RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 KLLNB2CW77 178 aa11□□□□□ -0.65
CBWD3-205ENST00000469687 ZNF688P0C7X2 276 aa11□□□□□ -0.65
CBWD3-205ENST00000469687 DPH3P1Q9H4G8 78 aa11□□□□□ -0.65
CBWD3-205ENST00000469687 IGKCP01834 107 aa10.99□□□□□ -0.65
CBWD3-205ENST00000469687 GTSCR1Q86UQ5 136 aa10.99□□□□□ -0.65
CBWD3-205ENST00000469687 MRPL35Q9NZE8 188 aaKnown RBP10.99□□□□□ -0.65
CBWD3-205ENST00000469687 ZNF580Q9UK33 172 aa10.99□□□□□ -0.65
CBWD3-205ENST00000469687 SUMO2P61956 95 aaKnown RBP10.99□□□□□ -0.65
CBWD3-205ENST00000469687 ADAMTSL5Q6ZMM2 481 aa10.99□□□□□ -0.65
CBWD3-205ENST00000469687 DUX5Q96PT3 197 aa10.99□□□□□ -0.65
CBWD3-205ENST00000469687 TMEM160Q9NX00 188 aa10.99□□□□□ -0.65
CBWD3-205ENST00000469687 TRAV12-3A0A0B4J271 114 aa10.98□□□□□ -0.65
CBWD3-205ENST00000469687 IGKV3-20P01619 116 aa10.98□□□□□ -0.65
CBWD3-205ENST00000469687 COX6B1P14854 86 aa10.98□□□□□ -0.65
CBWD3-205ENST00000469687 PSMG4Q5JS54 123 aa10.98□□□□□ -0.65
CBWD3-205ENST00000469687 MYOZ3Q8TDC0 251 aa10.98□□□□□ -0.65
CBWD3-205ENST00000469687 JPT2Q9H910 190 aa10.98□□□□□ -0.65
CBWD3-205ENST00000469687 ATP5LO75964 103 aa10.97□□□□□ -0.65
CBWD3-205ENST00000469687 SYNJ2BPP57105 145 aa10.97□□□□□ -0.65
CBWD3-205ENST00000469687 ZC2HC1BQ5TFG8 222 aa10.97□□□□□ -0.65
CBWD3-205ENST00000469687 TRAV8-6A0A0B4J262 113 aa10.97□□□□□ -0.65
CBWD3-205ENST00000469687 TRBV7-9A0A0J9YWB2 115 aa10.97□□□□□ -0.65
CBWD3-205ENST00000469687 DPM2O94777 84 aa10.97□□□□□ -0.65
CBWD3-205ENST00000469687 ID1P41134 155 aa10.97□□□□□ -0.65
CBWD3-205ENST00000469687 OR9G4Q8NGQ1 327 aa10.97□□□□□ -0.65
CBWD3-205ENST00000469687 DEFB104AQ8WTQ1 72 aa10.97□□□□□ -0.65
CBWD3-205ENST00000469687 BEX4Q9NWD9 120 aaPredicted RBP10.97□□□□□ -0.65
CBWD3-205ENST00000469687 TRAV12-2A0A075B6T6 113 aa10.96□□□□□ -0.65
CBWD3-205ENST00000469687 IGHV4OR15-8A0A075B7B6 117 aa10.96□□□□□ -0.65
CBWD3-205ENST00000469687 A0A087WW49 117 aa10.96□□□□□ -0.65
CBWD3-205ENST00000469687 MED14OSP0DP75 135 aa10.96□□□□□ -0.65
CBWD3-205ENST00000469687 AMMECR1LQ6DCA0 310 aa10.96□□□□□ -0.65
CBWD3-205ENST00000469687 NEGR1Q7Z3B1 354 aa10.96□□□□□ -0.65
CBWD3-205ENST00000469687 NAV2Q8IVL1 2488 aa10.96□□□□□ -0.65
CBWD3-205ENST00000469687 AP1S3Q96PC3 154 aa10.96□□□□□ -0.65
CBWD3-205ENST00000469687 VPREB3Q9UKI3 123 aa10.96□□□□□ -0.65
CBWD3-205ENST00000469687 J3QLI3 93 aa10.96□□□□□ -0.66
CBWD3-205ENST00000469687 LINC00315P59091 139 aa10.96□□□□□ -0.66
CBWD3-205ENST00000469687 FAM159AQ6UWV7 190 aa10.96□□□□□ -0.66
CBWD3-205ENST00000469687 ZNF702PQ9H963 129 aa10.96□□□□□ -0.66
CBWD3-205ENST00000469687 AKAP9Q99996 3911 aa10.95□□□□□ -0.66
CBWD3-205ENST00000469687 CREBBPQ92793 2442 aa10.95□□□□□ -0.66
CBWD3-205ENST00000469687 CD7P09564 240 aa10.95□□□□□ -0.66
CBWD3-205ENST00000469687 IGHV4-31P0DP07 118 aa10.95□□□□□ -0.66
CBWD3-205ENST00000469687 SEC11AP67812 179 aa10.95□□□□□ -0.66
CBWD3-205ENST00000469687 KIF25-AS1Q9Y6Z4 181 aa10.95□□□□□ -0.66
CBWD3-205ENST00000469687 CUBNO60494 3623 aa10.95□□□□□ -0.66
CBWD3-205ENST00000469687 SIVA1O15304 175 aa10.94□□□□□ -0.66
CBWD3-205ENST00000469687 HOXA3O43365 443 aaPredicted RBP10.94□□□□□ -0.66
CBWD3-205ENST00000469687 NXPH4O95158 308 aa10.94□□□□□ -0.66
CBWD3-205ENST00000469687 HSD52Q0P140 79 aa10.94□□□□□ -0.66
CBWD3-205ENST00000469687 OR4C5Q8NGB2 326 aa10.94□□□□□ -0.66
CBWD3-205ENST00000469687 TLN2Q9Y4G6 2542 aa10.94□□□□□ -0.66
CBWD3-205ENST00000469687 A0A087WWL8 130 aa10.94□□□□□ -0.66
CBWD3-205ENST00000469687 A0A087WX48 190 aa10.94□□□□□ -0.66
CBWD3-205ENST00000469687 K7EP13 123 aa10.94□□□□□ -0.66
CBWD3-205ENST00000469687 FSHBP01225 129 aa10.94□□□□□ -0.66
CBWD3-205ENST00000469687 Q6YL49 198 aa10.94□□□□□ -0.66
CBWD3-205ENST00000469687 C18orf65Q6ZTR6 163 aa10.94□□□□□ -0.66
CBWD3-205ENST00000469687 C20orf78Q9BR46 151 aa10.94□□□□□ -0.66
CBWD3-205ENST00000469687 NAA38Q9BRA0 125 aaKnown RBP10.94□□□□□ -0.66
CBWD3-205ENST00000469687 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.93□□□□□ -0.66
CBWD3-205ENST00000469687 K7EQG2 157 aa10.93□□□□□ -0.66
CBWD3-205ENST00000469687 ZNF843Q8N446 348 aa10.93□□□□□ -0.66
CBWD3-205ENST00000469687 TOMM6Q96B49 74 aa10.93□□□□□ -0.66
CBWD3-205ENST00000469687 A0A0J9YX75 114 aa10.93□□□□□ -0.66
CBWD3-205ENST00000469687 LGALS1P09382 135 aaKnown RBP10.93□□□□□ -0.66
CBWD3-205ENST00000469687 HOXD3P31249 432 aaPredicted RBP10.93□□□□□ -0.66
CBWD3-205ENST00000469687 ORMDL2Q53FV1 153 aa10.93□□□□□ -0.66
CBWD3-205ENST00000469687 SCGB3A1Q96QR1 104 aa10.93□□□□□ -0.66
CBWD3-205ENST00000469687 CSTL1Q9H114 145 aa10.93□□□□□ -0.66
CBWD3-205ENST00000469687 PRRC2AP48634 2157 aaKnown RBP10.92□□□□□ -0.66
CBWD3-205ENST00000469687 TMEM89A2RUT3 159 aa10.92□□□□□ -0.66
CBWD3-205ENST00000469687 SPINK13Q1W4C9 94 aa10.92□□□□□ -0.66
CBWD3-205ENST00000469687 DEFB136Q30KP8 78 aa10.92□□□□□ -0.66
CBWD3-205ENST00000469687 MAPKAPK5-AS1Q8N8E1 139 aa10.92□□□□□ -0.66
CBWD3-205ENST00000469687 MDFICQ9P1T7 246 aa10.92□□□□□ -0.66
CBWD3-205ENST00000469687 HIST2H2BDQ6DRA6 164 aa10.92□□□□□ -0.66
CBWD3-205ENST00000469687 C2orf66Q6UXQ4 117 aa10.92□□□□□ -0.66
CBWD3-205ENST00000469687 POM121L12Q8N7R1 296 aa10.92□□□□□ -0.66
CBWD3-205ENST00000469687 RNASE8Q8TDE3 154 aaKnown RBP10.92□□□□□ -0.66
CBWD3-205ENST00000469687 MYO9AB2RTY4 2548 aa10.91□□□□□ -0.66
CBWD3-205ENST00000469687 APCP25054 2843 aa10.91□□□□□ -0.66
CBWD3-205ENST00000469687 EPG5Q9HCE0 2579 aa10.91□□□□□ -0.66
CBWD3-205ENST00000469687 TRBV25-1A0A075B6N4 114 aa10.91□□□□□ -0.66
CBWD3-205ENST00000469687 SNRPD3P62318 126 aaKnown RBP10.91□□□□□ -0.66
CBWD3-205ENST00000469687 SUMO4Q6EEV6 95 aa10.91□□□□□ -0.66
CBWD3-205ENST00000469687 RAB37Q96AX2 223 aa10.91□□□□□ -0.66
CBWD3-205ENST00000469687 JMJD8Q96S16 334 aa10.91□□□□□ -0.66
CBWD3-205ENST00000469687 SAMD13Q5VXD3 122 aa10.9□□□□□ -0.66
CBWD3-205ENST00000469687 CHAC1Q9BUX1 264 aa10.9□□□□□ -0.66
CBWD3-205ENST00000469687 F8VRH5 84 aa10.9□□□□□ -0.66
CBWD3-205ENST00000469687 ELANEP08246 267 aa10.9□□□□□ -0.66
CBWD3-205ENST00000469687 FOSL1P15407 271 aa10.9□□□□□ -0.66
CBWD3-205ENST00000469687 FXYD2P54710 66 aa10.9□□□□□ -0.66
CBWD3-205ENST00000469687 Q5PR19 223 aa10.9□□□□□ -0.66
CBWD3-205ENST00000469687 Q8N1Y9 231 aa10.9□□□□□ -0.66
CBWD3-205ENST00000469687 NEXN-AS1Q8NBZ9 246 aa10.9□□□□□ -0.66
CBWD3-205ENST00000469687 IGHV3-16A0A0C4DH30 117 aa10.89□□□□□ -0.67
CBWD3-205ENST00000469687 A6NDN8 102 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms