RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 TMSB15BA0A087X1C1 80 aa9.34□□□□□ -0.91
SCAP-210ENST00000468965 RNASE3P12724 160 aaKnown RBP9.34□□□□□ -0.91
SCAP-210ENST00000468965 YPEL4Q96NS1 127 aa9.34□□□□□ -0.91
SCAP-210ENST00000468965 TIMM8BQ9Y5J9 83 aaPredicted RBP9.34□□□□□ -0.91
SCAP-210ENST00000468965 SMIM27A0A1W2PRY6 76 aa9.33□□□□□ -0.92
SCAP-210ENST00000468965 GRIFINA4D1Z8 144 aa9.33□□□□□ -0.92
SCAP-210ENST00000468965 A8MWL6 223 aa9.33□□□□□ -0.92
SCAP-210ENST00000468965 SNURFLB1AK76 121 aa9.33□□□□□ -0.92
SCAP-210ENST00000468965 RPS20P60866 119 aaKnown RBP9.33□□□□□ -0.92
SCAP-210ENST00000468965 DAZ2Q13117 558 aaKnown RBP9.33□□□□□ -0.92
SCAP-210ENST00000468965 ELOBQ15370 118 aa9.33□□□□□ -0.92
SCAP-210ENST00000468965 DNLZQ5SXM8 178 aa9.33□□□□□ -0.92
SCAP-210ENST00000468965 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.33□□□□□ -0.92
SCAP-210ENST00000468965 C9orf85Q96MD7 179 aa9.33□□□□□ -0.92
SCAP-210ENST00000468965 A0A1W2PPQ1 181 aa9.32□□□□□ -0.92
SCAP-210ENST00000468965 XKRY2A2RUG3 117 aa9.32□□□□□ -0.92
SCAP-210ENST00000468965 LYRM9A8MSI8 78 aa9.32□□□□□ -0.92
SCAP-210ENST00000468965 SPINK4O60575 86 aa9.32□□□□□ -0.92
SCAP-210ENST00000468965 SPART-AS1P0CW21 52 aa9.32□□□□□ -0.92
SCAP-210ENST00000468965 GZMBP10144 247 aa9.32□□□□□ -0.92
SCAP-210ENST00000468965 FAM3BP58499 235 aaPredicted RBP9.32□□□□□ -0.92
SCAP-210ENST00000468965 NANOS2P60321 138 aaKnown RBP9.32□□□□□ -0.92
SCAP-210ENST00000468965 LINC00612Q8N6U2 182 aa9.32□□□□□ -0.92
SCAP-210ENST00000468965 C11orf45Q8TAV5 145 aa9.32□□□□□ -0.92
SCAP-210ENST00000468965 GFRA4Q9GZZ7 299 aa9.32□□□□□ -0.92
SCAP-210ENST00000468965 NAT8BQ9UHF3 227 aa9.32□□□□□ -0.92
SCAP-210ENST00000468965 DYNC2H1Q8NCM8 4307 aaKnown RBP9.32□□□□□ -0.92
SCAP-210ENST00000468965 TRAV9-1A0A075B6T8 112 aa9.31□□□□□ -0.92
SCAP-210ENST00000468965 TGIF2-C20orf24A0A0A6YYL0 155 aa9.31□□□□□ -0.92
SCAP-210ENST00000468965 FAM231BA6NCW3 169 aa9.31□□□□□ -0.92
SCAP-210ENST00000468965 COLCA2A8K830 154 aa9.31□□□□□ -0.92
SCAP-210ENST00000468965 H3BVH4 76 aa9.31□□□□□ -0.92
SCAP-210ENST00000468965 CXCL1P09341 107 aa9.31□□□□□ -0.92
SCAP-210ENST00000468965 ASIPP42127 132 aa9.31□□□□□ -0.92
SCAP-210ENST00000468965 C12orf74Q32Q52 190 aa9.31□□□□□ -0.92
SCAP-210ENST00000468965 Q6ZTI0 123 aa9.31□□□□□ -0.92
SCAP-210ENST00000468965 GTSF1Q8WW33 167 aa9.31□□□□□ -0.92
SCAP-210ENST00000468965 SPXQ9BT56 116 aa9.31□□□□□ -0.92
SCAP-210ENST00000468965 MRPL16Q9NX20 251 aaKnown RBP9.31□□□□□ -0.92
SCAP-210ENST00000468965 TRBV24-1A0A075B6N3 115 aa9.3□□□□□ -0.92
SCAP-210ENST00000468965 TEX48A0A1B0GUV7 120 aa9.3□□□□□ -0.92
SCAP-210ENST00000468965 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
SCAP-210ENST00000468965 S100A4P26447 101 aaKnown RBP9.3□□□□□ -0.92
SCAP-210ENST00000468965 NUP35Q8NFH5 326 aa9.3□□□□□ -0.92
SCAP-210ENST00000468965 BTF3L4Q96K17 158 aa9.3□□□□□ -0.92
SCAP-210ENST00000468965 WWC2-AS2Q96NR7 200 aa9.3□□□□□ -0.92
SCAP-210ENST00000468965 TRGV1A0A0A0MS02 117 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 GAGE12BA1L429 117 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 M0R2P5 195 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 GAGE7O76087 117 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 ARMS2P0C7Q2 107 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 GAGE12FP0CL80 117 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 GAGE12GP0CL81 117 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 GAGE12IP0CL82 117 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 DEFB130BP0DP73 79 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 DEFB130AP0DP74 79 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 DAD1P61803 113 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 Q6ZTC4 211 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 FAM210BQ96KR6 192 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 SCRT2Q9NQ03 307 aa9.29□□□□□ -0.92
SCAP-210ENST00000468965 SNAI2O43623 268 aa9.28□□□□□ -0.92
SCAP-210ENST00000468965 IGLC6P0CF74 106 aa9.28□□□□□ -0.92
SCAP-210ENST00000468965 MED14OSP0DP75 135 aa9.28□□□□□ -0.92
SCAP-210ENST00000468965 CTRLP40313 264 aa9.28□□□□□ -0.92
SCAP-210ENST00000468965 FOXA3P55318 350 aaPredicted RBP9.28□□□□□ -0.92
SCAP-210ENST00000468965 LGALS9BQ3B8N2 356 aa9.28□□□□□ -0.92
SCAP-210ENST00000468965 FER1L6-AS1Q8NA97 138 aa9.28□□□□□ -0.92
SCAP-210ENST00000468965 RASL10AQ92737 203 aa9.28□□□□□ -0.92
SCAP-210ENST00000468965 PGLYRP4Q96LB8 373 aa9.28□□□□□ -0.92
SCAP-210ENST00000468965 TPPP3Q9BW30 176 aa9.28□□□□□ -0.92
SCAP-210ENST00000468965 RAB5AP20339 215 aa9.27□□□□□ -0.93
SCAP-210ENST00000468965 MRPL54Q6P161 138 aaKnown RBP9.27□□□□□ -0.93
SCAP-210ENST00000468965 PTH2Q96A98 100 aa9.27□□□□□ -0.93
SCAP-210ENST00000468965 SSBP4Q9BWG4 385 aaPredicted RBP9.27□□□□□ -0.93
SCAP-210ENST00000468965 STARD9Q9P2P6 4700 aa9.27□□□□□ -0.93
SCAP-210ENST00000468965 CSMD3Q7Z407 3707 aa9.26□□□□□ -0.93
SCAP-210ENST00000468965 OR5AL1P0C617 328 aa9.26□□□□□ -0.93
SCAP-210ENST00000468965 ZNF876PQ49A33 203 aa9.26□□□□□ -0.93
SCAP-210ENST00000468965 LYZL1Q6UWQ5 148 aa9.26□□□□□ -0.93
SCAP-210ENST00000468965 ATP5L2Q7Z4Y8 100 aa9.26□□□□□ -0.93
SCAP-210ENST00000468965 POM121L12Q8N7R1 296 aa9.26□□□□□ -0.93
SCAP-210ENST00000468965 OR10AG1Q8NH19 301 aa9.26□□□□□ -0.93
SCAP-210ENST00000468965 MUC7Q8TAX7 377 aa9.26□□□□□ -0.93
SCAP-210ENST00000468965 BORCS7Q96B45 105 aa9.26□□□□□ -0.93
SCAP-210ENST00000468965 C18orf15Q96N68 181 aa9.26□□□□□ -0.93
SCAP-210ENST00000468965 MUC21A0A0G2JKD1 596 aa9.25□□□□□ -0.93
SCAP-210ENST00000468965 MUC21A0A140T8X8 626 aa9.25□□□□□ -0.93
SCAP-210ENST00000468965 A0A1B0GUT8 65 aa9.25□□□□□ -0.93
SCAP-210ENST00000468965 DMRTA1Q5VZB9 504 aa9.25□□□□□ -0.93
SCAP-210ENST00000468965 PHLDA1Q8WV24 401 aaPredicted RBP9.25□□□□□ -0.93
SCAP-210ENST00000468965 PHLDA3Q9Y5J5 127 aa9.25□□□□□ -0.93
SCAP-210ENST00000468965 TRGV2A0A075B6R0 118 aa9.24□□□□□ -0.93
SCAP-210ENST00000468965 A0A1B0GXF2 115 aa9.24□□□□□ -0.93
SCAP-210ENST00000468965 F2Z2F3 143 aa9.24□□□□□ -0.93
SCAP-210ENST00000468965 NXPH4O95158 308 aa9.24□□□□□ -0.93
SCAP-210ENST00000468965 HBBP68871 147 aa9.24□□□□□ -0.93
SCAP-210ENST00000468965 RIGQ13278 110 aa9.24□□□□□ -0.93
SCAP-210ENST00000468965 RASL11AQ6T310 242 aa9.24□□□□□ -0.93
SCAP-210ENST00000468965 JPT2Q9H910 190 aa9.24□□□□□ -0.93
SCAP-210ENST00000468965 TRAV10A0A0B4J240 114 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms