RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 TRAV12-2A0A075B6T6 113 aa1.26□□□□□ -2.21
GPNMB-205ENST00000463011 DLEU1O43261 78 aa1.26□□□□□ -2.21
GPNMB-205ENST00000463011 IL5P05113 134 aa1.26□□□□□ -2.21
GPNMB-205ENST00000463011 CCKP06307 115 aa1.26□□□□□ -2.21
GPNMB-205ENST00000463011 DPH3Q96FX2 82 aa1.26□□□□□ -2.21
GPNMB-205ENST00000463011 NDUFA12Q9UI09 145 aa1.26□□□□□ -2.21
GPNMB-205ENST00000463011 FANCMQ8IYD8 2048 aa1.26□□□□□ -2.21
GPNMB-205ENST00000463011 MUC4Q99102 2169 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 PTPRMP28827 1452 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.25□□□□□ -2.21
GPNMB-205ENST00000463011 NBDYA0A0U1RRE5 68 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 FAM92AA1XBS5 289 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 FXYD3Q14802 87 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 SPANXN1Q5VSR9 72 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 XAF1Q6GPH4 301 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 LINC00575Q6W349 94 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 CCL19Q99731 98 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 TMEM242Q9NWH2 141 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 PHLPP1O60346 1717 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 TNRC6AQ8NDV7 1962 aaKnown RBP1.25□□□□□ -2.21
GPNMB-205ENST00000463011 CASP8AP2Q9UKL3 1982 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 PTPRDP23468 1912 aa1.25□□□□□ -2.21
GPNMB-205ENST00000463011 NCOA3Q9Y6Q9 1424 aa1.24□□□□□ -2.21
GPNMB-205ENST00000463011 LINC00587B1AMM8 73 aa1.24□□□□□ -2.21
GPNMB-205ENST00000463011 CCDC179H3BU77 68 aa1.24□□□□□ -2.21
GPNMB-205ENST00000463011 ARL14EPLP0DKL9 152 aa1.24□□□□□ -2.21
GPNMB-205ENST00000463011 HIST1H1DP16402 221 aaKnown RBP1.24□□□□□ -2.21
GPNMB-205ENST00000463011 KRTAP10-4P60372 401 aaPredicted RBP1.24□□□□□ -2.21
GPNMB-205ENST00000463011 OR2T2Q6IF00 324 aa1.24□□□□□ -2.21
GPNMB-205ENST00000463011 SPTSSAQ969W0 71 aa1.24□□□□□ -2.21
GPNMB-205ENST00000463011 PEG3Q9GZU2 1588 aa1.24□□□□□ -2.21
GPNMB-205ENST00000463011 MBD5Q9P267 1494 aa1.24□□□□□ -2.21
GPNMB-205ENST00000463011 CASZ1Q86V15 1759 aa1.24□□□□□ -2.21
GPNMB-205ENST00000463011 FBN1P35555 2871 aaKnown RBP1.23□□□□□ -2.21
GPNMB-205ENST00000463011 TRPM7Q96QT4 1865 aa1.23□□□□□ -2.21
GPNMB-205ENST00000463011 TRBV30A0A0K0K1B3 111 aa1.23□□□□□ -2.21
GPNMB-205ENST00000463011 LOC100130705A0A1B0GUX0 176 aa1.23□□□□□ -2.21
GPNMB-205ENST00000463011 SNCGO76070 127 aa1.23□□□□□ -2.21
GPNMB-205ENST00000463011 APOC1P02654 83 aa1.23□□□□□ -2.21
GPNMB-205ENST00000463011 APODP05090 189 aa1.23□□□□□ -2.21
GPNMB-205ENST00000463011 MEIG1Q5JSS6 88 aa1.23□□□□□ -2.21
GPNMB-205ENST00000463011 C5orf56Q8N8D9 126 aa1.23□□□□□ -2.21
GPNMB-205ENST00000463011 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.23□□□□□ -2.21
GPNMB-205ENST00000463011 IFI27L1Q96BM0 104 aa1.23□□□□□ -2.21
GPNMB-205ENST00000463011 LINC00208Q96KT6 92 aa1.23□□□□□ -2.21
GPNMB-205ENST00000463011 SEC11CQ9BY50 192 aa1.23□□□□□ -2.21
GPNMB-205ENST00000463011 RP1L1Q8IWN7 2480 aaPredicted RBP1.22□□□□□ -2.21
GPNMB-205ENST00000463011 FXYD1O00168 92 aa1.22□□□□□ -2.21
GPNMB-205ENST00000463011 PIPP12273 146 aaPredicted RBP1.22□□□□□ -2.21
GPNMB-205ENST00000463011 CAV3P56539 151 aa1.22□□□□□ -2.21
GPNMB-205ENST00000463011 RPL7L1Q6DKI1 246 aaKnown RBP1.22□□□□□ -2.21
GPNMB-205ENST00000463011 KRTAP5-7Q6L8G8 165 aa1.22□□□□□ -2.21
GPNMB-205ENST00000463011 SLC48A1Q6P1K1 146 aa1.22□□□□□ -2.21
GPNMB-205ENST00000463011 DEFB132Q7Z7B7 95 aa1.22□□□□□ -2.21
GPNMB-205ENST00000463011 TMEM141Q96I45 108 aa1.22□□□□□ -2.21
GPNMB-205ENST00000463011 MED13Q9UHV7 2174 aa1.22□□□□□ -2.21
GPNMB-205ENST00000463011 TET1Q8NFU7 2136 aa1.22□□□□□ -2.21
GPNMB-205ENST00000463011 TCRBV3S1A0A5B6 114 aa1.21□□□□□ -2.22
GPNMB-205ENST00000463011 S100A7L2Q5SY68 101 aa1.21□□□□□ -2.22
GPNMB-205ENST00000463011 TSKUQ8WUA8 353 aa1.21□□□□□ -2.22
GPNMB-205ENST00000463011 COPS9Q8WXC6 57 aa1.21□□□□□ -2.22
GPNMB-205ENST00000463011 C2orf88Q9BSF0 95 aa1.21□□□□□ -2.22
GPNMB-205ENST00000463011 SNRNP25Q9BV90 132 aaKnown RBP1.21□□□□□ -2.22
GPNMB-205ENST00000463011 EML5Q05BV3 1969 aa1.21□□□□□ -2.22
GPNMB-205ENST00000463011 TECTAO75443 2155 aa1.2□□□□□ -2.22
GPNMB-205ENST00000463011 TRAV12-3A0A0B4J271 114 aa1.2□□□□□ -2.22
GPNMB-205ENST00000463011 SPAARA0A1B0GVQ0 90 aa1.2□□□□□ -2.22
GPNMB-205ENST00000463011 NDUFB6O95139 128 aa1.2□□□□□ -2.22
GPNMB-205ENST00000463011 NPC2P61916 151 aa1.2□□□□□ -2.22
GPNMB-205ENST00000463011 UBE2G1P62253 170 aa1.2□□□□□ -2.22
GPNMB-205ENST00000463011 ZNF56Q15929 161 aa1.2□□□□□ -2.22
GPNMB-205ENST00000463011 Q6ZS92 163 aa1.2□□□□□ -2.22
GPNMB-205ENST00000463011 CYP2G1PQ6ZSU1 146 aa1.2□□□□□ -2.22
GPNMB-205ENST00000463011 NDUFA11Q86Y39 141 aa1.2□□□□□ -2.22
GPNMB-205ENST00000463011 AGPAT4-IT1Q9H0P7 198 aa1.2□□□□□ -2.22
GPNMB-205ENST00000463011 NAIPQ13075 1403 aa1.2□□□□□ -2.22
GPNMB-205ENST00000463011 MYO18AQ92614 2054 aaKnown RBP1.19□□□□□ -2.22
GPNMB-205ENST00000463011 TEX49A0A1B0GTD5 131 aa1.19□□□□□ -2.22
GPNMB-205ENST00000463011 A6NIN4 97 aa1.19□□□□□ -2.22
GPNMB-205ENST00000463011 C9orf116Q5BN46 136 aaPredicted RBP1.19□□□□□ -2.22
GPNMB-205ENST00000463011 Q8N6K4 173 aa1.19□□□□□ -2.22
GPNMB-205ENST00000463011 C10orf82Q8WW14 230 aa1.19□□□□□ -2.22
GPNMB-205ENST00000463011 RERGLQ9H628 205 aa1.19□□□□□ -2.22
GPNMB-205ENST00000463011 KIF13AQ9H1H9 1805 aa1.19□□□□□ -2.22
GPNMB-205ENST00000463011 CFTRP13569 1480 aa1.18□□□□□ -2.22
GPNMB-205ENST00000463011 WDR7Q9Y4E6 1490 aa1.18□□□□□ -2.22
GPNMB-205ENST00000463011 BLMP54132 1417 aaPredicted RBP1.18□□□□□ -2.22
GPNMB-205ENST00000463011 A0A1W2PPM0 123 aa1.18□□□□□ -2.22
GPNMB-205ENST00000463011 AKAIN1P0CW23 69 aa1.18□□□□□ -2.22
GPNMB-205ENST00000463011 FGF7P21781 194 aa1.18□□□□□ -2.22
GPNMB-205ENST00000463011 LSM10Q969L4 123 aaKnown RBP1.18□□□□□ -2.22
GPNMB-205ENST00000463011 RPRMQ9NS64 109 aa1.18□□□□□ -2.22
GPNMB-205ENST00000463011 SERP1Q9Y6X1 66 aa1.18□□□□□ -2.22
GPNMB-205ENST00000463011 RREB1Q92766 1687 aa1.18□□□□□ -2.22
GPNMB-205ENST00000463011 CHD3Q12873 2000 aaKnown RBP1.18□□□□□ -2.22
GPNMB-205ENST00000463011 DLG5Q8TDM6 1919 aa1.17□□□□□ -2.22
GPNMB-205ENST00000463011 DAPK1P53355 1430 aa1.17□□□□□ -2.22
GPNMB-205ENST00000463011 SMG6Q86US8 1419 aaKnown RBP1.17□□□□□ -2.22
GPNMB-205ENST00000463011 SPTSSBQ8NFR3 76 aa1.17□□□□□ -2.22
GPNMB-205ENST00000463011 NAA60Q9H7X0 242 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms