RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 GAGE12IP0CL82 117 aa10.55□□□□□ -0.72
CDC42SE1-203ENST00000470278 MED14OSP0DP75 135 aa10.55□□□□□ -0.72
CDC42SE1-203ENST00000470278 S100A4P26447 101 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-203ENST00000470278 OR5I1Q13606 314 aa10.55□□□□□ -0.72
CDC42SE1-203ENST00000470278 PIK3CD-AS1Q5SR53 167 aa10.55□□□□□ -0.72
CDC42SE1-203ENST00000470278 FAM210BQ96KR6 192 aa10.55□□□□□ -0.72
CDC42SE1-203ENST00000470278 KRTAP17-1Q9BYP8 105 aa10.55□□□□□ -0.72
CDC42SE1-203ENST00000470278 SCRT2Q9NQ03 307 aa10.55□□□□□ -0.72
CDC42SE1-203ENST00000470278 TRGV2A0A075B6R0 118 aa10.54□□□□□ -0.72
CDC42SE1-203ENST00000470278 P01737 135 aa10.54□□□□□ -0.72
CDC42SE1-203ENST00000470278 TCTAP57738 103 aa10.54□□□□□ -0.72
CDC42SE1-203ENST00000470278 RPL19P84098 196 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-203ENST00000470278 LINC01551Q86U37 167 aa10.54□□□□□ -0.72
CDC42SE1-203ENST00000470278 DAZAP1Q96EP5 407 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-203ENST00000470278 TMSB15BA0A087X1C1 80 aa10.53□□□□□ -0.72
CDC42SE1-203ENST00000470278 H3BVH4 76 aa10.53□□□□□ -0.72
CDC42SE1-203ENST00000470278 RPS20P60866 119 aaKnown RBP10.53□□□□□ -0.72
CDC42SE1-203ENST00000470278 ZNF876PQ49A33 203 aa10.53□□□□□ -0.72
CDC42SE1-203ENST00000470278 FAM231DQ6ZW35 169 aa10.53□□□□□ -0.72
CDC42SE1-203ENST00000470278 MUC4Q99102 2169 aa10.53□□□□□ -0.72
CDC42SE1-203ENST00000470278 GRIFINA4D1Z8 144 aa10.52□□□□□ -0.73
CDC42SE1-203ENST00000470278 ARMS2P0C7Q2 107 aa10.52□□□□□ -0.73
CDC42SE1-203ENST00000470278 SOHLH1Q5JUK2 328 aa10.52□□□□□ -0.73
CDC42SE1-203ENST00000470278 UQCC3Q6UW78 93 aa10.52□□□□□ -0.73
CDC42SE1-203ENST00000470278 NAT8Q9UHE5 227 aa10.52□□□□□ -0.73
CDC42SE1-203ENST00000470278 VPS13DQ5THJ4 4388 aa10.52□□□□□ -0.73
CDC42SE1-203ENST00000470278 TRAV4A0A0B4J268 109 aa10.51□□□□□ -0.73
CDC42SE1-203ENST00000470278 XKRY2A2RUG3 117 aa10.51□□□□□ -0.73
CDC42SE1-203ENST00000470278 SNAI2O43623 268 aa10.51□□□□□ -0.73
CDC42SE1-203ENST00000470278 OR5AL1P0C617 328 aa10.51□□□□□ -0.73
CDC42SE1-203ENST00000470278 TMEM241Q24JQ0 296 aa10.51□□□□□ -0.73
CDC42SE1-203ENST00000470278 NUDT10Q8NFP7 164 aa10.51□□□□□ -0.73
CDC42SE1-203ENST00000470278 OR2D3Q8NGH3 330 aa10.51□□□□□ -0.73
CDC42SE1-203ENST00000470278 NUDT11Q96G61 164 aa10.51□□□□□ -0.73
CDC42SE1-203ENST00000470278 SSBP4Q9BWG4 385 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-203ENST00000470278 RNASE7Q9H1E1 156 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-203ENST00000470278 RPP21Q9H633 154 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-203ENST00000470278 IGHV4-4A0A075B6R2 117 aa10.5□□□□□ -0.73
CDC42SE1-203ENST00000470278 CIDEAO60543 219 aa10.5□□□□□ -0.73
CDC42SE1-203ENST00000470278 NXPH4O95158 308 aa10.5□□□□□ -0.73
CDC42SE1-203ENST00000470278 SFTA3P0C7M3 94 aa10.5□□□□□ -0.73
CDC42SE1-203ENST00000470278 HTN3P15516 51 aa10.5□□□□□ -0.73
CDC42SE1-203ENST00000470278 HOXA5P20719 270 aa10.5□□□□□ -0.73
CDC42SE1-203ENST00000470278 CT83Q5H943 113 aa10.5□□□□□ -0.73
CDC42SE1-203ENST00000470278 PHLDA3Q9Y5J5 127 aa10.5□□□□□ -0.73
CDC42SE1-203ENST00000470278 HECTD4Q9Y4D8 3996 aa10.5□□□□□ -0.73
CDC42SE1-203ENST00000470278 LINC00862A6NCI5 91 aa10.49□□□□□ -0.73
CDC42SE1-203ENST00000470278 IGLL5B9A064 214 aa10.49□□□□□ -0.73
CDC42SE1-203ENST00000470278 F5H768 121 aa10.49□□□□□ -0.73
CDC42SE1-203ENST00000470278 IGLC6P0CF74 106 aa10.49□□□□□ -0.73
CDC42SE1-203ENST00000470278 RPL23P62829 140 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-203ENST00000470278 ZFP82Q8N141 532 aa10.49□□□□□ -0.73
CDC42SE1-203ENST00000470278 POM121L12Q8N7R1 296 aa10.49□□□□□ -0.73
CDC42SE1-203ENST00000470278 SYT8Q8NBV8 401 aa10.49□□□□□ -0.73
CDC42SE1-203ENST00000470278 ISOC2Q96AB3 205 aa10.49□□□□□ -0.73
CDC42SE1-203ENST00000470278 DNAH6Q9C0G6 4158 aa10.49□□□□□ -0.73
CDC42SE1-203ENST00000470278 A0A1W2PPQ1 181 aa10.48□□□□□ -0.73
CDC42SE1-203ENST00000470278 A8MWV9 139 aa10.48□□□□□ -0.73
CDC42SE1-203ENST00000470278 H3BNG1 76 aa10.48□□□□□ -0.73
CDC42SE1-203ENST00000470278 RS1O15537 224 aa10.48□□□□□ -0.73
CDC42SE1-203ENST00000470278 ERVFC1-1P60608 527 aa10.48□□□□□ -0.73
CDC42SE1-203ENST00000470278 TMEM88Q6PEY1 159 aa10.48□□□□□ -0.73
CDC42SE1-203ENST00000470278 ZNF479Q96JC4 524 aa10.48□□□□□ -0.73
CDC42SE1-203ENST00000470278 OSTCQ9NRP0 149 aa10.48□□□□□ -0.73
CDC42SE1-203ENST00000470278 NACAE9PAV3 2078 aa10.48□□□□□ -0.73
CDC42SE1-203ENST00000470278 SLAQ13239 276 aa10.47□□□□□ -0.73
CDC42SE1-203ENST00000470278 CFAP126Q5VTH2 177 aa10.47□□□□□ -0.73
CDC42SE1-203ENST00000470278 DMRTA1Q5VZB9 504 aa10.47□□□□□ -0.73
CDC42SE1-203ENST00000470278 FER1L6-AS1Q8NA97 138 aa10.47□□□□□ -0.73
CDC42SE1-203ENST00000470278 C15orf53Q8NAA6 179 aa10.47□□□□□ -0.73
CDC42SE1-203ENST00000470278 OR4C5Q8NGB2 326 aa10.47□□□□□ -0.73
CDC42SE1-203ENST00000470278 OR10AG1Q8NH19 301 aa10.47□□□□□ -0.73
CDC42SE1-203ENST00000470278 APLNQ9ULZ1 77 aa10.47□□□□□ -0.73
CDC42SE1-203ENST00000470278 F2Z2F3 143 aa10.46□□□□□ -0.73
CDC42SE1-203ENST00000470278 GATCO43716 136 aaKnown RBP10.46□□□□□ -0.73
CDC42SE1-203ENST00000470278 IGHV3-53P01767 116 aa10.46□□□□□ -0.73
CDC42SE1-203ENST00000470278 GZMBP10144 247 aa10.46□□□□□ -0.73
CDC42SE1-203ENST00000470278 CTRLP40313 264 aa10.46□□□□□ -0.73
CDC42SE1-203ENST00000470278 FHL2Q14192 279 aa10.46□□□□□ -0.73
CDC42SE1-203ENST00000470278 ADIRFQ15847 76 aa10.46□□□□□ -0.73
CDC42SE1-203ENST00000470278 ZFP2Q6ZN57 461 aa10.46□□□□□ -0.73
CDC42SE1-203ENST00000470278 COMMD7Q86VX2 200 aa10.46□□□□□ -0.73
CDC42SE1-203ENST00000470278 SFRP2Q96HF1 295 aa10.46□□□□□ -0.73
CDC42SE1-203ENST00000470278 CNFNQ9BYD5 112 aa10.46□□□□□ -0.73
CDC42SE1-203ENST00000470278 PRO0255Q9UI72 69 aa10.46□□□□□ -0.73
CDC42SE1-203ENST00000470278 TRAV26-1A0A087WT03 109 aa10.45□□□□□ -0.74
CDC42SE1-203ENST00000470278 M0R381 172 aa10.45□□□□□ -0.74
CDC42SE1-203ENST00000470278 PNRC1Q12796 327 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE1-203ENST00000470278 UFSP1Q6NVU6 142 aa10.45□□□□□ -0.74
CDC42SE1-203ENST00000470278 C15orf54Q8N8G6 183 aa10.45□□□□□ -0.74
CDC42SE1-203ENST00000470278 LINC00476Q8WZB0 136 aa10.45□□□□□ -0.74
CDC42SE1-203ENST00000470278 TRGV4A0A0C4DH28 118 aa10.44□□□□□ -0.74
CDC42SE1-203ENST00000470278 FAM231BA6NCW3 169 aa10.44□□□□□ -0.74
CDC42SE1-203ENST00000470278 A8MWL6 223 aa10.44□□□□□ -0.74
CDC42SE1-203ENST00000470278 RHODO00212 210 aa10.44□□□□□ -0.74
CDC42SE1-203ENST00000470278 CRYBA4P53673 196 aa10.44□□□□□ -0.74
CDC42SE1-203ENST00000470278 CACNG7P62955 275 aa10.44□□□□□ -0.74
CDC42SE1-203ENST00000470278 SPANXN1Q5VSR9 72 aa10.44□□□□□ -0.74
CDC42SE1-203ENST00000470278 GTSF1Q8WW33 167 aa10.44□□□□□ -0.74
CDC42SE1-203ENST00000470278 VSIG2Q96IQ7 327 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms