RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 FUNDC2Q9BWH2 189 aa3.28□□□□□ -1.88
PTPN4-209ENST00000469511 JPT2Q9H910 190 aa3.28□□□□□ -1.88
PTPN4-209ENST00000469511 CRCT1Q9UGL9 99 aa3.28□□□□□ -1.88
PTPN4-209ENST00000469511 TIMM9Q9Y5J7 89 aa3.28□□□□□ -1.88
PTPN4-209ENST00000469511 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
PTPN4-209ENST00000469511 DUXBA0A1W2PPF3 345 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 FABP12A6NFH5 140 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 F6UZH7 168 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 EIF3GO75821 320 aaKnown RBP eCLIP3.27□□□□□ -1.89
PTPN4-209ENST00000469511 SFT2D2O95562 160 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 HLA-DQA1P01909 254 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 OR10J4P0C629 311 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 CAMLGP49069 296 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 PRR3P79522 188 aaKnown RBP3.27□□□□□ -1.89
PTPN4-209ENST00000469511 TMEM75Q8N9X5 138 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 SMIM8Q96KF7 97 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 SLC25A2Q9BXI2 301 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 C20orf85Q9H1P6 137 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 MCUBQ9NWR8 336 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 PRELID1Q9Y255 219 aa3.27□□□□□ -1.89
PTPN4-209ENST00000469511 FAM24AA6NFZ4 105 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 FNDC10F2Z333 226 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 NBEAP1P0C6P0 100 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 ANXA3P12429 323 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 INPP1P49441 399 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 ZNF80P51504 273 aaPredicted RBP3.26□□□□□ -1.89
PTPN4-209ENST00000469511 SRPXP78539 464 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 SSBP1Q04837 148 aaKnown RBP3.26□□□□□ -1.89
PTPN4-209ENST00000469511 GAGE2BQ13066 116 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 SRSF9Q13242 221 aaKnown RBP eCLIP3.26□□□□□ -1.89
PTPN4-209ENST00000469511 ZNF876PQ49A33 203 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 GAGE2EQ4V326 116 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 TMEM128Q5BJH2 165 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 ZNF506Q5JVG8 444 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 FFAR4Q5NUL3 377 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 GAGE2AQ6NT46 116 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 Q75L30 129 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 MIR17HGQ75NE6 70 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 CYB561D1Q8N8Q1 229 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 LYPD6BQ8NI32 183 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 SPACA4Q8TDM5 124 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 TMED6Q8WW62 240 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 RMI2Q96E14 147 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 DPH3Q96FX2 82 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 ZC2HC1AQ96GY0 325 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 SLC39A9Q9NUM3 307 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 TMEM14CQ9P0S9 112 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 GAGE2DQ9UEU5 116 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 SCP2D1Q9UJQ7 156 aa3.26□□□□□ -1.89
PTPN4-209ENST00000469511 C7orf66A4D0T2 115 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 CTDSPLO15194 276 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 CST7O76096 145 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 VPREB1P12018 145 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 RNASE3P12724 160 aaKnown RBP3.25□□□□□ -1.89
PTPN4-209ENST00000469511 IL18Q14116 193 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 C14orf177Q52M58 125 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 CLPSL2Q6UWE3 100 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 Q6ZRG5 221 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 S100A7AQ86SG5 101 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 C15orf54Q8N8G6 183 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 GTSF1Q8WW33 167 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 FXYD5Q96DB9 178 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 C2orf50Q96LR7 162 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 SGK494Q96LW2 274 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 LINC00479Q96M42 142 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 C9orf85Q96MD7 179 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 SCGB3A2Q96PL1 93 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 BCL7BQ9BQE9 202 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 PARLQ9H300 379 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 GPN1Q9HCN4 374 aaPredicted RBP3.25□□□□□ -1.89
PTPN4-209ENST00000469511 PLAC8Q9NZF1 115 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 RNF24Q9Y225 148 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 WDR83OSQ9Y284 106 aa3.25□□□□□ -1.89
PTPN4-209ENST00000469511 TRBV7-9A0A0J9YWB2 115 aa3.24□□□□□ -1.89
PTPN4-209ENST00000469511 RGS5O15539 181 aa3.24□□□□□ -1.89
PTPN4-209ENST00000469511 MGST1P10620 155 aaKnown RBP3.24□□□□□ -1.89
PTPN4-209ENST00000469511 RPL29P47914 159 aaKnown RBP3.24□□□□□ -1.89
PTPN4-209ENST00000469511 RANP62826 216 aaKnown RBP3.24□□□□□ -1.89
PTPN4-209ENST00000469511 RPL19P84098 196 aaKnown RBP3.24□□□□□ -1.89
PTPN4-209ENST00000469511 PDE6HQ13956 83 aa3.24□□□□□ -1.89
PTPN4-209ENST00000469511 MPV17L2Q567V2 206 aa3.24□□□□□ -1.89
PTPN4-209ENST00000469511 UFSP1Q6NVU6 142 aa3.24□□□□□ -1.89
PTPN4-209ENST00000469511 HSD17B11Q8NBQ5 300 aa3.24□□□□□ -1.89
PTPN4-209ENST00000469511 OR1L4Q8NGR5 311 aa3.24□□□□□ -1.89
PTPN4-209ENST00000469511 OR51M1Q9H341 326 aa3.24□□□□□ -1.89
PTPN4-209ENST00000469511 C11orf1Q9H5F2 150 aa3.24□□□□□ -1.89
PTPN4-209ENST00000469511 FLVCR2Q9UPI3 526 aa3.24□□□□□ -1.89
PTPN4-209ENST00000469511 URGCP-MRPS24S4R325 110 aa3.24□□□□□ -1.89
PTPN4-209ENST00000469511 IGLV10-54A0A075B6I4 117 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 A0A087WX48 190 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 IGKV2-24A0A0C4DH68 120 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 UBE2L5PA0A1B0GUS4 154 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 C9orf170A2RU37 121 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 H7C1H1 209 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 TSC22D2O75157 780 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 GNG5P63218 68 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 MRPS10P82664 201 aaKnown RBP3.23□□□□□ -1.89
PTPN4-209ENST00000469511 UBE2V1Q13404 147 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 RAB31Q13636 194 aa3.23□□□□□ -1.89
PTPN4-209ENST00000469511 SPCS2Q15005 226 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms