RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.16□□□□□ -2.06
PTCD3-205ENST00000464541 LINC00299Q6ZSB3 139 aa2.16□□□□□ -2.06
PTCD3-205ENST00000464541 FP248Q71RG6 208 aaPredicted RBP2.16□□□□□ -2.06
PTCD3-205ENST00000464541 C4orf33Q8N1A6 199 aa2.16□□□□□ -2.06
PTCD3-205ENST00000464541 VAMP8Q9BV40 100 aa2.16□□□□□ -2.06
PTCD3-205ENST00000464541 MYH1P12882 1939 aa2.16□□□□□ -2.06
PTCD3-205ENST00000464541 KIF13AQ9H1H9 1805 aa2.16□□□□□ -2.06
PTCD3-205ENST00000464541 MYLKQ15746 1914 aa2.15□□□□□ -2.06
PTCD3-205ENST00000464541 ARHGAP32A7KAX9 2087 aa2.15□□□□□ -2.07
PTCD3-205ENST00000464541 TRGV4A0A0C4DH28 118 aa2.15□□□□□ -2.07
PTCD3-205ENST00000464541 TMEM30CPA0ZSE6 113 aa2.15□□□□□ -2.07
PTCD3-205ENST00000464541 H3BRN7 92 aa2.15□□□□□ -2.07
PTCD3-205ENST00000464541 KRTAP12-1P59990 96 aa2.15□□□□□ -2.07
PTCD3-205ENST00000464541 C9orf116Q5BN46 136 aaPredicted RBP2.15□□□□□ -2.07
PTCD3-205ENST00000464541 SLC48A1Q6P1K1 146 aa2.15□□□□□ -2.07
PTCD3-205ENST00000464541 KRTAP26-1Q6PEX3 210 aa2.15□□□□□ -2.07
PTCD3-205ENST00000464541 NDUFA11Q86Y39 141 aa2.15□□□□□ -2.07
PTCD3-205ENST00000464541 C9orf62Q8N4C0 152 aa2.15□□□□□ -2.07
PTCD3-205ENST00000464541 LINC00052Q96N35 136 aa2.15□□□□□ -2.07
PTCD3-205ENST00000464541 DSCR8Q96T75 97 aa2.15□□□□□ -2.07
PTCD3-205ENST00000464541 HELZP42694 1942 aaKnown RBP2.15□□□□□ -2.07
PTCD3-205ENST00000464541 GLI3P10071 1580 aa2.15□□□□□ -2.07
PTCD3-205ENST00000464541 TEX14Q8IWB6 1497 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 MGAMO43451 1857 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 BAHCC1Q9P281 2608 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 TRBV6-8A0A0A6YYG3 113 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 CCL16O15467 120 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 SNCAP37840 140 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 KRTDAPP60985 99 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 S100A7L2Q5SY68 101 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 SBSPONQ8IVN8 264 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 Q8N8P6 123 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 DPH3P1Q9H4G8 78 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 USP54Q70EL1 1684 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 QRICH2Q9H0J4 1663 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 CCDC18Q5T9S5 1454 aa2.14□□□□□ -2.07
PTCD3-205ENST00000464541 SLC25A6P12236 298 aa2.13□□□□□ -2.07
PTCD3-205ENST00000464541 IL7P13232 177 aa2.13□□□□□ -2.07
PTCD3-205ENST00000464541 UBE2G1P62253 170 aa2.13□□□□□ -2.07
PTCD3-205ENST00000464541 RBM3P98179 157 aaKnown RBP2.13□□□□□ -2.07
PTCD3-205ENST00000464541 COMMD6Q7Z4G1 85 aa2.13□□□□□ -2.07
PTCD3-205ENST00000464541 MYOZ3Q8TDC0 251 aa2.13□□□□□ -2.07
PTCD3-205ENST00000464541 KLK9Q9UKQ9 250 aa2.13□□□□□ -2.07
PTCD3-205ENST00000464541 BAZ1AQ9NRL2 1556 aaPredicted RBP2.13□□□□□ -2.07
PTCD3-205ENST00000464541 ADGRL2O95490 1459 aa2.13□□□□□ -2.07
PTCD3-205ENST00000464541 HEATR5BQ9P2D3 2071 aa2.13□□□□□ -2.07
PTCD3-205ENST00000464541 FREM3P0C091 2139 aa2.12□□□□□ -2.07
PTCD3-205ENST00000464541 COL5A3P25940 1745 aaPredicted RBP2.12□□□□□ -2.07
PTCD3-205ENST00000464541 TRBV10-3A0A0K0K1G6 114 aa2.12□□□□□ -2.07
PTCD3-205ENST00000464541 INSL4Q14641 139 aa2.12□□□□□ -2.07
PTCD3-205ENST00000464541 LYPD5Q6UWN5 251 aa2.12□□□□□ -2.07
PTCD3-205ENST00000464541 CRCT1Q9UGL9 99 aa2.12□□□□□ -2.07
PTCD3-205ENST00000464541 FYCO1Q9BQS8 1478 aa2.12□□□□□ -2.07
PTCD3-205ENST00000464541 MUC4Q99102 2169 aa2.11□□□□□ -2.07
PTCD3-205ENST00000464541 TRBV10-1A0A0K0K1A3 114 aa2.11□□□□□ -2.07
PTCD3-205ENST00000464541 TPRXLQ17RH7 258 aa2.11□□□□□ -2.07
PTCD3-205ENST00000464541 PATE1Q8WXA2 126 aa2.11□□□□□ -2.07
PTCD3-205ENST00000464541 DMAC1Q96GE9 116 aa2.11□□□□□ -2.07
PTCD3-205ENST00000464541 TXNDC17Q9BRA2 123 aa2.11□□□□□ -2.07
PTCD3-205ENST00000464541 MRPL35Q9NZE8 188 aaKnown RBP2.11□□□□□ -2.07
PTCD3-205ENST00000464541 C22orf24Q9Y442 160 aa2.11□□□□□ -2.07
PTCD3-205ENST00000464541 LTBP2Q14767 1821 aa2.11□□□□□ -2.07
PTCD3-205ENST00000464541 PXDNLA1KZ92 1463 aa2.11□□□□□ -2.07
PTCD3-205ENST00000464541 IFT140Q96RY7 1462 aa2.11□□□□□ -2.07
PTCD3-205ENST00000464541 SORL1Q92673 2214 aa2.11□□□□□ -2.07
PTCD3-205ENST00000464541 DISP1Q96F81 1524 aa2.11□□□□□ -2.07
PTCD3-205ENST00000464541 KIDINS220Q9ULH0 1771 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 CPSF1Q10570 1443 aaKnown RBP2.1□□□□□ -2.07
PTCD3-205ENST00000464541 C10orf71Q711Q0 1435 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 A0A0J9YY99 117 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 RBAKDNA6NC62 111 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 NUPR1O60356 82 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 IGKCP01834 107 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 KRTAP21-3Q3LHN1 58 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 C10orf55Q5SWW7 151 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 C15orf53Q8NAA6 179 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 SPTSSBQ8NFR3 76 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 LCN9Q8WX39 176 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 TTTY12Q9BZ98 90 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 CYP4F30PQ9H0H9 118 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 MRPL36Q9P0J6 103 aaKnown RBP2.1□□□□□ -2.07
PTCD3-205ENST00000464541 PRDM2Q13029 1718 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 COL24A1Q17RW2 1714 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 MYO9BQ13459 2157 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 AKAP12Q02952 1782 aa2.1□□□□□ -2.07
PTCD3-205ENST00000464541 ALPK3Q96L96 1907 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 AKAP11Q9UKA4 1901 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 ARHGAP5Q13017 1502 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 IGLV3-32A0A0A0MS00 114 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 TRAV13-2A0A0B4J235 113 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 CXorf51AA0A1B0GTR3 108 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 TRBV6-4A0A1B0GX49 114 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 NAP1L6A6NFF2 107 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 GNGT2O14610 69 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 GYPAP02724 150 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 PRB4P10163 310 aaPredicted RBP2.09□□□□□ -2.07
PTCD3-205ENST00000464541 ASIPP42127 132 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 CCL8P80075 99 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 SPACA4Q8TDM5 124 aa2.09□□□□□ -2.07
PTCD3-205ENST00000464541 BET1LQ9NYM9 111 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms