RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 LY6EQ16553 131 aa10.27□□□□□ -0.77
BRCA1-209ENST00000470026 DAZ1Q9NQZ3 744 aaKnown RBP10.27□□□□□ -0.77
BRCA1-209ENST00000470026 CHTOPQ9Y3Y2 248 aaKnown RBP10.27□□□□□ -0.77
BRCA1-209ENST00000470026 TRBV7-3A0A075B6L6 115 aa10.26□□□□□ -0.77
BRCA1-209ENST00000470026 E9PLD3 99 aa10.26□□□□□ -0.77
BRCA1-209ENST00000470026 G3V4G9 280 aa10.26□□□□□ -0.77
BRCA1-209ENST00000470026 GNRH2O43555 120 aa10.26□□□□□ -0.77
BRCA1-209ENST00000470026 BLCAPP62952 87 aa10.26□□□□□ -0.77
BRCA1-209ENST00000470026 Q6ZS46 218 aa10.26□□□□□ -0.77
BRCA1-209ENST00000470026 K7ERJ3 54 aa10.25□□□□□ -0.77
BRCA1-209ENST00000470026 PF4V1P10720 104 aa10.25□□□□□ -0.77
BRCA1-209ENST00000470026 C2orf66Q6UXQ4 117 aa10.25□□□□□ -0.77
BRCA1-209ENST00000470026 BAALCQ8WXS3 180 aa10.25□□□□□ -0.77
BRCA1-209ENST00000470026 SVEP1Q4LDE5 3571 aa10.25□□□□□ -0.77
BRCA1-209ENST00000470026 A0A1B0GWB2 263 aa10.25□□□□□ -0.77
BRCA1-209ENST00000470026 NHP2Q9NX24 153 aaKnown RBP10.25□□□□□ -0.77
BRCA1-209ENST00000470026 ASH1LQ9NR48 2969 aaKnown RBP10.25□□□□□ -0.77
BRCA1-209ENST00000470026 MYMXA0A1B0GTQ4 84 aa10.24□□□□□ -0.77
BRCA1-209ENST00000470026 SAMD13Q5VXD3 122 aa10.24□□□□□ -0.77
BRCA1-209ENST00000470026 IGLL5B9A064 214 aa10.24□□□□□ -0.77
BRCA1-209ENST00000470026 DCANP1Q8TF63 244 aa10.24□□□□□ -0.77
BRCA1-209ENST00000470026 MUC4Q99102 2169 aa10.24□□□□□ -0.77
BRCA1-209ENST00000470026 OR11H12B2RN74 326 aa10.23□□□□□ -0.77
BRCA1-209ENST00000470026 MSMBP08118 114 aa10.23□□□□□ -0.77
BRCA1-209ENST00000470026 MGPP08493 103 aa10.23□□□□□ -0.77
BRCA1-209ENST00000470026 RPL11P62913 178 aaKnown RBP10.23□□□□□ -0.77
BRCA1-209ENST00000470026 C12orf74Q32Q52 190 aa10.23□□□□□ -0.77
BRCA1-209ENST00000470026 OR11H1Q8NG94 326 aa10.23□□□□□ -0.77
BRCA1-209ENST00000470026 OR11H2Q8NH07 326 aa10.23□□□□□ -0.77
BRCA1-209ENST00000470026 CCL19Q99731 98 aa10.23□□□□□ -0.77
BRCA1-209ENST00000470026 PRSS29PA6NIE9 313 aa10.22□□□□□ -0.77
BRCA1-209ENST00000470026 LINC01549A6NIU2 74 aa10.22□□□□□ -0.77
BRCA1-209ENST00000470026 POLR2KP53803 58 aaKnown RBP10.22□□□□□ -0.77
BRCA1-209ENST00000470026 LCNL1Q6ZST4 164 aa10.22□□□□□ -0.77
BRCA1-209ENST00000470026 CSTL1Q9H114 145 aa10.22□□□□□ -0.77
BRCA1-209ENST00000470026 AKAP6Q13023 2319 aa10.22□□□□□ -0.77
BRCA1-209ENST00000470026 IGHV4-30-2A0A087WSY4 118 aa10.22□□□□□ -0.77
BRCA1-209ENST00000470026 CLEC2AQ6UVW9 174 aa10.22□□□□□ -0.77
BRCA1-209ENST00000470026 ODF3Q96PU9 254 aa10.22□□□□□ -0.77
BRCA1-209ENST00000470026 CRYGDP07320 174 aa10.21□□□□□ -0.77
BRCA1-209ENST00000470026 COX6B1P14854 86 aa10.21□□□□□ -0.77
BRCA1-209ENST00000470026 ID1P41134 155 aa10.21□□□□□ -0.77
BRCA1-209ENST00000470026 SELENOKQ9Y6D0 94 aa10.21□□□□□ -0.77
BRCA1-209ENST00000470026 IGIPA6NJ69 53 aa10.21□□□□□ -0.78
BRCA1-209ENST00000470026 LGALS1P09382 135 aaKnown RBP10.21□□□□□ -0.78
BRCA1-209ENST00000470026 PSMB8P28062 276 aa10.21□□□□□ -0.78
BRCA1-209ENST00000470026 COTL1Q14019 142 aa10.21□□□□□ -0.78
BRCA1-209ENST00000470026 FOXI2Q6ZQN5 318 aa10.21□□□□□ -0.78
BRCA1-209ENST00000470026 AGRNO00468 2067 aa10.2□□□□□ -0.78
BRCA1-209ENST00000470026 IGKV3-7A0A075B6H7 116 aa10.2□□□□□ -0.78
BRCA1-209ENST00000470026 TSHBP01222 138 aa10.2□□□□□ -0.78
BRCA1-209ENST00000470026 EDN2P20800 178 aa10.2□□□□□ -0.78
BRCA1-209ENST00000470026 HIST1H4GQ99525 98 aa10.2□□□□□ -0.78
BRCA1-209ENST00000470026 TRBV6-5A0A0K0K1A5 114 aa10.19□□□□□ -0.78
BRCA1-209ENST00000470026 AVPP01185 164 aa10.19□□□□□ -0.78
BRCA1-209ENST00000470026 SUMO4Q6EEV6 95 aa10.19□□□□□ -0.78
BRCA1-209ENST00000470026 FAM159AQ6UWV7 190 aa10.19□□□□□ -0.78
BRCA1-209ENST00000470026 ZNF479Q96JC4 524 aa10.19□□□□□ -0.78
BRCA1-209ENST00000470026 C9orf85Q96MD7 179 aa10.19□□□□□ -0.78
BRCA1-209ENST00000470026 PRADC1Q9BSG0 188 aa10.19□□□□□ -0.78
BRCA1-209ENST00000470026 CYSLTR1Q9Y271 337 aa10.19□□□□□ -0.78
BRCA1-209ENST00000470026 DUSP14O95147 198 aaKnown RBP10.19□□□□□ -0.78
BRCA1-209ENST00000470026 ATP5J2P56134 94 aa10.19□□□□□ -0.78
BRCA1-209ENST00000470026 RIPPLY3P57055 190 aa10.19□□□□□ -0.78
BRCA1-209ENST00000470026 ZFP2Q6ZN57 461 aa10.19□□□□□ -0.78
BRCA1-209ENST00000470026 IGLV4-69A0A075B6H9 119 aa10.18□□□□□ -0.78
BRCA1-209ENST00000470026 TMEM89A2RUT3 159 aa10.18□□□□□ -0.78
BRCA1-209ENST00000470026 LGALS9O00182 355 aa10.18□□□□□ -0.78
BRCA1-209ENST00000470026 SRD5A1P18405 259 aa10.18□□□□□ -0.78
BRCA1-209ENST00000470026 RRN3P1Q2M238 152 aa10.18□□□□□ -0.78
BRCA1-209ENST00000470026 ZFHX3Q15911 3703 aa10.18□□□□□ -0.78
BRCA1-209ENST00000470026 B4DSR2 109 aa10.18□□□□□ -0.78
BRCA1-209ENST00000470026 VCYO14598 125 aa10.18□□□□□ -0.78
BRCA1-209ENST00000470026 PAPPA-AS1Q5QFB9 102 aa10.18□□□□□ -0.78
BRCA1-209ENST00000470026 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
BRCA1-209ENST00000470026 JPT2Q9H910 190 aa10.18□□□□□ -0.78
BRCA1-209ENST00000470026 TRBV27A0A0K0K1C4 114 aa10.17□□□□□ -0.78
BRCA1-209ENST00000470026 F8W1H4 67 aa10.17□□□□□ -0.78
BRCA1-209ENST00000470026 GATA3P23771 443 aa10.17□□□□□ -0.78
BRCA1-209ENST00000470026 TMEM141Q96I45 108 aa10.17□□□□□ -0.78
BRCA1-209ENST00000470026 IGHV3-16A0A0C4DH30 117 aa10.16□□□□□ -0.78
BRCA1-209ENST00000470026 RNF152Q8N8N0 203 aa10.16□□□□□ -0.78
BRCA1-209ENST00000470026 TP53TG1Q9Y2A0 90 aa10.16□□□□□ -0.78
BRCA1-209ENST00000470026 C11orf86A6NJI1 115 aa10.16□□□□□ -0.78
BRCA1-209ENST00000470026 CD7P09564 240 aa10.16□□□□□ -0.78
BRCA1-209ENST00000470026 PMVKQ15126 192 aa10.16□□□□□ -0.78
BRCA1-209ENST00000470026 MORN3Q6PF18 240 aaPredicted RBP10.16□□□□□ -0.78
BRCA1-209ENST00000470026 SPTAN1Q13813 2472 aaKnown RBP10.16□□□□□ -0.78
BRCA1-209ENST00000470026 TRAV12-3A0A0B4J271 114 aa10.15□□□□□ -0.78
BRCA1-209ENST00000470026 A0A0J9YX75 114 aa10.15□□□□□ -0.78
BRCA1-209ENST00000470026 TMEM95Q3KNT9 176 aa10.15□□□□□ -0.78
BRCA1-209ENST00000470026 TEX48A0A1B0GUV7 120 aa10.15□□□□□ -0.79
BRCA1-209ENST00000470026 ZNF815PA8K554 130 aa10.15□□□□□ -0.79
BRCA1-209ENST00000470026 K7EQG2 157 aa10.15□□□□□ -0.79
BRCA1-209ENST00000470026 KIR2DL4Q99706 377 aa10.15□□□□□ -0.79
BRCA1-209ENST00000470026 SDHAF1A6NFY7 115 aa10.14□□□□□ -0.79
BRCA1-209ENST00000470026 UBE2D1P51668 147 aa10.14□□□□□ -0.79
BRCA1-209ENST00000470026 PRO0461Q9UI25 63 aa10.14□□□□□ -0.79
BRCA1-209ENST00000470026 A0A087WWL8 130 aa10.13□□□□□ -0.79
BRCA1-209ENST00000470026 ZNF876PQ49A33 203 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms