RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 SURF2Q15527 256 aaPredicted RBP2.92□□□□□ -1.94
VPS8-219ENST00000469479 RNASE10Q5GAN6 216 aaKnown RBP2.92□□□□□ -1.94
VPS8-219ENST00000469479 UBE2NLQ5JXB2 153 aa2.92□□□□□ -1.94
VPS8-219ENST00000469479 ATRAIDQ6UW56 229 aa2.92□□□□□ -1.94
VPS8-219ENST00000469479 DPPA3Q6W0C5 159 aa2.92□□□□□ -1.94
VPS8-219ENST00000469479 ZNF664Q8N3J9 261 aa2.92□□□□□ -1.94
VPS8-219ENST00000469479 OR4D10Q8NGI6 311 aa2.92□□□□□ -1.94
VPS8-219ENST00000469479 DPH3Q96FX2 82 aa2.92□□□□□ -1.94
VPS8-219ENST00000469479 TXNL4BQ9NX01 149 aaKnown RBP2.92□□□□□ -1.94
VPS8-219ENST00000469479 PSORS1C2Q9UIG4 136 aa2.92□□□□□ -1.94
VPS8-219ENST00000469479 C14orf166Q9Y224 244 aaKnown RBP2.92□□□□□ -1.94
VPS8-219ENST00000469479 PRELID1Q9Y255 219 aa2.92□□□□□ -1.94
VPS8-219ENST00000469479 A0A087WX48 190 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.91□□□□□ -1.94
VPS8-219ENST00000469479 LINC00854A0A1B0GVQ3 168 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 PGPA6NDG6 321 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 HIST1H1EP10412 219 aaKnown RBP2.91□□□□□ -1.94
VPS8-219ENST00000469479 MGST1P10620 155 aaKnown RBP2.91□□□□□ -1.94
VPS8-219ENST00000469479 SSTP61278 116 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 NCS1P62166 190 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 SRPXP78539 464 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 PRR3P79522 188 aaKnown RBP2.91□□□□□ -1.94
VPS8-219ENST00000469479 SP6Q3SY56 376 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 LRRC37A5PQ49AS3 106 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 TMEM78Q5T7P6 136 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 SDIM1Q6ZPB5 146 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 CYP2G1PQ6ZSU1 146 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 DAZ4Q86SG3 579 aaKnown RBP2.91□□□□□ -1.94
VPS8-219ENST00000469479 LHFPL1Q86WI0 220 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 Q8TAT8 98 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 GLYATL2Q8WU03 294 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 FAM19A4Q96LR4 140 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 PARD6GQ9BYG4 376 aaPredicted RBP2.91□□□□□ -1.94
VPS8-219ENST00000469479 RBKSQ9H477 322 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 DAZ3Q9NR90 486 aaKnown RBP2.91□□□□□ -1.94
VPS8-219ENST00000469479 PKIGQ9Y2B9 76 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 KIF25-AS1Q9Y6Z4 181 aa2.91□□□□□ -1.94
VPS8-219ENST00000469479 IGHV3-64A0A075B6Q5 118 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 A0A0B4J2A0 478 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 LOC100131303A0A0U1RQF7 123 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 LOC100506127A0A0U1RQW1 187 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 FNDC10F2Z333 226 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 K7EPK0 472 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 M0R2P5 195 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 PHOX2AO14813 284 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 MRPS12O15235 138 aaKnown RBP2.9□□□□□ -1.95
VPS8-219ENST00000469479 SDC2P34741 201 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 PKIAP61925 76 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 CNBPP62633 177 aaKnown RBP2.9□□□□□ -1.95
VPS8-219ENST00000469479 BTN1A1Q13410 526 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 PDE6HQ13956 83 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 FAM159AQ6UWV7 190 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 ZNF546Q86UE3 836 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 NIT1Q86X76 327 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 SELENOHQ8IZQ5 122 aaKnown RBP2.9□□□□□ -1.95
VPS8-219ENST00000469479 Q8N377 158 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 SLC25A29Q8N8R3 303 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 ARV1Q9H2C2 271 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 NAA60Q9H7X0 242 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 PLAC8Q9NZF1 115 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 SHPKQ9UHJ6 478 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 PAIP2BQ9ULR5 123 aaKnown RBP2.9□□□□□ -1.95
VPS8-219ENST00000469479 KCNIP3Q9Y2W7 256 aa2.9□□□□□ -1.95
VPS8-219ENST00000469479 DUXBA0A1W2PPF3 345 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 COX7A2P2O60397 106 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 CRPP02741 224 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 IGLC2P0DOY2 106 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 ANXA3P12429 323 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 FGF8P55075 233 aaPredicted RBP2.89□□□□□ -1.95
VPS8-219ENST00000469479 VBP1P61758 197 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 SPCS2Q15005 226 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 LINC00305Q7Z4B0 112 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 SAMD12Q8N8I0 201 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 CYB561D1Q8N8Q1 229 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 OR13C8Q8NGS7 320 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 LHFPL5Q8TAF8 219 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 SPACA4Q8TDM5 124 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 C15orf40Q8WUR7 153 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 UBE2WQ96B02 151 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 FUNDC2Q9BWH2 189 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 ARL6Q9H0F7 186 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 KLK12Q9UKR0 248 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
VPS8-219ENST00000469479 A0A087WZ39 114 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 SMCO3A2RU48 225 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 H7C1H1 209 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 SLC17A3O00476 420 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 GOSR2O14653 212 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 APOA1P02647 267 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 SLC25A6P12236 298 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 INPP1P49441 399 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 ZNF138P52744 262 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 CACNG7P62955 275 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 SRSF9Q13242 221 aaKnown RBP eCLIP2.88□□□□□ -1.95
VPS8-219ENST00000469479 ZNF266Q14584 549 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 PRR4Q16378 134 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 MIAQ16674 131 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 TMEM183BQ1AE95 376 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 SNX29P2Q8IUI4 249 aa2.88□□□□□ -1.95
VPS8-219ENST00000469479 TMEM183AQ8IXX5 376 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms