RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 IL36BQ9NZH7 164 aa13.29□□□□□ -0.28
LMNB1-204ENST00000463908 H3BVH4 76 aa13.28□□□□□ -0.28
LMNB1-204ENST00000463908 IGHV3-53P01767 116 aa13.28□□□□□ -0.28
LMNB1-204ENST00000463908 S100A4P26447 101 aaKnown RBP13.28□□□□□ -0.28
LMNB1-204ENST00000463908 ZNF876PQ49A33 203 aa13.28□□□□□ -0.28
LMNB1-204ENST00000463908 FAM210BQ96KR6 192 aa13.28□□□□□ -0.28
LMNB1-204ENST00000463908 SMDT1Q9H4I9 107 aa13.28□□□□□ -0.28
LMNB1-204ENST00000463908 SCRT2Q9NQ03 307 aa13.28□□□□□ -0.28
LMNB1-204ENST00000463908 MUC4Q99102 2169 aa13.27□□□□□ -0.28
LMNB1-204ENST00000463908 TCTAP57738 103 aa13.27□□□□□ -0.29
LMNB1-204ENST00000463908 FHL2Q14192 279 aa13.27□□□□□ -0.29
LMNB1-204ENST00000463908 NUDT10Q8NFP7 164 aa13.27□□□□□ -0.29
LMNB1-204ENST00000463908 NUDT11Q96G61 164 aa13.27□□□□□ -0.29
LMNB1-204ENST00000463908 ZNF479Q96JC4 524 aa13.27□□□□□ -0.29
LMNB1-204ENST00000463908 SMIM7Q9BQ49 75 aa13.27□□□□□ -0.29
LMNB1-204ENST00000463908 ZNF727A8MUV8 499 aa13.26□□□□□ -0.29
LMNB1-204ENST00000463908 SFTA3P0C7M3 94 aa13.26□□□□□ -0.29
LMNB1-204ENST00000463908 DAZAP1Q96EP5 407 aaKnown RBP13.26□□□□□ -0.29
LMNB1-204ENST00000463908 NDUFAF3Q9BU61 184 aa13.26□□□□□ -0.29
LMNB1-204ENST00000463908 BIN3Q9NQY0 253 aa13.26□□□□□ -0.29
LMNB1-204ENST00000463908 CXCL1P09341 107 aa13.25□□□□□ -0.29
LMNB1-204ENST00000463908 DMRTA1Q5VZB9 504 aa13.25□□□□□ -0.29
LMNB1-204ENST00000463908 SSBP4Q9BWG4 385 aaPredicted RBP13.25□□□□□ -0.29
LMNB1-204ENST00000463908 RNASE7Q9H1E1 156 aaKnown RBP13.25□□□□□ -0.29
LMNB1-204ENST00000463908 LY96Q9Y6Y9 160 aa13.25□□□□□ -0.29
LMNB1-204ENST00000463908 TRAV26-1A0A087WT03 109 aa13.24□□□□□ -0.29
LMNB1-204ENST00000463908 RS1O15537 224 aa13.24□□□□□ -0.29
LMNB1-204ENST00000463908 GZMBP10144 247 aa13.24□□□□□ -0.29
LMNB1-204ENST00000463908 LINC01551Q86U37 167 aa13.24□□□□□ -0.29
LMNB1-204ENST00000463908 OR2D3Q8NGH3 330 aa13.24□□□□□ -0.29
LMNB1-204ENST00000463908 VSIG2Q96IQ7 327 aa13.24□□□□□ -0.29
LMNB1-204ENST00000463908 TRAV4A0A0B4J268 109 aa13.23□□□□□ -0.29
LMNB1-204ENST00000463908 A0A0J9YY99 117 aa13.23□□□□□ -0.29
LMNB1-204ENST00000463908 LCE6AA0A183 80 aa13.23□□□□□ -0.29
LMNB1-204ENST00000463908 P01737 135 aa13.23□□□□□ -0.29
LMNB1-204ENST00000463908 MED14OSP0DP75 135 aa13.23□□□□□ -0.29
LMNB1-204ENST00000463908 PIK3CD-AS1Q5SR53 167 aa13.23□□□□□ -0.29
LMNB1-204ENST00000463908 CFAP126Q5VTH2 177 aa13.23□□□□□ -0.29
LMNB1-204ENST00000463908 OR4C5Q8NGB2 326 aa13.23□□□□□ -0.29
LMNB1-204ENST00000463908 JPT2Q9H910 190 aa13.23□□□□□ -0.29
LMNB1-204ENST00000463908 SNAI2O43623 268 aa13.22□□□□□ -0.29
LMNB1-204ENST00000463908 FAM74A3Q4VXF1 159 aa13.22□□□□□ -0.29
LMNB1-204ENST00000463908 PHLDA3Q9Y5J5 127 aa13.22□□□□□ -0.29
LMNB1-204ENST00000463908 IGLC6P0CF74 106 aa13.21□□□□□ -0.29
LMNB1-204ENST00000463908 TMEM241Q24JQ0 296 aa13.21□□□□□ -0.29
LMNB1-204ENST00000463908 FAM231DQ6ZW35 169 aa13.21□□□□□ -0.29
LMNB1-204ENST00000463908 LINC00476Q8WZB0 136 aa13.21□□□□□ -0.29
LMNB1-204ENST00000463908 HHLA3Q9XRX5 114 aa13.21□□□□□ -0.29
LMNB1-204ENST00000463908 MUC21A0A0G2JKD1 596 aa13.2□□□□□ -0.3
LMNB1-204ENST00000463908 MUC21A0A140T8X8 626 aa13.2□□□□□ -0.3
LMNB1-204ENST00000463908 OR5AL1P0C617 328 aa13.2□□□□□ -0.3
LMNB1-204ENST00000463908 CRYBA4P53673 196 aa13.2□□□□□ -0.3
LMNB1-204ENST00000463908 RPS20P60866 119 aaKnown RBP13.2□□□□□ -0.3
LMNB1-204ENST00000463908 OR10AG1Q8NH19 301 aa13.2□□□□□ -0.3
LMNB1-204ENST00000463908 SAMD10Q9BYL1 202 aa13.2□□□□□ -0.3
LMNB1-204ENST00000463908 TRGV4A0A0C4DH28 118 aa13.19□□□□□ -0.3
LMNB1-204ENST00000463908 H3BNG1 76 aa13.19□□□□□ -0.3
LMNB1-204ENST00000463908 M0R381 172 aa13.19□□□□□ -0.3
LMNB1-204ENST00000463908 RPL23P62829 140 aaKnown RBP13.19□□□□□ -0.3
LMNB1-204ENST00000463908 SOHLH1Q5JUK2 328 aa13.19□□□□□ -0.3
LMNB1-204ENST00000463908 LGALS9CQ6DKI2 356 aa13.19□□□□□ -0.3
LMNB1-204ENST00000463908 C15orf53Q8NAA6 179 aa13.19□□□□□ -0.3
LMNB1-204ENST00000463908 RPP21Q9H633 154 aaKnown RBP13.19□□□□□ -0.3
LMNB1-204ENST00000463908 PRO0255Q9UI72 69 aa13.19□□□□□ -0.3
LMNB1-204ENST00000463908 IGHV3-73A0A0B4J1V6 119 aa13.18□□□□□ -0.3
LMNB1-204ENST00000463908 A8MWV9 139 aa13.18□□□□□ -0.3
LMNB1-204ENST00000463908 NXPH4O95158 308 aa13.18□□□□□ -0.3
LMNB1-204ENST00000463908 NUDT3O95989 172 aa13.18□□□□□ -0.3
LMNB1-204ENST00000463908 UFSP1Q6NVU6 142 aa13.18□□□□□ -0.3
LMNB1-204ENST00000463908 SYT8Q8NBV8 401 aa13.18□□□□□ -0.3
LMNB1-204ENST00000463908 SFRP2Q96HF1 295 aa13.18□□□□□ -0.3
LMNB1-204ENST00000463908 NAT8Q9UHE5 227 aa13.18□□□□□ -0.3
LMNB1-204ENST00000463908 PAX4O43316 350 aa13.17□□□□□ -0.3
LMNB1-204ENST00000463908 GATCO43716 136 aaKnown RBP13.17□□□□□ -0.3
LMNB1-204ENST00000463908 LY6G6CO95867 125 aa13.17□□□□□ -0.3
LMNB1-204ENST00000463908 CRYGDP07320 174 aa13.17□□□□□ -0.3
LMNB1-204ENST00000463908 GATA1P15976 413 aaPredicted RBP13.17□□□□□ -0.3
LMNB1-204ENST00000463908 ERVFC1-1P60608 527 aa13.17□□□□□ -0.3
LMNB1-204ENST00000463908 SLAQ13239 276 aa13.17□□□□□ -0.3
LMNB1-204ENST00000463908 Q6ZSN1 163 aa13.17□□□□□ -0.3
LMNB1-204ENST00000463908 ZFP82Q8N141 532 aa13.17□□□□□ -0.3
LMNB1-204ENST00000463908 FER1L6-AS1Q8NA97 138 aa13.17□□□□□ -0.3
LMNB1-204ENST00000463908 VPS13DQ5THJ4 4388 aa13.17□□□□□ -0.3
LMNB1-204ENST00000463908 ALMS1Q8TCU4 4167 aa13.17□□□□□ -0.3
LMNB1-204ENST00000463908 A0A096LPF7 62 aa13.16□□□□□ -0.3
LMNB1-204ENST00000463908 XKRY2A2RUG3 117 aa13.16□□□□□ -0.3
LMNB1-204ENST00000463908 CIDEAO60543 219 aa13.16□□□□□ -0.3
LMNB1-204ENST00000463908 SSTP61278 116 aa13.16□□□□□ -0.3
LMNB1-204ENST00000463908 GTSF1Q8WW33 167 aa13.16□□□□□ -0.3
LMNB1-204ENST00000463908 ISOC2Q96AB3 205 aa13.16□□□□□ -0.3
LMNB1-204ENST00000463908 OSTCQ9NRP0 149 aa13.16□□□□□ -0.3
LMNB1-204ENST00000463908 NACAE9PAV3 2078 aa13.16□□□□□ -0.3
LMNB1-204ENST00000463908 LYZL1Q6UWQ5 148 aa13.15□□□□□ -0.3
LMNB1-204ENST00000463908 ZFP2Q6ZN57 461 aa13.15□□□□□ -0.3
LMNB1-204ENST00000463908 A0A087WWL8 130 aa13.14□□□□□ -0.31
LMNB1-204ENST00000463908 SPANXN1Q5VSR9 72 aa13.14□□□□□ -0.31
LMNB1-204ENST00000463908 SLC25A29Q8N8R3 303 aa13.14□□□□□ -0.31
LMNB1-204ENST00000463908 TPPP3Q9BW30 176 aa13.14□□□□□ -0.31
LMNB1-204ENST00000463908 MSRB1Q9NZV6 116 aa13.14□□□□□ -0.31
LMNB1-204ENST00000463908 A0A1W2PPQ1 181 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms