RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 B2MP61769 119 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 SNRPD3P62318 126 aaKnown RBP2.16□□□□□ -2.06
CALD1-214ENST00000466704 CLINT1Q14677 625 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 Q5BKY6 102 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 PSMG4Q5JS54 123 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 MIC13Q5XKP0 118 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 PATE2Q6UY27 113 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 LINC00322Q6ZN03 302 aaPredicted RBP2.16□□□□□ -2.06
CALD1-214ENST00000466704 LINC00173Q6ZV60 143 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 LINC00305Q7Z4B0 112 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 APRG1Q8IVJ8 170 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 FAM24BQ8N5W8 94 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 OR4C5Q8NGB2 326 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 OR10G4Q8NGN3 311 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 OR2T35Q8NGX2 323 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 DCANP1Q8TF63 244 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 ASB13Q8WXK3 278 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 GPR82Q96P67 336 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 AQP10Q96PS8 301 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 ATP5SQ99766 215 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 SHANK2-AS3Q9BTD1 123 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 GGTLC1Q9BX51 225 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 SMIM3Q9BZL3 60 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 WDR61Q9GZS3 305 aaKnown RBP2.16□□□□□ -2.06
CALD1-214ENST00000466704 ARV1Q9H2C2 271 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 SLC39A9Q9NUM3 307 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 HIGD1AQ9Y241 93 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 HSPB11Q9Y547 144 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 PXMP4Q9Y6I8 212 aa2.16□□□□□ -2.06
CALD1-214ENST00000466704 DNAH3Q8TD57 4116 aa2.15□□□□□ -2.06
CALD1-214ENST00000466704 FXYD6-FXYD2A0A087WZ82 144 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 TRAV5A0A0B4J249 113 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 KNCNA6PVL3 124 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 ISLRO14498 428 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 RPL7P18124 248 aaKnown RBP2.15□□□□□ -2.07
CALD1-214ENST00000466704 ZNF266Q14584 549 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 ACTL10Q5JWF8 245 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 FAM78BQ5VT40 261 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 SAMD13Q5VXD3 122 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 C10orf113Q5VZT2 155 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 BPIFA4PQ86YQ2 179 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 INO80EQ8NBZ0 244 aaPredicted RBP2.15□□□□□ -2.07
CALD1-214ENST00000466704 LRRC20Q8TCA0 184 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 SCGB1C1Q8TD33 95 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 LINC00052Q96N35 136 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 PFDN5Q99471 154 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 TM2D3Q9BRN9 247 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 RSG1Q9BU20 258 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 NPCDR1Q9BY65 106 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 WFDC1Q9HC57 220 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 KCNIP2Q9NS61 270 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 TNFSF18Q9UNG2 199 aa2.15□□□□□ -2.07
CALD1-214ENST00000466704 CSDC2Q9Y534 153 aaKnown RBP2.15□□□□□ -2.07
CALD1-214ENST00000466704 TENM3Q9P273 2699 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 BORCS7-ASMTA0A0B4J1R7 106 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 A0A1W2PPV4 95 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 COLCA2A8K830 154 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 G3V3Q6 166 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 H3BMM0 161 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 SMLR1H3BR10 107 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 MRPS12O15235 138 aaKnown RBP2.14□□□□□ -2.07
CALD1-214ENST00000466704 ARPC5O15511 151 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 HIST1H1EP10412 219 aaKnown RBP2.14□□□□□ -2.07
CALD1-214ENST00000466704 M6PRP20645 277 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 PSMB3P49720 205 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 DEFB1P60022 68 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 NUTF2P61970 127 aaKnown RBP2.14□□□□□ -2.07
CALD1-214ENST00000466704 ERCC8Q13216 396 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 GUK1Q16774 197 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 ACOT6Q3I5F7 207 aaPredicted RBP2.14□□□□□ -2.07
CALD1-214ENST00000466704 GCSAMLQ5JQS6 135 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 SPATA31B1PQ5VZV4 182 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 RPL7L1Q6DKI1 246 aaKnown RBP2.14□□□□□ -2.07
CALD1-214ENST00000466704 EBLN2Q6P2I7 272 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 ZNF493Q6ZR52 646 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 MIR17HGQ75NE6 70 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 HSD17B11Q8NBQ5 300 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 RARRES2Q99969 163 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 SLC50A1Q9BRV3 221 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 MRPL32Q9BYC8 188 aaKnown RBP2.14□□□□□ -2.07
CALD1-214ENST00000466704 PARD6GQ9BYG4 376 aaPredicted RBP2.14□□□□□ -2.07
CALD1-214ENST00000466704 OR51M1Q9H341 326 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 RPP21Q9H633 154 aaKnown RBP2.14□□□□□ -2.07
CALD1-214ENST00000466704 RETNQ9HD89 108 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 RPRMQ9NS64 109 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 FUT9Q9Y231 359 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 U3KQK5 164 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 DNAH9Q9NYC9 4486 aa2.14□□□□□ -2.07
CALD1-214ENST00000466704 SACSQ9NZJ4 4579 aa2.13□□□□□ -2.07
CALD1-214ENST00000466704 HUWE1Q7Z6Z7 4374 aaKnown RBP2.13□□□□□ -2.07
CALD1-214ENST00000466704 TRBV19A0A075B6N1 114 aa2.13□□□□□ -2.07
CALD1-214ENST00000466704 TRAV8-2A0A0B4J237 113 aa2.13□□□□□ -2.07
CALD1-214ENST00000466704 A0A0J9YX75 114 aa2.13□□□□□ -2.07
CALD1-214ENST00000466704 HMSDA8MTL9 139 aa2.13□□□□□ -2.07
CALD1-214ENST00000466704 F6UB75 175 aa2.13□□□□□ -2.07
CALD1-214ENST00000466704 H3BQ15 152 aa2.13□□□□□ -2.07
CALD1-214ENST00000466704 TAAR5O14804 337 aa2.13□□□□□ -2.07
CALD1-214ENST00000466704 PLXNB1O43157 2135 aa2.13□□□□□ -2.07
CALD1-214ENST00000466704 OR7C2O60412 319 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms