RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 ASIPP42127 132 aa3.98□□□□□ -1.77
RIF1-209ENST00000467762 ERCC8Q13216 396 aa3.98□□□□□ -1.77
RIF1-209ENST00000467762 POM121L12Q8N7R1 296 aa3.98□□□□□ -1.77
RIF1-209ENST00000467762 NRACQ8N912 160 aa3.98□□□□□ -1.77
RIF1-209ENST00000467762 Q8TAT8 98 aa3.98□□□□□ -1.77
RIF1-209ENST00000467762 ITLN2Q8WWU7 325 aaPredicted RBP3.98□□□□□ -1.77
RIF1-209ENST00000467762 ODF3Q96PU9 254 aa3.98□□□□□ -1.77
RIF1-209ENST00000467762 CST9LQ9H4G1 147 aa3.98□□□□□ -1.77
RIF1-209ENST00000467762 DPH3P1Q9H4G8 78 aa3.98□□□□□ -1.77
RIF1-209ENST00000467762 TSSC4Q9Y5U2 329 aaPredicted RBP3.98□□□□□ -1.77
RIF1-209ENST00000467762 S4R3C0 116 aa3.98□□□□□ -1.77
RIF1-209ENST00000467762 IGHV7-4-1A0A0J9YVY3 117 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 PRAC2D3DTV9 90 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 K7EP34 96 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 LY6HO94772 140 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 NMUP48645 174 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 RBX1P62877 108 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 LOXL1Q08397 574 aaPredicted RBP3.97□□□□□ -1.77
RIF1-209ENST00000467762 FAM106AQ4KMX7 169 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 OCIAD2Q56VL3 154 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 PIK3CD-AS1Q5SR53 167 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 UFSP1Q6NVU6 142 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 TMEM158Q8WZ71 300 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 TOMM6Q96B49 74 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 FAM19A4Q96LR4 140 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 SMIM2Q9BVW6 85 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 DKK2Q9UBU2 259 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 HHLA3Q9XRX5 114 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 V9GYY9 64 aa3.97□□□□□ -1.77
RIF1-209ENST00000467762 IGHV4OR15-8A0A075B7B6 117 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 A0A087WW49 117 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 A0A1W2PPM0 123 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 A6NDX4 124 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 GAGE12JA6NER3 117 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 F8VRH5 84 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 G3V318 75 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 SMKR1H3BMG3 65 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 NXPH4O95158 308 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 S100A4P26447 101 aaKnown RBP3.96□□□□□ -1.78
RIF1-209ENST00000467762 HLA-DMBP28068 263 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 GPHB5Q86YW7 130 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 CEND1Q8N111 149 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 TMEM141Q96I45 108 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 BBC3Q96PG8 261 aaPredicted RBP3.96□□□□□ -1.78
RIF1-209ENST00000467762 FOXC2Q99958 501 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 BPESC1Q9GZL8 116 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 PRORYQ9H606 182 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 MSRB1Q9NZV6 116 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 UFC1Q9Y3C8 167 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 PHLDA3Q9Y5J5 127 aa3.96□□□□□ -1.78
RIF1-209ENST00000467762 CNOT1A5YKK6 2376 aaKnown RBP3.95□□□□□ -1.78
RIF1-209ENST00000467762 TRBV25-1A0A075B6N4 114 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 TRAV8-6A0A0B4J262 113 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 F8W1H4 67 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 J3QR89 54 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 SOCS3O14543 225 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 GATA1P15976 413 aaPredicted RBP3.95□□□□□ -1.78
RIF1-209ENST00000467762 GNLYP22749 145 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 HERVK_113P61574 105 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 ZC2HC1BQ5TFG8 222 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 RNF182Q8N6D2 247 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 DLX4Q92988 240 aaPredicted RBP3.95□□□□□ -1.78
RIF1-209ENST00000467762 SCGB3A1Q96QR1 104 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 CHAC1Q9BUX1 264 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 DAZ1Q9NQZ3 744 aaKnown RBP3.95□□□□□ -1.78
RIF1-209ENST00000467762 C11orf21Q9P2W6 132 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 COL6A3P12111 3177 aa3.95□□□□□ -1.78
RIF1-209ENST00000467762 DSPP15924 2871 aaKnown RBP3.95□□□□□ -1.78
RIF1-209ENST00000467762 BSNQ9UPA5 3926 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 EP300Q09472 2414 aaPredicted RBP3.94□□□□□ -1.78
RIF1-209ENST00000467762 PCNX1Q96RV3 2341 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 PRRC2CQ9Y520 2896 aaKnown RBP3.94□□□□□ -1.78
RIF1-209ENST00000467762 KLLNB2CW77 178 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 OR11H12B2RN74 326 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 B4DSR2 109 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 E9PLD3 99 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 H3BUT2 72 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 J3QLI3 93 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 DUSP14O95147 198 aaKnown RBP3.94□□□□□ -1.78
RIF1-209ENST00000467762 FHL2Q14192 279 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 LYRM7Q5U5X0 104 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 NEGR1Q7Z3B1 354 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 PCP2Q8IVA1 136 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 ZFAND2AQ8N6M9 145 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 NEXN-AS1Q8NBZ9 246 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 OR11H1Q8NG94 326 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 OR11H2Q8NH07 326 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 C10orf105Q8TEF2 133 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 C18orf15Q96N68 181 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 TIMM17AQ99595 171 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 VPS25Q9BRG1 176 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 MAP6D1Q9H9H5 199 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 MRPL35Q9NZE8 188 aaKnown RBP3.94□□□□□ -1.78
RIF1-209ENST00000467762 CYSLTR1Q9Y271 337 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 SPCS1Q9Y6A9 102 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 PKDREJQ9NTG1 2253 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 CELSR3Q9NYQ7 3312 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 ACACAQ13085 2346 aa3.94□□□□□ -1.78
RIF1-209ENST00000467762 WDFY4Q6ZS81 3184 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms