RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 OR10G9Q8NGN4 311 aa8.15□□□□□ -1.1
COL5A1-207ENST00000469093 OR10G7Q8NGN6 311 aa8.15□□□□□ -1.1
COL5A1-207ENST00000469093 STOML3Q8TAV4 291 aa8.15□□□□□ -1.1
COL5A1-207ENST00000469093 CMTM2Q8TAZ6 248 aa8.15□□□□□ -1.1
COL5A1-207ENST00000469093 SH3BGRL3Q9H299 93 aa8.15□□□□□ -1.1
COL5A1-207ENST00000469093 TREM1Q9NP99 234 aa8.15□□□□□ -1.1
COL5A1-207ENST00000469093 RPH3ALQ9UNE2 315 aa8.15□□□□□ -1.1
COL5A1-207ENST00000469093 TRAV8-1A0A0A6YYK1 113 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 TRBV6-4A0A1B0GX49 114 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 FBLL1A6NHQ2 334 aaKnown RBP8.14□□□□□ -1.11
COL5A1-207ENST00000469093 F6UZH7 168 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 RS1O15537 224 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 IGHV3-30P01768 117 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 IGHV3-33P01772 117 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 SEC11BP0C7V7 166 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 IGHV3-30-3P0DP02 117 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 IGHV3-30-5P0DP03 117 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 RAB2AP61019 212 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 ZNF876PQ49A33 203 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 CFAP126Q5VTH2 177 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 DPPA3Q6W0C5 159 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 GOLT1AQ6ZVE7 132 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 ARL6IP6Q8N6S5 226 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 KCNS1Q96KK3 526 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 PRADC1Q9BSG0 188 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 ACTR3CQ9C0K3 210 aaPredicted RBP8.14□□□□□ -1.11
COL5A1-207ENST00000469093 SDF2L1Q9HCN8 221 aa8.14□□□□□ -1.11
COL5A1-207ENST00000469093 UMAD1C9J7I0 102 aa8.13□□□□□ -1.11
COL5A1-207ENST00000469093 CDC34P49427 236 aaPredicted RBP8.13□□□□□ -1.11
COL5A1-207ENST00000469093 WFDC2Q14508 124 aa8.13□□□□□ -1.11
COL5A1-207ENST00000469093 FAM74A1Q5RGS3 127 aa8.13□□□□□ -1.11
COL5A1-207ENST00000469093 LELP1Q5T871 98 aa8.13□□□□□ -1.11
COL5A1-207ENST00000469093 IGHV3-73A0A0B4J1V6 119 aa8.12□□□□□ -1.11
COL5A1-207ENST00000469093 CIDEAO60543 219 aa8.12□□□□□ -1.11
COL5A1-207ENST00000469093 Q6ZSA8 131 aa8.12□□□□□ -1.11
COL5A1-207ENST00000469093 ATP6V0E2Q8NHE4 81 aa8.12□□□□□ -1.11
COL5A1-207ENST00000469093 SGK494Q96LW2 274 aa8.12□□□□□ -1.11
COL5A1-207ENST00000469093 GTSF1LQ9H1H1 148 aa8.12□□□□□ -1.11
COL5A1-207ENST00000469093 C11orf21Q9P2W6 132 aa8.12□□□□□ -1.11
COL5A1-207ENST00000469093 KRTAP29-1A8MX34 341 aaPredicted RBP8.11□□□□□ -1.11
COL5A1-207ENST00000469093 PLA2G1BP04054 148 aaKnown RBP8.11□□□□□ -1.11
COL5A1-207ENST00000469093 RAB5CP51148 216 aa8.11□□□□□ -1.11
COL5A1-207ENST00000469093 ZNF80P51504 273 aaPredicted RBP8.11□□□□□ -1.11
COL5A1-207ENST00000469093 GNG5P63218 68 aa8.11□□□□□ -1.11
COL5A1-207ENST00000469093 LAGE3Q14657 143 aa8.11□□□□□ -1.11
COL5A1-207ENST00000469093 RHOHQ15669 191 aa8.11□□□□□ -1.11
COL5A1-207ENST00000469093 PQLC2Q6ZP29 291 aa8.11□□□□□ -1.11
COL5A1-207ENST00000469093 Q8N3U1 123 aa8.11□□□□□ -1.11
COL5A1-207ENST00000469093 TM2D2Q9BX73 214 aa8.11□□□□□ -1.11
COL5A1-207ENST00000469093 VPS13BQ7Z7G8 4022 aa8.11□□□□□ -1.11
COL5A1-207ENST00000469093 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
COL5A1-207ENST00000469093 CTXND1A0A1B0GTU2 59 aa8.1□□□□□ -1.11
COL5A1-207ENST00000469093 PGPEP1LA6NFU8 196 aa8.1□□□□□ -1.11
COL5A1-207ENST00000469093 TEX46H3BTG2 121 aa8.1□□□□□ -1.11
COL5A1-207ENST00000469093 HMGB3O15347 200 aaKnown RBP8.1□□□□□ -1.11
COL5A1-207ENST00000469093 FAM213BQ8TBF2 198 aa8.1□□□□□ -1.11
COL5A1-207ENST00000469093 PTH2Q96A98 100 aa8.1□□□□□ -1.11
COL5A1-207ENST00000469093 C9orf85Q96MD7 179 aa8.1□□□□□ -1.11
COL5A1-207ENST00000469093 CXorf1O96002 111 aa8.09□□□□□ -1.11
COL5A1-207ENST00000469093 MGST1P10620 155 aaKnown RBP8.09□□□□□ -1.11
COL5A1-207ENST00000469093 LINC00528Q8N1L1 170 aa8.09□□□□□ -1.11
COL5A1-207ENST00000469093 RAB24Q969Q5 203 aa8.09□□□□□ -1.11
COL5A1-207ENST00000469093 MAP1LC3B2A6NCE7 125 aa8.08□□□□□ -1.12
COL5A1-207ENST00000469093 LECT2O14960 151 aa8.08□□□□□ -1.12
COL5A1-207ENST00000469093 IGLV2-11P01706 119 aa8.08□□□□□ -1.12
COL5A1-207ENST00000469093 RNASE3P12724 160 aaKnown RBP8.08□□□□□ -1.12
COL5A1-207ENST00000469093 ZNF506Q5JVG8 444 aa8.08□□□□□ -1.12
COL5A1-207ENST00000469093 TMEM75Q8N9X5 138 aa8.08□□□□□ -1.12
COL5A1-207ENST00000469093 DEFB104AQ8WTQ1 72 aa8.08□□□□□ -1.12
COL5A1-207ENST00000469093 NDFIP1Q9BT67 221 aa8.08□□□□□ -1.12
COL5A1-207ENST00000469093 MAP1LC3BQ9GZQ8 125 aa8.08□□□□□ -1.12
COL5A1-207ENST00000469093 TRAV8-3A0A0A6YYJ7 113 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 SERTM2A0A1B0GWG4 89 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 GCGP01275 180 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 IFNA7P01567 189 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 TCRAP04437 139 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 H2AFB1P0C5Y9 115 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 ARL14EPLP0DKL9 152 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 SULT1A2P50226 295 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 ALKAL2Q6UX46 152 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 DAZ4Q86SG3 579 aaKnown RBP8.07□□□□□ -1.12
COL5A1-207ENST00000469093 SFT2D1Q8WV19 159 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 BAALCQ8WXS3 180 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 DAZ3Q9NR90 486 aaKnown RBP8.07□□□□□ -1.12
COL5A1-207ENST00000469093 TMEM167BQ9NRX6 74 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 Q9UF83 564 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 PSG8Q9UQ74 426 aa8.07□□□□□ -1.12
COL5A1-207ENST00000469093 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.06□□□□□ -1.12
COL5A1-207ENST00000469093 GAGE12JA6NER3 117 aa8.06□□□□□ -1.12
COL5A1-207ENST00000469093 STAG3L2P0CL84 134 aa8.06□□□□□ -1.12
COL5A1-207ENST00000469093 STAG3L3P0CL85 134 aa8.06□□□□□ -1.12
COL5A1-207ENST00000469093 LINC00694P0DN24 101 aa8.06□□□□□ -1.12
COL5A1-207ENST00000469093 GCHFRP30047 84 aa8.06□□□□□ -1.12
COL5A1-207ENST00000469093 BLOC1S1P78537 153 aa8.06□□□□□ -1.12
COL5A1-207ENST00000469093 GAGE1Q13065 139 aa8.06□□□□□ -1.12
COL5A1-207ENST00000469093 GAGE4Q13068 117 aa8.06□□□□□ -1.12
COL5A1-207ENST00000469093 GAGE5Q13069 117 aa8.06□□□□□ -1.12
COL5A1-207ENST00000469093 LINC01620Q4KN68 170 aa8.06□□□□□ -1.12
COL5A1-207ENST00000469093 GAGE13Q4V321 117 aa8.06□□□□□ -1.12
COL5A1-207ENST00000469093 C5orf17Q8NAS9 161 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms