RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 UBE2E1P51965 193 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 C19orf54Q5BKX5 351 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 PRO1854Q9UHT4 67 aa11.77□□□□□ -0.53
CHD1L-205ENST00000467213 TRBV6-5A0A0K0K1A5 114 aa11.76□□□□□ -0.53
CHD1L-205ENST00000467213 AJUBAQ96IF1 538 aa11.76□□□□□ -0.53
CHD1L-205ENST00000467213 S100A4P26447 101 aaKnown RBP11.76□□□□□ -0.53
CHD1L-205ENST00000467213 LINC00315P59091 139 aa11.76□□□□□ -0.53
CHD1L-205ENST00000467213 AMELXQ99217 191 aa11.76□□□□□ -0.53
CHD1L-205ENST00000467213 IGHV3OR16-8A0A075B7F1 116 aa11.75□□□□□ -0.53
CHD1L-205ENST00000467213 A0A0B4J2C4 111 aa11.75□□□□□ -0.53
CHD1L-205ENST00000467213 IGHV3-35A0A0C4DH35 117 aa11.75□□□□□ -0.53
CHD1L-205ENST00000467213 ZNF876PQ49A33 203 aa11.75□□□□□ -0.53
CHD1L-205ENST00000467213 C14orf178Q8N769 122 aaPredicted RBP11.75□□□□□ -0.53
CHD1L-205ENST00000467213 KLK15Q9H2R5 256 aa11.75□□□□□ -0.53
CHD1L-205ENST00000467213 A0A0J9YX75 114 aa11.75□□□□□ -0.53
CHD1L-205ENST00000467213 VCYO14598 125 aa11.75□□□□□ -0.53
CHD1L-205ENST00000467213 PKDREJQ9NTG1 2253 aa11.75□□□□□ -0.53
CHD1L-205ENST00000467213 RNASE3P12724 160 aaKnown RBP11.74□□□□□ -0.53
CHD1L-205ENST00000467213 SRD5A1P18405 259 aa11.74□□□□□ -0.53
CHD1L-205ENST00000467213 ECSCRQ19T08 205 aa11.74□□□□□ -0.53
CHD1L-205ENST00000467213 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
CHD1L-205ENST00000467213 CITED1Q99966 193 aa11.74□□□□□ -0.53
CHD1L-205ENST00000467213 DUSP14O95147 198 aaKnown RBP11.74□□□□□ -0.53
CHD1L-205ENST00000467213 IGHV1-69P01742 117 aa11.74□□□□□ -0.53
CHD1L-205ENST00000467213 SPANXA1Q9NS26 97 aa11.74□□□□□ -0.53
CHD1L-205ENST00000467213 SH3BGRL2Q9UJC5 107 aa11.74□□□□□ -0.53
CHD1L-205ENST00000467213 ANXA2RQ3ZCQ2 193 aa11.73□□□□□ -0.53
CHD1L-205ENST00000467213 Q6ZQT7 251 aa11.73□□□□□ -0.53
CHD1L-205ENST00000467213 IGHV3-66A0A0C4DH42 116 aa11.73□□□□□ -0.53
CHD1L-205ENST00000467213 TRBV27A0A0K0K1C4 114 aa11.73□□□□□ -0.53
CHD1L-205ENST00000467213 NDUFA4O00483 81 aa11.73□□□□□ -0.53
CHD1L-205ENST00000467213 Q6Q795 121 aa11.73□□□□□ -0.53
CHD1L-205ENST00000467213 ROS1P08922 2347 aa11.73□□□□□ -0.53
CHD1L-205ENST00000467213 ZFAND6Q6FIF0 208 aa11.72□□□□□ -0.53
CHD1L-205ENST00000467213 KLHL30-AS1Q8NEE0 82 aa11.72□□□□□ -0.53
CHD1L-205ENST00000467213 TP53TG1Q9Y2A0 90 aa11.72□□□□□ -0.53
CHD1L-205ENST00000467213 LINC01560Q8TB33 94 aa11.72□□□□□ -0.53
CHD1L-205ENST00000467213 KIR2DL4Q99706 377 aa11.72□□□□□ -0.53
CHD1L-205ENST00000467213 LAMA5O15230 3695 aa11.71□□□□□ -0.53
CHD1L-205ENST00000467213 LEPROTO15243 131 aa11.71□□□□□ -0.53
CHD1L-205ENST00000467213 SCGB1C2P0DMR2 95 aa11.71□□□□□ -0.53
CHD1L-205ENST00000467213 ANKRD29Q8N6D5 301 aa11.71□□□□□ -0.53
CHD1L-205ENST00000467213 KALRNO60229 2985 aa11.71□□□□□ -0.54
CHD1L-205ENST00000467213 LGALS9O00182 355 aa11.71□□□□□ -0.54
CHD1L-205ENST00000467213 MGPP08493 103 aa11.71□□□□□ -0.54
CHD1L-205ENST00000467213 RHOHQ15669 191 aa11.71□□□□□ -0.54
CHD1L-205ENST00000467213 C5orf56Q8N8D9 126 aa11.71□□□□□ -0.54
CHD1L-205ENST00000467213 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.7□□□□□ -0.54
CHD1L-205ENST00000467213 H3BUA1 57 aa11.7□□□□□ -0.54
CHD1L-205ENST00000467213 J3QQQ9 107 aa11.7□□□□□ -0.54
CHD1L-205ENST00000467213 NSUN5P1Q3KNT7 163 aa11.7□□□□□ -0.54
CHD1L-205ENST00000467213 SDHAF1A6NFY7 115 aa11.7□□□□□ -0.54
CHD1L-205ENST00000467213 KLLNB2CW77 178 aa11.7□□□□□ -0.54
CHD1L-205ENST00000467213 IGHV3-33P01772 117 aa11.7□□□□□ -0.54
CHD1L-205ENST00000467213 RPL13AP40429 203 aaKnown RBP11.7□□□□□ -0.54
CHD1L-205ENST00000467213 SLC25A20O43772 301 aa11.69□□□□□ -0.54
CHD1L-205ENST00000467213 TEX29Q8N6K0 151 aa11.69□□□□□ -0.54
CHD1L-205ENST00000467213 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
CHD1L-205ENST00000467213 PTH2Q96A98 100 aa11.69□□□□□ -0.54
CHD1L-205ENST00000467213 IGF1P05019 195 aa11.69□□□□□ -0.54
CHD1L-205ENST00000467213 Q5PR19 223 aa11.69□□□□□ -0.54
CHD1L-205ENST00000467213 WFDC12Q8WWY7 111 aa11.69□□□□□ -0.54
CHD1L-205ENST00000467213 DMXL2Q8TDJ6 3036 aa11.69□□□□□ -0.54
CHD1L-205ENST00000467213 RHODO00212 210 aa11.68□□□□□ -0.54
CHD1L-205ENST00000467213 ZFP36P26651 326 aaKnown RBP11.68□□□□□ -0.54
CHD1L-205ENST00000467213 TSPEAR-AS2P59090 65 aa11.68□□□□□ -0.54
CHD1L-205ENST00000467213 G3V318 75 aa11.68□□□□□ -0.54
CHD1L-205ENST00000467213 LGALS3P17931 250 aaKnown RBP11.68□□□□□ -0.54
CHD1L-205ENST00000467213 Q6ZS46 218 aa11.68□□□□□ -0.54
CHD1L-205ENST00000467213 TMEM223A0PJW6 202 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 GAGE5Q13069 117 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 GAGE6Q13070 117 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 ZNRF2Q8NHG8 242 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 ODF3Q96PU9 254 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 MDFICQ9P1T7 246 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 MRPL23Q16540 153 aaKnown RBP11.67□□□□□ -0.54
CHD1L-205ENST00000467213 SUMO4Q6EEV6 95 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 TRAV41A0A0B4J266 112 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 ARL3P36405 182 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 RNF183Q96D59 192 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 USMG5Q96IX5 58 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 ANAPC13Q9BS18 74 aa11.67□□□□□ -0.54
CHD1L-205ENST00000467213 CSMD1Q96PZ7 3565 aa11.66□□□□□ -0.54
CHD1L-205ENST00000467213 POLEQ07864 2286 aa11.66□□□□□ -0.54
CHD1L-205ENST00000467213 TRBV30A0A0K0K1B3 111 aa11.66□□□□□ -0.54
CHD1L-205ENST00000467213 ZNF318Q5VUA4 2279 aa11.66□□□□□ -0.54
CHD1L-205ENST00000467213 RNASE4P34096 147 aaKnown RBP11.66□□□□□ -0.54
CHD1L-205ENST00000467213 ATXN8Q156A1 80 aa11.66□□□□□ -0.54
CHD1L-205ENST00000467213 MOB4Q9Y3A3 225 aa11.66□□□□□ -0.54
CHD1L-205ENST00000467213 IGHV3-49A0A0A0MS15 119 aa11.65□□□□□ -0.54
CHD1L-205ENST00000467213 GNRH2O43555 120 aa11.65□□□□□ -0.54
CHD1L-205ENST00000467213 SAA4P35542 130 aa11.65□□□□□ -0.54
CHD1L-205ENST00000467213 ARHGAP32A7KAX9 2087 aa11.65□□□□□ -0.54
CHD1L-205ENST00000467213 LY6HO94772 140 aa11.65□□□□□ -0.54
CHD1L-205ENST00000467213 TMEM170BQ5T4T1 132 aa11.65□□□□□ -0.54
CHD1L-205ENST00000467213 OTOGLQ3ZCN5 2332 aa11.65□□□□□ -0.55
CHD1L-205ENST00000467213 A4D1N5 150 aa11.64□□□□□ -0.55
CHD1L-205ENST00000467213 M0R2P5 195 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms