RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 SOHLH1Q5JUK2 328 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 SLC51BQ86UW2 128 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 SLC25A29Q8N8R3 303 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 C5orf17Q8NAS9 161 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 C9orf85Q96MD7 179 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 MAP1LC3BQ9GZQ8 125 aa6.22□□□□□ -1.41
SHROOM3-203ENST00000469923 TMSB15BA0A087X1C1 80 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 TRAV4A0A0B4J268 109 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 IFNA7P01567 189 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 MRPL23Q16540 153 aaKnown RBP6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 ZNF876PQ49A33 203 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 ZNF506Q5JVG8 444 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 DMRTA1Q5VZB9 504 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 NEGR1Q7Z3B1 354 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 C14orf178Q8N769 122 aaPredicted RBP6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 NHLRC2Q8NBF2 726 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 FAM213BQ8TBF2 198 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 MBD3L1Q8WWY6 194 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 ZC2HC1AQ96GY0 325 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 SPXQ9BT56 116 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 ARL2-SNX15V9GYD0 113 aa6.21□□□□□ -1.42
SHROOM3-203ENST00000469923 TRGV11A0A075B6L2 103 aa6.2□□□□□ -1.42
SHROOM3-203ENST00000469923 MUC21A0A0G2JKD1 596 aa6.2□□□□□ -1.42
SHROOM3-203ENST00000469923 MUC21A0A140T8X8 626 aa6.2□□□□□ -1.42
SHROOM3-203ENST00000469923 M0R036 132 aa6.2□□□□□ -1.42
SHROOM3-203ENST00000469923 PAGE4O60829 102 aa6.2□□□□□ -1.42
SHROOM3-203ENST00000469923 XGP55808 180 aa6.2□□□□□ -1.42
SHROOM3-203ENST00000469923 WFDC2Q14508 124 aa6.2□□□□□ -1.42
SHROOM3-203ENST00000469923 CYB561D1Q8N8Q1 229 aa6.2□□□□□ -1.42
SHROOM3-203ENST00000469923 SFT2D1Q8WV19 159 aa6.2□□□□□ -1.42
SHROOM3-203ENST00000469923 SDF2L1Q9HCN8 221 aa6.2□□□□□ -1.42
SHROOM3-203ENST00000469923 SERTM2A0A1B0GWG4 89 aa6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 K7EQM0 130 aa6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 PEX7O00628 323 aa6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 IGHV3-30P01768 117 aa6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 IGHV3-33P01772 117 aa6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 IGHV3-30-3P0DP02 117 aa6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 IGHV3-30-5P0DP03 117 aa6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 TPT1P13693 172 aaKnown RBP6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 RPL19P84098 196 aaKnown RBP6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 SMUG1Q53HV7 270 aa6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 CST9LP1Q5W188 147 aa6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 UFSP1Q6NVU6 142 aa6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 TEX261Q6UWH6 196 aa6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 STOML3Q8TAV4 291 aa6.19□□□□□ -1.42
SHROOM3-203ENST00000469923 FLG2Q5D862 2391 aaPredicted RBP6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 GAGE12JA6NER3 117 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 KRBOX1C9JBD0 128 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 SH2D1AO60880 128 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 PFN1P07737 140 aaKnown RBP6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 H2AFB1P0C5Y9 115 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 SRIP30626 198 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 SSTP61278 116 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 EIF5AP63241 154 aaKnown RBP6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 GAGE1Q13065 139 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 GAGE4Q13068 117 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 GAGE5Q13069 117 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 GAGE13Q4V321 117 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 ALKAL2Q6UX46 152 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 Q86TA4 180 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 MAPKAPK5-AS1Q8N8E1 139 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 NDFIP1Q9BT67 221 aa6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 LRP1Q07954 4544 aaKnown RBP6.18□□□□□ -1.42
SHROOM3-203ENST00000469923 A0A087WTM6 91 aa6.17□□□□□ -1.42
SHROOM3-203ENST00000469923 A0A087WWL8 130 aa6.17□□□□□ -1.42
SHROOM3-203ENST00000469923 A0A1W2PPQ1 181 aa6.17□□□□□ -1.42
SHROOM3-203ENST00000469923 UMAD1C9J7I0 102 aa6.17□□□□□ -1.42
SHROOM3-203ENST00000469923 H3BVH4 76 aa6.17□□□□□ -1.42
SHROOM3-203ENST00000469923 ORM1P02763 201 aa6.17□□□□□ -1.42
SHROOM3-203ENST00000469923 SMR3BP02814 79 aaPredicted RBP6.17□□□□□ -1.42
SHROOM3-203ENST00000469923 ARMS2P0C7Q2 107 aa6.17□□□□□ -1.42
SHROOM3-203ENST00000469923 SAPCD1Q5SSQ6 148 aa6.17□□□□□ -1.42
SHROOM3-203ENST00000469923 HIST1H2BAQ96A08 127 aa6.17□□□□□ -1.42
SHROOM3-203ENST00000469923 SCRT2Q9NQ03 307 aa6.17□□□□□ -1.42
SHROOM3-203ENST00000469923 PKHD1L1Q86WI1 4243 aa6.17□□□□□ -1.42
SHROOM3-203ENST00000469923 FAT3Q8TDW7 4589 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 SCO2A0A1W2PP80 73 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 LRCOL1A6NCL2 159 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 FBLL1A6NHQ2 334 aaKnown RBP6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 FABP5P3A8MUU1 101 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 B4DEV8 164 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 CRYGDP07320 174 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 BTF3P20290 206 aaKnown RBP6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 SLAQ13239 276 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 KCNS1Q96KK3 526 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 NKX6-2Q9C056 277 aaPredicted RBP6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 PARLQ9H300 379 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 Q9HAA7 133 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 MSRB1Q9NZV6 116 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 FAM30AQ9NZY2 134 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 LY96Q9Y6Y9 160 aa6.16□□□□□ -1.42
SHROOM3-203ENST00000469923 LECT2O14960 151 aa6.15□□□□□ -1.42
SHROOM3-203ENST00000469923 SULT1A2P50226 295 aa6.15□□□□□ -1.42
SHROOM3-203ENST00000469923 PPT1P50897 306 aa6.15□□□□□ -1.42
SHROOM3-203ENST00000469923 LINC01620Q4KN68 170 aa6.15□□□□□ -1.42
SHROOM3-203ENST00000469923 TTC32Q5I0X7 151 aa6.15□□□□□ -1.42
SHROOM3-203ENST00000469923 DAZ4Q86SG3 579 aaKnown RBP6.15□□□□□ -1.42
SHROOM3-203ENST00000469923 PCNPQ8WW12 178 aaKnown RBP6.15□□□□□ -1.42
SHROOM3-203ENST00000469923 DERL1Q9BUN8 251 aa6.15□□□□□ -1.42
SHROOM3-203ENST00000469923 DAZ3Q9NR90 486 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms