RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 UPK1BO75841 260 aa8.09□□□□□ -1.11
HDAC3-204ENST00000469207 TCRAP04437 139 aa8.09□□□□□ -1.11
HDAC3-204ENST00000469207 ARL14EPLP0DKL9 152 aa8.09□□□□□ -1.11
HDAC3-204ENST00000469207 PRNTQ86SH4 94 aa8.09□□□□□ -1.11
HDAC3-204ENST00000469207 LINC00479Q96M42 142 aa8.09□□□□□ -1.11
HDAC3-204ENST00000469207 SAMD10Q9BYL1 202 aa8.09□□□□□ -1.11
HDAC3-204ENST00000469207 IGKV3D-20A0A0C4DH25 116 aa8.08□□□□□ -1.12
HDAC3-204ENST00000469207 TAAR5O14804 337 aa8.08□□□□□ -1.12
HDAC3-204ENST00000469207 SSNA1O43805 119 aa8.08□□□□□ -1.12
HDAC3-204ENST00000469207 SUMO1P63165 101 aaKnown RBP8.08□□□□□ -1.12
HDAC3-204ENST00000469207 Q6ZSA8 131 aa8.08□□□□□ -1.12
HDAC3-204ENST00000469207 ARL6IP6Q8N6S5 226 aa8.08□□□□□ -1.12
HDAC3-204ENST00000469207 MARVELD1Q9BSK0 173 aa8.08□□□□□ -1.12
HDAC3-204ENST00000469207 TM2D2Q9BX73 214 aa8.08□□□□□ -1.12
HDAC3-204ENST00000469207 UBR4Q5T4S7 5183 aa8.08□□□□□ -1.12
HDAC3-204ENST00000469207 HMCN2Q8NDA2 5059 aa8.07□□□□□ -1.12
HDAC3-204ENST00000469207 C1QBP02746 253 aa8.07□□□□□ -1.12
HDAC3-204ENST00000469207 STAG3L2P0CL84 134 aa8.07□□□□□ -1.12
HDAC3-204ENST00000469207 STAG3L3P0CL85 134 aa8.07□□□□□ -1.12
HDAC3-204ENST00000469207 FLI1Q01543 452 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-204ENST00000469207 C14orf178Q8N769 122 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-204ENST00000469207 S100ZQ8WXG8 99 aa8.07□□□□□ -1.12
HDAC3-204ENST00000469207 RAB24Q969Q5 203 aa8.07□□□□□ -1.12
HDAC3-204ENST00000469207 NDFIP1Q9BT67 221 aa8.07□□□□□ -1.12
HDAC3-204ENST00000469207 PARLQ9H300 379 aa8.07□□□□□ -1.12
HDAC3-204ENST00000469207 TRAV34A0A0B4J273 112 aa8.06□□□□□ -1.12
HDAC3-204ENST00000469207 KRTAP29-1A8MX34 341 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-204ENST00000469207 CIDEAO60543 219 aa8.06□□□□□ -1.12
HDAC3-204ENST00000469207 PLA2G1BP04054 148 aaKnown RBP8.06□□□□□ -1.12
HDAC3-204ENST00000469207 LINC00694P0DN24 101 aa8.06□□□□□ -1.12
HDAC3-204ENST00000469207 MGST1P10620 155 aaKnown RBP8.06□□□□□ -1.12
HDAC3-204ENST00000469207 GCHFRP30047 84 aa8.06□□□□□ -1.12
HDAC3-204ENST00000469207 CDC34P49427 236 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-204ENST00000469207 LAGE3Q14657 143 aa8.06□□□□□ -1.12
HDAC3-204ENST00000469207 LGALSLQ3ZCW2 172 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-204ENST00000469207 SMUG1Q53HV7 270 aa8.06□□□□□ -1.12
HDAC3-204ENST00000469207 SCXQ7RTU7 201 aa8.06□□□□□ -1.12
HDAC3-204ENST00000469207 C5orf17Q8NAS9 161 aa8.06□□□□□ -1.12
HDAC3-204ENST00000469207 HSD17B11Q8NBQ5 300 aa8.06□□□□□ -1.12
HDAC3-204ENST00000469207 EPDR1Q9UM22 224 aa8.06□□□□□ -1.12
HDAC3-204ENST00000469207 GGTLC3B5MD39 225 aa8.05□□□□□ -1.12
HDAC3-204ENST00000469207 DMRTA1Q5VZB9 504 aa8.05□□□□□ -1.12
HDAC3-204ENST00000469207 UFSP1Q6NVU6 142 aa8.05□□□□□ -1.12
HDAC3-204ENST00000469207 SUN5Q8TC36 379 aa8.05□□□□□ -1.12
HDAC3-204ENST00000469207 PTH2Q96A98 100 aa8.05□□□□□ -1.12
HDAC3-204ENST00000469207 TRAV8-3A0A0A6YYJ7 113 aa8.04□□□□□ -1.12
HDAC3-204ENST00000469207 RBFOX3A6NFN3 312 aa8.04□□□□□ -1.12
HDAC3-204ENST00000469207 PET100P0DJ07 73 aa8.04□□□□□ -1.12
HDAC3-204ENST00000469207 KRTAP10-4P60372 401 aaPredicted RBP8.04□□□□□ -1.12
HDAC3-204ENST00000469207 LINC00299Q6ZSB3 139 aa8.04□□□□□ -1.12
HDAC3-204ENST00000469207 DEFB104AQ8WTQ1 72 aa8.04□□□□□ -1.12
HDAC3-204ENST00000469207 PKHD1L1Q86WI1 4243 aa8.03□□□□□ -1.12
HDAC3-204ENST00000469207 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
HDAC3-204ENST00000469207 SERTM2A0A1B0GWG4 89 aa8.03□□□□□ -1.12
HDAC3-204ENST00000469207 S100A4P26447 101 aaKnown RBP8.03□□□□□ -1.12
HDAC3-204ENST00000469207 ATP6V0CP27449 155 aa8.03□□□□□ -1.12
HDAC3-204ENST00000469207 CRIP1P50238 77 aa8.03□□□□□ -1.12
HDAC3-204ENST00000469207 ZFP2Q6ZN57 461 aa8.03□□□□□ -1.12
HDAC3-204ENST00000469207 CYB561D1Q8N8Q1 229 aa8.03□□□□□ -1.12
HDAC3-204ENST00000469207 SH3BGRL3Q9H299 93 aa8.03□□□□□ -1.12
HDAC3-204ENST00000469207 KLK12Q9UKR0 248 aa8.03□□□□□ -1.12
HDAC3-204ENST00000469207 BOLA1Q9Y3E2 137 aa8.03□□□□□ -1.12
HDAC3-204ENST00000469207 GRIFINA4D1Z8 144 aa8.02□□□□□ -1.13
HDAC3-204ENST00000469207 RNF222A6NCQ9 220 aa8.02□□□□□ -1.13
HDAC3-204ENST00000469207 A8MWV9 139 aa8.02□□□□□ -1.13
HDAC3-204ENST00000469207 K7EQM0 130 aa8.02□□□□□ -1.13
HDAC3-204ENST00000469207 ZFP69Q49AA0 526 aa8.02□□□□□ -1.13
HDAC3-204ENST00000469207 Q5BKY6 102 aa8.02□□□□□ -1.13
HDAC3-204ENST00000469207 ARL2-SNX15V9GYD0 113 aa8.02□□□□□ -1.13
HDAC3-204ENST00000469207 A0A087WWL8 130 aa8.01□□□□□ -1.13
HDAC3-204ENST00000469207 FABP5P3A8MUU1 101 aa8.01□□□□□ -1.13
HDAC3-204ENST00000469207 H3BVH4 76 aa8.01□□□□□ -1.13
HDAC3-204ENST00000469207 M0R036 132 aa8.01□□□□□ -1.13
HDAC3-204ENST00000469207 ARMS2P0C7Q2 107 aa8.01□□□□□ -1.13
HDAC3-204ENST00000469207 UBE2G2P60604 165 aa8.01□□□□□ -1.13
HDAC3-204ENST00000469207 SAPCD1Q5SSQ6 148 aa8.01□□□□□ -1.13
HDAC3-204ENST00000469207 FAM74A4Q5TZK3 123 aa8.01□□□□□ -1.13
HDAC3-204ENST00000469207 NIT1Q86X76 327 aa8.01□□□□□ -1.13
HDAC3-204ENST00000469207 OR2G3Q8NGZ4 309 aa8.01□□□□□ -1.13
HDAC3-204ENST00000469207 CIRBP-AS1Q8TBR5 109 aa8.01□□□□□ -1.13
HDAC3-204ENST00000469207 UBE2WQ96B02 151 aa8.01□□□□□ -1.13
HDAC3-204ENST00000469207 B4DEV8 164 aa8□□□□□ -1.13
HDAC3-204ENST00000469207 CXorf1O96002 111 aa8□□□□□ -1.13
HDAC3-204ENST00000469207 ASIPP42127 132 aa8□□□□□ -1.13
HDAC3-204ENST00000469207 ZNF726P1Q15940 193 aa8□□□□□ -1.13
HDAC3-204ENST00000469207 Q8N976 141 aa8□□□□□ -1.13
HDAC3-204ENST00000469207 CHAC1Q9BUX1 264 aa8□□□□□ -1.13
HDAC3-204ENST00000469207 TMSB15BA0A087X1C1 80 aa7.99□□□□□ -1.13
HDAC3-204ENST00000469207 KRBOX1C9JBD0 128 aa7.99□□□□□ -1.13
HDAC3-204ENST00000469207 IFNA7P01567 189 aa7.99□□□□□ -1.13
HDAC3-204ENST00000469207 FGF8P55075 233 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-204ENST00000469207 TOR2AQ5JU69 321 aa7.99□□□□□ -1.13
HDAC3-204ENST00000469207 ZC2HC1AQ96GY0 325 aa7.99□□□□□ -1.13
HDAC3-204ENST00000469207 PSMG3Q9BT73 122 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-204ENST00000469207 ACTR3CQ9C0K3 210 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-204ENST00000469207 TMEM167BQ9NRX6 74 aa7.99□□□□□ -1.13
HDAC3-204ENST00000469207 IL36BQ9NZH7 164 aa7.99□□□□□ -1.13
HDAC3-204ENST00000469207 ALG5Q9Y673 324 aa7.99□□□□□ -1.13
HDAC3-204ENST00000469207 URGCP-MRPS24S4R325 110 aa7.99□□□□□ -1.13
HDAC3-204ENST00000469207 A0A087WWC5 75 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms