RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 SEC11AP67812 179 aa2.33□□□□□ -2.04
CDHR3-206ENST00000468477 CCL8P80075 99 aa2.33□□□□□ -2.04
CDHR3-206ENST00000468477 ZNF345Q14585 488 aa2.33□□□□□ -2.04
CDHR3-206ENST00000468477 TMEM136Q6ZRR5 245 aa2.33□□□□□ -2.04
CDHR3-206ENST00000468477 LYPD6Q86Y78 171 aa2.33□□□□□ -2.04
CDHR3-206ENST00000468477 OR10AG1Q8NH19 301 aa2.33□□□□□ -2.04
CDHR3-206ENST00000468477 KLF14Q8TD94 323 aaPredicted RBP2.33□□□□□ -2.04
CDHR3-206ENST00000468477 C20orf166-AS1Q96NR2 134 aa2.33□□□□□ -2.04
CDHR3-206ENST00000468477 COL24A1Q17RW2 1714 aa2.33□□□□□ -2.04
CDHR3-206ENST00000468477 SDK2Q58EX2 2172 aa2.33□□□□□ -2.04
CDHR3-206ENST00000468477 PATJQ8NI35 1801 aa2.33□□□□□ -2.04
CDHR3-206ENST00000468477 SHANK2Q9UPX8 1470 aa2.33□□□□□ -2.04
CDHR3-206ENST00000468477 EXPH5Q8NEV8 1989 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 SHROOM2Q13796 1616 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 MAP3K4Q9Y6R4 1608 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 KIF21AQ7Z4S6 1674 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 IGLV4-69A0A075B6H9 119 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 IGKV3D-15A0A087WSY6 115 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 NAP1L6A6NFF2 107 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 CRYM-AS1A6NIL9 109 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 HMSDA8MTL9 139 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 CFDP00746 253 aaPredicted RBP2.32□□□□□ -2.04
CDHR3-206ENST00000468477 DSCR4P56555 118 aaPredicted RBP2.32□□□□□ -2.04
CDHR3-206ENST00000468477 EIF4EBP1Q13541 118 aaPredicted RBP2.32□□□□□ -2.04
CDHR3-206ENST00000468477 Q1T7F1 81 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 C14orf177Q52M58 125 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 SLC48A1Q6P1K1 146 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 ZNF826PQ6ZT77 177 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 TMEM254Q8TBM7 123 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 MYOZ3Q8TDC0 251 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 MRPL35Q9NZE8 188 aaKnown RBP2.32□□□□□ -2.04
CDHR3-206ENST00000468477 COL11A1P12107 1806 aaPredicted RBP2.32□□□□□ -2.04
CDHR3-206ENST00000468477 KIAA1549LQ6ZVL6 1849 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 HFM1A2PYH4 1435 aa2.32□□□□□ -2.04
CDHR3-206ENST00000468477 TMEM131LA2VDJ0 1609 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 LRP5O75197 1615 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 CLTCQ00610 1675 aaKnown RBP2.31□□□□□ -2.04
CDHR3-206ENST00000468477 MYO5CQ9NQX4 1742 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 MUC22E2RYF6 1773 aaPredicted RBP2.31□□□□□ -2.04
CDHR3-206ENST00000468477 TUBGCP6Q96RT7 1819 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 ARHGAP32A7KAX9 2087 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 NINQ8N4C6 2090 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 IGHV3-64A0A075B6Q5 118 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 A0A0J9YX75 114 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 A0A1W2PPM0 123 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 PCNX2A6NKB5 2137 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 E7EUB6 86 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 CISD3P0C7P0 127 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 BAALC-AS2P0C853 105 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 IGLC2P0DOY2 106 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 IGLC3P0DOY3 106 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 RNASE2P10153 161 aaKnown RBP2.31□□□□□ -2.04
CDHR3-206ENST00000468477 KRTAP25-1Q3LHN0 102 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 ZCCHC23Q6ZST2 131 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 SPTSSBQ8NFR3 76 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 OR8B3Q8NGG8 313 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 CMTM2Q8TAZ6 248 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 AMELYQ99218 206 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 CYTL1Q9NRR1 136 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 LINC00474Q9P2X8 69 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 CACFD1Q9UGQ2 172 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 PLXNA1Q9UIW2 1896 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 MYO16Q9Y6X6 1858 aa2.31□□□□□ -2.04
CDHR3-206ENST00000468477 IGLV10-54A0A075B6I4 117 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 TRAV2A0A0B4J234 112 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 TRAV10A0A0B4J240 114 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 ERC2-IT1O76042 136 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 KRTAP10-5P60370 271 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 GNGT1P63211 74 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 HMGN3Q15651 99 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 DEFB113Q30KQ7 82 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 ETDBQ3ZM63 59 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 BVES-AS1Q5T3Y7 98 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 SERP2Q8N6R1 65 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 ZNF431Q8TF32 576 aaPredicted RBP2.3□□□□□ -2.04
CDHR3-206ENST00000468477 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 ANKARQ7Z5J8 1434 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 CDK12Q9NYV4 1490 aaPredicted RBP2.3□□□□□ -2.04
CDHR3-206ENST00000468477 DISP1Q96F81 1524 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 NWD2Q9ULI1 1742 aa2.3□□□□□ -2.04
CDHR3-206ENST00000468477 LAMB1P07942 1786 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 ABCA8O94911 1581 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 MEGF6O75095 1541 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 EDC4Q6P2E9 1401 aaKnown RBP2.29□□□□□ -2.04
CDHR3-206ENST00000468477 A0A087WSZ3 146 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 TRAV13-2A0A0B4J235 113 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 TRBV10-3A0A0K0K1G6 114 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 SYS1-DBNDD2H3BUS1 97 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 ASAH2BP0C7U1 165 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 MIFP14174 115 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 MIR22HGQ0VDD5 57 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 C9orf116Q5BN46 136 aaPredicted RBP2.29□□□□□ -2.04
CDHR3-206ENST00000468477 LINC00612Q8N6U2 182 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 TRGV9Q99603 122 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 NXT2Q9NPJ8 142 aaKnown RBP2.29□□□□□ -2.04
CDHR3-206ENST00000468477 PRR14LQ5THK1 2151 aa2.29□□□□□ -2.04
CDHR3-206ENST00000468477 MYO3AQ8NEV4 1616 aa2.28□□□□□ -2.04
CDHR3-206ENST00000468477 PTPN23Q9H3S7 1636 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms