RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 SPINK9Q5DT21 86 aa0.91□□□□□ -2.26
VPS13A-209ENST00000467124 ATP11AUNQ6ZP68 121 aa0.91□□□□□ -2.26
VPS13A-209ENST00000467124 CCDC171Q6TFL3 1326 aa0.9□□□□□ -2.26
VPS13A-209ENST00000467124 ZNF462Q96JM2 2506 aa0.9□□□□□ -2.26
VPS13A-209ENST00000467124 DISP2A7MBM2 1401 aa0.9□□□□□ -2.26
VPS13A-209ENST00000467124 SOGA1O94964 1423 aa0.9□□□□□ -2.26
VPS13A-209ENST00000467124 M0R2P5 195 aa0.9□□□□□ -2.27
VPS13A-209ENST00000467124 YPEL1O60688 119 aa0.9□□□□□ -2.27
VPS13A-209ENST00000467124 ARPC4P59998 168 aa0.9□□□□□ -2.27
VPS13A-209ENST00000467124 KNTC1P50748 2209 aa0.89□□□□□ -2.27
VPS13A-209ENST00000467124 CASZ1Q86V15 1759 aa0.89□□□□□ -2.27
VPS13A-209ENST00000467124 A0A0D9SG42 100 aa0.89□□□□□ -2.27
VPS13A-209ENST00000467124 NPFFO15130 113 aa0.89□□□□□ -2.27
VPS13A-209ENST00000467124 PPDPFLQ8WWR9 84 aa0.89□□□□□ -2.27
VPS13A-209ENST00000467124 IFI27L1Q96BM0 104 aa0.89□□□□□ -2.27
VPS13A-209ENST00000467124 PFDN5Q99471 154 aa0.89□□□□□ -2.27
VPS13A-209ENST00000467124 TSPAN19P0C672 248 aa0.88□□□□□ -2.27
VPS13A-209ENST00000467124 RPS25P62851 125 aaKnown RBP0.88□□□□□ -2.27
VPS13A-209ENST00000467124 DEFB132Q7Z7B7 95 aa0.88□□□□□ -2.27
VPS13A-209ENST00000467124 TCRBV3S1A0A5B6 114 aa0.87□□□□□ -2.27
VPS13A-209ENST00000467124 ZNF670-ZNF695F2Z2N8 137 aa0.87□□□□□ -2.27
VPS13A-209ENST00000467124 APOC1P02654 83 aa0.87□□□□□ -2.27
VPS13A-209ENST00000467124 COPZ1P61923 177 aa0.87□□□□□ -2.27
VPS13A-209ENST00000467124 LINC01545Q5VT33 79 aa0.87□□□□□ -2.27
VPS13A-209ENST00000467124 ATOH7Q8N100 152 aa0.87□□□□□ -2.27
VPS13A-209ENST00000467124 TSKUQ8WUA8 353 aa0.87□□□□□ -2.27
VPS13A-209ENST00000467124 TMEM141Q96I45 108 aa0.87□□□□□ -2.27
VPS13A-209ENST00000467124 VPS25Q9BRG1 176 aa0.87□□□□□ -2.27
VPS13A-209ENST00000467124 PSMG3Q9BT73 122 aaPredicted RBP0.87□□□□□ -2.27
VPS13A-209ENST00000467124 NDUFA12Q9UI09 145 aa0.87□□□□□ -2.27
VPS13A-209ENST00000467124 RREB1Q92766 1687 aa0.87□□□□□ -2.27
VPS13A-209ENST00000467124 SPAG17Q6Q759 2223 aa0.87□□□□□ -2.27
VPS13A-209ENST00000467124 ATG2AQ2TAZ0 1938 aa0.86□□□□□ -2.27
VPS13A-209ENST00000467124 PITX3O75364 302 aa0.86□□□□□ -2.27
VPS13A-209ENST00000467124 NPC2P61916 151 aa0.86□□□□□ -2.27
VPS13A-209ENST00000467124 CCDC58Q4VC31 144 aa0.86□□□□□ -2.27
VPS13A-209ENST00000467124 PRG4Q92954 1404 aaPredicted RBP0.86□□□□□ -2.27
VPS13A-209ENST00000467124 ABCA4P78363 2273 aa0.86□□□□□ -2.27
VPS13A-209ENST00000467124 PIRTP0C851 137 aa0.85□□□□□ -2.27
VPS13A-209ENST00000467124 RRAS2P62070 204 aaPredicted RBP0.85□□□□□ -2.27
VPS13A-209ENST00000467124 BCORL1Q5H9F3 1711 aa0.85□□□□□ -2.27
VPS13A-209ENST00000467124 OR2T2Q6IF00 324 aa0.85□□□□□ -2.27
VPS13A-209ENST00000467124 Q6ZUT4 128 aa0.85□□□□□ -2.27
VPS13A-209ENST00000467124 VSTM2AQ8TAG5 236 aa0.85□□□□□ -2.27
VPS13A-209ENST00000467124 TCEAL4Q96EI5 215 aa0.85□□□□□ -2.27
VPS13A-209ENST00000467124 SAR1AQ9NR31 198 aa0.85□□□□□ -2.27
VPS13A-209ENST00000467124 LOC285556D6RIA3 1793 aa0.85□□□□□ -2.27
VPS13A-209ENST00000467124 NOTCH1P46531 2555 aa0.85□□□□□ -2.27
VPS13A-209ENST00000467124 AFDNP55196 1824 aaKnown RBP0.85□□□□□ -2.27
VPS13A-209ENST00000467124 MYH13Q9UKX3 1938 aa0.84□□□□□ -2.27
VPS13A-209ENST00000467124 TRAV2A0A0B4J234 112 aa0.84□□□□□ -2.27
VPS13A-209ENST00000467124 KLKP1Q107X0 134 aa0.84□□□□□ -2.27
VPS13A-209ENST00000467124 S100A7L2Q5SY68 101 aa0.84□□□□□ -2.27
VPS13A-209ENST00000467124 C10orf99Q6UWK7 81 aa0.84□□□□□ -2.27
VPS13A-209ENST00000467124 CYP2G1PQ6ZSU1 146 aa0.84□□□□□ -2.27
VPS13A-209ENST00000467124 TMEM14BQ9NUH8 114 aa0.84□□□□□ -2.27
VPS13A-209ENST00000467124 ERG28Q9UKR5 140 aa0.84□□□□□ -2.27
VPS13A-209ENST00000467124 UHRF1BP1LA0JNW5 1464 aa0.84□□□□□ -2.28
VPS13A-209ENST00000467124 PTPRMP28827 1452 aa0.84□□□□□ -2.28
VPS13A-209ENST00000467124 FBN2P35556 2912 aa0.84□□□□□ -2.28
VPS13A-209ENST00000467124 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
VPS13A-209ENST00000467124 TEX49A0A1B0GTD5 131 aa0.83□□□□□ -2.28
VPS13A-209ENST00000467124 ELOF1P60002 83 aaKnown RBP0.83□□□□□ -2.28
VPS13A-209ENST00000467124 S100A12P80511 92 aa0.83□□□□□ -2.28
VPS13A-209ENST00000467124 SPCS2Q15005 226 aa0.83□□□□□ -2.28
VPS13A-209ENST00000467124 SPINK13Q1W4C9 94 aa0.83□□□□□ -2.28
VPS13A-209ENST00000467124 ABCA1O95477 2261 aa0.83□□□□□ -2.28
VPS13A-209ENST00000467124 TRAV12-3A0A0B4J271 114 aa0.82□□□□□ -2.28
VPS13A-209ENST00000467124 NDUFA2O43678 99 aa0.82□□□□□ -2.28
VPS13A-209ENST00000467124 NCR2O95944 276 aa0.82□□□□□ -2.28
VPS13A-209ENST00000467124 IL5P05113 134 aa0.82□□□□□ -2.28
VPS13A-209ENST00000467124 PYYP10082 97 aa0.82□□□□□ -2.28
VPS13A-209ENST00000467124 FXYD6P3P58550 94 aa0.82□□□□□ -2.28
VPS13A-209ENST00000467124 RPL37P61927 97 aaKnown RBP0.82□□□□□ -2.28
VPS13A-209ENST00000467124 UBE2G1P62253 170 aa0.82□□□□□ -2.28
VPS13A-209ENST00000467124 RPL7L1Q6DKI1 246 aaKnown RBP0.82□□□□□ -2.28
VPS13A-209ENST00000467124 DLEC1Q9Y238 1755 aa0.82□□□□□ -2.28
VPS13A-209ENST00000467124 ESPL1Q14674 2120 aa0.82□□□□□ -2.28
VPS13A-209ENST00000467124 SPANXN1Q5VSR9 72 aa0.81□□□□□ -2.28
VPS13A-209ENST00000467124 KRTAP19-3Q7Z4W3 81 aa0.81□□□□□ -2.28
VPS13A-209ENST00000467124 SDF2Q99470 211 aa0.81□□□□□ -2.28
VPS13A-209ENST00000467124 TSC22D3Q99576 134 aa0.81□□□□□ -2.28
VPS13A-209ENST00000467124 FAM103A1Q9BTL3 118 aaKnown RBP0.81□□□□□ -2.28
VPS13A-209ENST00000467124 TMEM242Q9NWH2 141 aa0.81□□□□□ -2.28
VPS13A-209ENST00000467124 COA4Q9NYJ1 87 aa0.81□□□□□ -2.28
VPS13A-209ENST00000467124 BLMP54132 1417 aaPredicted RBP0.81□□□□□ -2.28
VPS13A-209ENST00000467124 KIF13AQ9H1H9 1805 aa0.8□□□□□ -2.28
VPS13A-209ENST00000467124 BICRAQ9NZM4 1560 aa0.8□□□□□ -2.28
VPS13A-209ENST00000467124 CCDC179H3BU77 68 aa0.8□□□□□ -2.28
VPS13A-209ENST00000467124 GNG7O60262 68 aa0.8□□□□□ -2.28
VPS13A-209ENST00000467124 HMGN1P05114 100 aa0.8□□□□□ -2.28
VPS13A-209ENST00000467124 SLC48A1Q6P1K1 146 aa0.8□□□□□ -2.28
VPS13A-209ENST00000467124 SPATA8Q6RVD6 105 aa0.8□□□□□ -2.28
VPS13A-209ENST00000467124 C20orf197Q8N268 126 aa0.8□□□□□ -2.28
VPS13A-209ENST00000467124 KCNRGQ8N5I3 272 aa0.8□□□□□ -2.28
VPS13A-209ENST00000467124 C10orf82Q8WW14 230 aa0.8□□□□□ -2.28
VPS13A-209ENST00000467124 DSCR8Q96T75 97 aa0.8□□□□□ -2.28
VPS13A-209ENST00000467124 C10orf95Q9H7T3 257 aa0.8□□□□□ -2.28
VPS13A-209ENST00000467124 IBTKQ9P2D0 1353 aaPredicted RBP0.8□□□□□ -2.28
VPS13A-209ENST00000467124 SNCGO76070 127 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms