RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 MRPS12O15235 138 aaKnown RBP3.72□□□□□ -1.81
SF3B1-207ENST00000468925 SH2D1AO60880 128 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 PATE4P0C8F1 98 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 CGB3P0DN86 165 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 CGB7P0DN87 165 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 Q1RN00 199 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 FAM222AQ5U5X8 452 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 ATP5EP2Q5VTU8 51 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 MORN5Q5VZ52 161 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 VKORC1L1Q8N0U8 176 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 VSIG2Q96IQ7 327 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 C2orf48Q96LS8 159 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 TIMM17AQ99595 171 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 SHANK2-AS3Q9BTD1 123 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 SMIM2Q9BVW6 85 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 PLA2G2FQ9BZM2 168 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 PRRC2BQ5JSZ5 2229 aaKnown RBP3.72□□□□□ -1.81
SF3B1-207ENST00000468925 WDR87Q6ZQQ6 2873 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 DNAH12Q6ZR08 3092 aa3.72□□□□□ -1.81
SF3B1-207ENST00000468925 C2orf16Q68DN1 1984 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 LMO7DNF2Z398 122 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 C5orf67F2Z3F1 127 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 H3BRN7 92 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 H7C423 109 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 J3QLI3 93 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 LEPROTO15243 131 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 CXCL13O43927 109 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 TIMM17BO60830 172 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 SAA1P0DJI8 122 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-207ENST00000468925 SAA2P0DJI9 122 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-207ENST00000468925 CD59P13987 128 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 WT1P19544 449 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-207ENST00000468925 EFNA4P52798 201 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 B3GALT5-AS1P59052 145 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 ERCC8Q13216 396 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 RPL39P5Q59GN2 51 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 GUSBP11Q6P575 273 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 ZNF833PQ6ZTB9 187 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 LINC00311Q8N616 119 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 FAM216BQ8N7L0 139 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 C9orf85Q96MD7 179 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 RNF5Q99942 180 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 TTTY13Q9BZ97 58 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 LTBP2Q14767 1821 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 TET2Q6N021 2002 aaPredicted RBP3.71□□□□□ -1.82
SF3B1-207ENST00000468925 ESPL1Q14674 2120 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 ZNF292O60281 2723 aa3.71□□□□□ -1.82
SF3B1-207ENST00000468925 SEC16AO15027 2179 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 CHD9Q3L8U1 2897 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 RTTNQ86VV8 2226 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 FASNP49327 2511 aaKnown RBP3.7□□□□□ -1.82
SF3B1-207ENST00000468925 IGHV1OR21-1A0A087WYE8 117 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 SMIM26A0A096LP01 95 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 IGHV3-43A0A0B4J1X8 118 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 hADV29S1A0JD25 119 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 TMEM223A0PJW6 202 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 DEFB108AA8MXU0 73 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 EPM2AB3EWF7 344 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 SRRM5B3KS81 715 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 J3QQQ9 107 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 M0R3E3 92 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 NDUFC1O43677 76 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 TIMM8AO60220 97 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-207ENST00000468925 IGHV3-43DP0DP04 118 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 CRIP1P50238 77 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 GFERP55789 205 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 C6orf226Q5I0X4 101 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 Q5XG85 94 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 Q6JHZ5 121 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 CD164L2Q6UWJ8 174 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 C16orf47Q6ZP98 133 aaPredicted RBP3.7□□□□□ -1.82
SF3B1-207ENST00000468925 WDR86Q86TI4 376 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 APRG1Q8IVJ8 170 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 NRACQ8N912 160 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 SAP25Q8TEE9 199 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 MRPL53Q96EL3 112 aaKnown RBP3.7□□□□□ -1.82
SF3B1-207ENST00000468925 RPUSD1Q9UJJ7 312 aaKnown RBP3.7□□□□□ -1.82
SF3B1-207ENST00000468925 PYGO1Q9Y3Y4 419 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 LENEPQ9Y5L5 61 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 ICOSQ9Y6W8 199 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 NCOR2Q9Y618 2525 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 ZNF407Q9C0G0 2248 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 ABCA7Q8IZY2 2146 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 TET1Q8NFU7 2136 aa3.7□□□□□ -1.82
SF3B1-207ENST00000468925 TPRP12270 2363 aaKnown RBP3.69□□□□□ -1.82
SF3B1-207ENST00000468925 DIDO1Q9BTC0 2240 aaKnown RBP3.69□□□□□ -1.82
SF3B1-207ENST00000468925 TRGV5A0A0B4J1U4 118 aa3.69□□□□□ -1.82
SF3B1-207ENST00000468925 TRBV10-3A0A0K0K1G6 114 aa3.69□□□□□ -1.82
SF3B1-207ENST00000468925 IGHV1-69P01742 117 aa3.69□□□□□ -1.82
SF3B1-207ENST00000468925 IGHV3-13P01766 116 aa3.69□□□□□ -1.82
SF3B1-207ENST00000468925 IGHG2P01859 326 aa3.69□□□□□ -1.82
SF3B1-207ENST00000468925 EGR2P11161 476 aaPredicted RBP3.69□□□□□ -1.82
SF3B1-207ENST00000468925 PFN2P35080 140 aa3.69□□□□□ -1.82
SF3B1-207ENST00000468925 SYNJ2BPP57105 145 aa3.69□□□□□ -1.82
SF3B1-207ENST00000468925 C2orf66Q6UXQ4 117 aa3.69□□□□□ -1.82
SF3B1-207ENST00000468925 ASCL5Q7RTU5 278 aa3.69□□□□□ -1.82
SF3B1-207ENST00000468925 DCANP1Q8TF63 244 aa3.69□□□□□ -1.82
SF3B1-207ENST00000468925 DPH3P1Q9H4G8 78 aa3.69□□□□□ -1.82
SF3B1-207ENST00000468925 FLNBO75369 2602 aaKnown RBP3.69□□□□□ -1.82
SF3B1-207ENST00000468925 ZFHX2Q9C0A1 2572 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms