RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 AMTNQ6UX39 209 aa5.67□□□□□ -1.5
COL6A3-208ENST00000468792 Q8N8P6 123 aa5.67□□□□□ -1.5
COL6A3-208ENST00000468792 NRACQ8N912 160 aa5.67□□□□□ -1.5
COL6A3-208ENST00000468792 OR2K2Q8NGT1 345 aa5.67□□□□□ -1.5
COL6A3-208ENST00000468792 ZNF418Q8TF45 676 aaPredicted RBP5.67□□□□□ -1.5
COL6A3-208ENST00000468792 SPAG8Q99932 426 aaPredicted RBP5.67□□□□□ -1.5
COL6A3-208ENST00000468792 LINC00467Q9BRT7 94 aa5.67□□□□□ -1.5
COL6A3-208ENST00000468792 DPH3P1Q9H4G8 78 aa5.67□□□□□ -1.5
COL6A3-208ENST00000468792 YAE1D1Q9NRH1 226 aa5.67□□□□□ -1.5
COL6A3-208ENST00000468792 PHLDA3Q9Y5J5 127 aa5.67□□□□□ -1.5
COL6A3-208ENST00000468792 IGKV3-7A0A075B6H7 116 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 LINC01549A6NIU2 74 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 HLA-DRB4P13762 266 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 SRD5A1P18405 259 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 FCER1GP30273 86 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 SLURP1P55000 103 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 CMC4P56277 68 aaPredicted RBP5.66□□□□□ -1.5
COL6A3-208ENST00000468792 KIR3DS1Q14943 382 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 DEFB114Q30KQ6 69 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 LGALS9BQ3B8N2 356 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 LGALS9CQ6DKI2 356 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 HIST2H2BCQ6DN03 193 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 WFDC3Q8IUB2 231 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 KLHL30-AS1Q8NEE0 82 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 DLX4Q92988 240 aaPredicted RBP5.66□□□□□ -1.5
COL6A3-208ENST00000468792 PTH2Q96A98 100 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 C9orf85Q96MD7 179 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 AP1S3Q96PC3 154 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 ST20Q9HBF5 79 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 UQCR10Q9UDW1 63 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 TSSC4Q9Y5U2 329 aaPredicted RBP5.66□□□□□ -1.5
COL6A3-208ENST00000468792 HLA-DRB4X5D2U9 266 aa5.66□□□□□ -1.5
COL6A3-208ENST00000468792 SONP18583 2426 aaKnown RBP5.66□□□□□ -1.5
COL6A3-208ENST00000468792 IGHV1OR15-1A0A075B7D0 117 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 IGHV3-16A0A0C4DH30 117 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 MUC21A0A0G2JKD1 596 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 MUC21A0A140T8X8 626 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 OR4C46A6NHA9 309 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 H3BMM0 161 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 IGLC3P0DOY3 106 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 DEFB1P60022 68 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 SPATA45Q537H7 98 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 MUC21Q5SSG8 566 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 Q6ZQT7 251 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 C18orf65Q6ZTR6 163 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 LINC01006Q8NI28 216 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 DUX5Q96PT3 197 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 FAM110AQ9BQ89 295 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 C2orf88Q9BSF0 95 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 PAM16Q9Y3D7 125 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 KIF25-AS1Q9Y6Z4 181 aa5.65□□□□□ -1.5
COL6A3-208ENST00000468792 TRGV11A0A075B6L2 103 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 LOC389332A0A1B0GUA5 103 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 SMKR1H3BMG3 65 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 CCL24O00175 119 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 GNRH2O43555 120 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 G0S2P27469 103 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 LINC00315P59091 139 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 DEFB136Q30KP8 78 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 PRR31Q5SQ13 230 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 ZNF705AQ6ZN79 300 aaPredicted RBP5.64□□□□□ -1.51
COL6A3-208ENST00000468792 LURAP1LQ8IV03 231 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 TMEM61Q8N0U2 210 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 SYT8Q8NBV8 401 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 RAX2Q96IS3 184 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 MDFIQ99750 246 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 EDA2RQ9HAV5 297 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 ZNF256Q9Y2P7 627 aaPredicted RBP5.64□□□□□ -1.51
COL6A3-208ENST00000468792 ACANP16112 2415 aa5.64□□□□□ -1.51
COL6A3-208ENST00000468792 TRAV12-3A0A0B4J271 114 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 TRBV6-5A0A0K0K1A5 114 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 HSBP1L1C9JCN9 74 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 M0R143 59 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 ATP5LO75964 103 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 NCR2O95944 276 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 FOSL1P15407 271 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 IGLL1P15814 213 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 TFPI2P48307 235 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 SSTP61278 116 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 SUMO2P61956 95 aaKnown RBP5.63□□□□□ -1.51
COL6A3-208ENST00000468792 LAGE3Q14657 143 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 ORMDL2Q53FV1 153 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 LINC00173Q6ZV60 143 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 DYNLRB2Q8TF09 96 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 IFI27L1Q96BM0 104 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 SMIM2Q9BVW6 85 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 MRPS16Q9Y3D3 137 aaKnown RBP5.63□□□□□ -1.51
COL6A3-208ENST00000468792 OTOGQ6ZRI0 2925 aa5.63□□□□□ -1.51
COL6A3-208ENST00000468792 HIVEP2P31629 2446 aa5.62□□□□□ -1.51
COL6A3-208ENST00000468792 FASNP49327 2511 aaKnown RBP5.62□□□□□ -1.51
COL6A3-208ENST00000468792 J3KRW8 73 aa5.62□□□□□ -1.51
COL6A3-208ENST00000468792 GAS8-AS1O95177 125 aa5.62□□□□□ -1.51
COL6A3-208ENST00000468792 CD7P09564 240 aa5.62□□□□□ -1.51
COL6A3-208ENST00000468792 SMIM17P0DL12 118 aa5.62□□□□□ -1.51
COL6A3-208ENST00000468792 CD28P10747 220 aa5.62□□□□□ -1.51
COL6A3-208ENST00000468792 PROK1P58294 105 aa5.62□□□□□ -1.51
COL6A3-208ENST00000468792 DEFB131AP59861 70 aa5.62□□□□□ -1.51
COL6A3-208ENST00000468792 Q8N1Y9 231 aa5.62□□□□□ -1.51
COL6A3-208ENST00000468792 C14orf178Q8N769 122 aaPredicted RBP5.62□□□□□ -1.51
COL6A3-208ENST00000468792 RASL10AQ92737 203 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms