3-206ENST00000470588 HIVEP1P15822 2718 aa12.51□□□□□ -0.41
SMARCD3-206ENST00000470588 TRGV11A0A075B6L2 103 aa12.51□□□□□ -0.41
SMARCD3-206ENST00000470588 MGPP08493 103 aa12.51□□□□□ -0.41
SMARCD3-206ENST00000470588 LINC00315P59091 139 aa12.51□□□□□ -0.41
SMARCD3-206ENST00000470588 HIST2H2BDQ6DRA6 164 aa12.51□□□□□ -0.41
SMARCD3-206ENST00000470588 Q8N1Y9 231 aa12.51□□□□□ -0.41
SMARCD3-206ENST00000470588 MCRIP2Q9BUT9 160 aaKnown RBP12.51□□□□□ -0.41
SMARCD3-206ENST00000470588 SMIM2Q9BVW6 85 aa12.51□□□□□ -0.41
SMARCD3-206ENST00000470588 SNHG12Q9BXW3 62 aa12.51□□□□□ -0.41
SMARCD3-206ENST00000470588 MAP6D1Q9H9H5 199 aa12.51□□□□□ -0.41
SMARCD3-206ENST00000470588 NSD1Q96L73 2696 aaPredicted RBP12.5□□□□□ -0.41
SMARCD3-206ENST00000470588 K7EMI3 77 aa12.5□□□□□ -0.41
SMARCD3-206ENST00000470588 Q6ZN92 141 aa12.5□□□□□ -0.41
SMARCD3-206ENST00000470588 TMEM158Q8WZ71 300 aa12.5□□□□□ -0.41
SMARCD3-206ENST00000470588 MDFICQ9P1T7 246 aa12.5□□□□□ -0.41
SMARCD3-206ENST00000470588 hDV102S1A0JD36 115 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms