RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 TRAV4A0A0B4J268 109 aa9.72□□□□□ -0.85
CCHCR1-211ENST00000467553 TRBV6-1A0A0K0K1D8 114 aa9.72□□□□□ -0.85
CCHCR1-211ENST00000467553 A0A1W2PPQ1 181 aa9.72□□□□□ -0.85
CCHCR1-211ENST00000467553 B4DEV8 164 aa9.72□□□□□ -0.85
CCHCR1-211ENST00000467553 ZNF876PQ49A33 203 aa9.72□□□□□ -0.85
CCHCR1-211ENST00000467553 C9orf62Q8N4C0 152 aa9.72□□□□□ -0.85
CCHCR1-211ENST00000467553 NHLRC2Q8NBF2 726 aa9.72□□□□□ -0.85
CCHCR1-211ENST00000467553 UPK3BQ9BT76 320 aa9.72□□□□□ -0.85
CCHCR1-211ENST00000467553 Q9H8V8 135 aa9.72□□□□□ -0.85
CCHCR1-211ENST00000467553 ICOSQ9Y6W8 199 aa9.72□□□□□ -0.85
CCHCR1-211ENST00000467553 TRAV1-1A0A0B4J248 108 aa9.71□□□□□ -0.86
CCHCR1-211ENST00000467553 PGPEP1LA6NFU8 196 aa9.71□□□□□ -0.86
CCHCR1-211ENST00000467553 M0R036 132 aa9.71□□□□□ -0.86
CCHCR1-211ENST00000467553 SH2D1AO60880 128 aa9.71□□□□□ -0.86
CCHCR1-211ENST00000467553 CDK2AP2O75956 126 aa9.71□□□□□ -0.86
CCHCR1-211ENST00000467553 LTAP01374 205 aa9.71□□□□□ -0.86
CCHCR1-211ENST00000467553 S100A9P06702 114 aaKnown RBP9.71□□□□□ -0.86
CCHCR1-211ENST00000467553 FAM162BQ5T6X4 162 aa9.71□□□□□ -0.86
CCHCR1-211ENST00000467553 C9orf85Q96MD7 179 aa9.71□□□□□ -0.86
CCHCR1-211ENST00000467553 MANBALQ9NQG1 85 aa9.71□□□□□ -0.86
CCHCR1-211ENST00000467553 GRIFINA4D1Z8 144 aa9.7□□□□□ -0.86
CCHCR1-211ENST00000467553 C16orf90A8MZG2 172 aa9.7□□□□□ -0.86
CCHCR1-211ENST00000467553 RNASE3P12724 160 aaKnown RBP9.7□□□□□ -0.86
CCHCR1-211ENST00000467553 ASIPP42127 132 aa9.7□□□□□ -0.86
CCHCR1-211ENST00000467553 TNP2Q05952 138 aa9.7□□□□□ -0.86
CCHCR1-211ENST00000467553 MRPL23Q16540 153 aaKnown RBP9.7□□□□□ -0.86
CCHCR1-211ENST00000467553 COX8CQ7Z4L0 72 aa9.7□□□□□ -0.86
CCHCR1-211ENST00000467553 ZNF575Q86XF7 245 aa9.7□□□□□ -0.86
CCHCR1-211ENST00000467553 BAGE2Q86Y30 109 aa9.7□□□□□ -0.86
CCHCR1-211ENST00000467553 TMSB15BA0A087X1C1 80 aa9.69□□□□□ -0.86
CCHCR1-211ENST00000467553 KRBOX1C9JBD0 128 aa9.69□□□□□ -0.86
CCHCR1-211ENST00000467553 GYPEP15421 78 aa9.69□□□□□ -0.86
CCHCR1-211ENST00000467553 ZNF674Q2M3X9 581 aa9.69□□□□□ -0.86
CCHCR1-211ENST00000467553 ZNF506Q5JVG8 444 aa9.69□□□□□ -0.86
CCHCR1-211ENST00000467553 IGHV3-73A0A0B4J1V6 119 aa9.68□□□□□ -0.86
CCHCR1-211ENST00000467553 RS1O15537 224 aa9.68□□□□□ -0.86
CCHCR1-211ENST00000467553 NKX2-5P52952 324 aaPredicted RBP9.68□□□□□ -0.86
CCHCR1-211ENST00000467553 CFAP126Q5VTH2 177 aa9.68□□□□□ -0.86
CCHCR1-211ENST00000467553 PCNPQ8WW12 178 aaKnown RBP9.68□□□□□ -0.86
CCHCR1-211ENST00000467553 MRPS16Q9Y3D3 137 aaKnown RBP9.68□□□□□ -0.86
CCHCR1-211ENST00000467553 H3BVH4 76 aa9.67□□□□□ -0.86
CCHCR1-211ENST00000467553 K7EQD1 137 aa9.67□□□□□ -0.86
CCHCR1-211ENST00000467553 IFNA1P01562 189 aa9.67□□□□□ -0.86
CCHCR1-211ENST00000467553 ARMS2P0C7Q2 107 aa9.67□□□□□ -0.86
CCHCR1-211ENST00000467553 RPL35P42766 123 aaKnown RBP9.67□□□□□ -0.86
CCHCR1-211ENST00000467553 ALKAL2Q6UX46 152 aa9.67□□□□□ -0.86
CCHCR1-211ENST00000467553 PTH2Q96A98 100 aa9.67□□□□□ -0.86
CCHCR1-211ENST00000467553 IL36BQ9NZH7 164 aa9.67□□□□□ -0.86
CCHCR1-211ENST00000467553 LOC100131303A0A0U1RQF7 123 aa9.66□□□□□ -0.86
CCHCR1-211ENST00000467553 GATA1P15976 413 aaPredicted RBP9.66□□□□□ -0.86
CCHCR1-211ENST00000467553 SRIP30626 198 aa9.66□□□□□ -0.86
CCHCR1-211ENST00000467553 PRR27Q6MZM9 219 aa9.66□□□□□ -0.86
CCHCR1-211ENST00000467553 LYPD5Q6UWN5 251 aa9.66□□□□□ -0.86
CCHCR1-211ENST00000467553 NEGR1Q7Z3B1 354 aa9.66□□□□□ -0.86
CCHCR1-211ENST00000467553 TXNDC17Q9BRA2 123 aa9.66□□□□□ -0.86
CCHCR1-211ENST00000467553 DERL1Q9BUN8 251 aa9.66□□□□□ -0.86
CCHCR1-211ENST00000467553 BOLA1Q9Y3E2 137 aa9.66□□□□□ -0.86
CCHCR1-211ENST00000467553 ABCA13Q86UQ4 5058 aa9.65□□□□□ -0.86
CCHCR1-211ENST00000467553 CIDEAO60543 219 aa9.65□□□□□ -0.86
CCHCR1-211ENST00000467553 MEF2BQ02080 365 aaPredicted RBP9.65□□□□□ -0.86
CCHCR1-211ENST00000467553 LINC01559Q495D7 138 aa9.65□□□□□ -0.86
CCHCR1-211ENST00000467553 DNLZQ5SXM8 178 aa9.65□□□□□ -0.86
CCHCR1-211ENST00000467553 DMRTA1Q5VZB9 504 aa9.65□□□□□ -0.86
CCHCR1-211ENST00000467553 SLC25A29Q8N8R3 303 aa9.65□□□□□ -0.86
CCHCR1-211ENST00000467553 MLST8Q9BVC4 326 aa9.65□□□□□ -0.86
CCHCR1-211ENST00000467553 MED9Q9NWA0 146 aa9.65□□□□□ -0.86
CCHCR1-211ENST00000467553 DNAH5Q8TE73 4624 aa9.65□□□□□ -0.86
CCHCR1-211ENST00000467553 RAB19A4D1S5 217 aa9.64□□□□□ -0.87
CCHCR1-211ENST00000467553 A8MWV9 139 aa9.64□□□□□ -0.87
CCHCR1-211ENST00000467553 BLOC1S1P78537 153 aa9.64□□□□□ -0.87
CCHCR1-211ENST00000467553 RPL19P84098 196 aaKnown RBP9.64□□□□□ -0.87
CCHCR1-211ENST00000467553 SYT8Q8NBV8 401 aa9.64□□□□□ -0.87
CCHCR1-211ENST00000467553 C11orf52Q96A22 123 aa9.64□□□□□ -0.87
CCHCR1-211ENST00000467553 PRADC1Q9BSG0 188 aa9.64□□□□□ -0.87
CCHCR1-211ENST00000467553 JPT2Q9H910 190 aa9.64□□□□□ -0.87
CCHCR1-211ENST00000467553 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
CCHCR1-211ENST00000467553 PHLDA3Q9Y5J5 127 aa9.64□□□□□ -0.87
CCHCR1-211ENST00000467553 APOBP04114 4563 aaKnown RBP9.63□□□□□ -0.87
CCHCR1-211ENST00000467553 SIVA1O15304 175 aa9.63□□□□□ -0.87
CCHCR1-211ENST00000467553 PDE6DO43924 150 aa9.63□□□□□ -0.87
CCHCR1-211ENST00000467553 NXPH4O95158 308 aa9.63□□□□□ -0.87
CCHCR1-211ENST00000467553 BCL2P10415 239 aa9.63□□□□□ -0.87
CCHCR1-211ENST00000467553 MGST1P10620 155 aaKnown RBP9.63□□□□□ -0.87
CCHCR1-211ENST00000467553 TRBV6-4A0A1B0GX49 114 aa9.62□□□□□ -0.87
CCHCR1-211ENST00000467553 M0R381 172 aa9.62□□□□□ -0.87
CCHCR1-211ENST00000467553 RHOHQ15669 191 aa9.62□□□□□ -0.87
CCHCR1-211ENST00000467553 CENPWQ5EE01 88 aa9.62□□□□□ -0.87
CCHCR1-211ENST00000467553 PIK3CD-AS1Q5SR53 167 aa9.62□□□□□ -0.87
CCHCR1-211ENST00000467553 SPATA12Q7Z6I5 190 aa9.62□□□□□ -0.87
CCHCR1-211ENST00000467553 SAMD10Q9BYL1 202 aa9.62□□□□□ -0.87
CCHCR1-211ENST00000467553 PARLQ9H300 379 aa9.62□□□□□ -0.87
CCHCR1-211ENST00000467553 TAGLN2P37802 199 aaKnown RBP9.61□□□□□ -0.87
CCHCR1-211ENST00000467553 GNG4P50150 75 aa9.61□□□□□ -0.87
CCHCR1-211ENST00000467553 ZFP2Q6ZN57 461 aa9.61□□□□□ -0.87
CCHCR1-211ENST00000467553 Q6ZSN1 163 aa9.61□□□□□ -0.87
CCHCR1-211ENST00000467553 SH2D6Q7Z4S9 175 aa9.61□□□□□ -0.87
CCHCR1-211ENST00000467553 DAZAP1Q96EP5 407 aaKnown RBP9.61□□□□□ -0.87
CCHCR1-211ENST00000467553 SCRT2Q9NQ03 307 aa9.61□□□□□ -0.87
CCHCR1-211ENST00000467553 K7EP13 123 aa9.6□□□□□ -0.87
CCHCR1-211ENST00000467553 IGLV2-8P01709 118 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms