RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 CLIP1P30622 1438 aa3.66□□□□□ -1.82
SGCE-209ENST00000462731 ABCA3Q99758 1704 aa3.66□□□□□ -1.82
SGCE-209ENST00000462731 MYLKQ15746 1914 aa3.66□□□□□ -1.82
SGCE-209ENST00000462731 ZSWIM8A7E2V4 1837 aa3.65□□□□□ -1.82
SGCE-209ENST00000462731 SBF2Q86WG5 1849 aa3.65□□□□□ -1.82
SGCE-209ENST00000462731 CPAMD8Q8IZJ3 1885 aa3.65□□□□□ -1.82
SGCE-209ENST00000462731 NAP1L6A6NFF2 107 aa3.65□□□□□ -1.83
SGCE-209ENST00000462731 NUPR1O60356 82 aa3.65□□□□□ -1.83
SGCE-209ENST00000462731 FAUP35544 74 aaKnown RBP3.65□□□□□ -1.83
SGCE-209ENST00000462731 Q5BKY6 102 aa3.65□□□□□ -1.83
SGCE-209ENST00000462731 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.65□□□□□ -1.83
SGCE-209ENST00000462731 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
SGCE-209ENST00000462731 CYP4F30PQ9H0H9 118 aa3.65□□□□□ -1.83
SGCE-209ENST00000462731 CYTL1Q9NRR1 136 aa3.65□□□□□ -1.83
SGCE-209ENST00000462731 SMARCA4P51532 1647 aa3.65□□□□□ -1.83
SGCE-209ENST00000462731 POLA1P09884 1462 aaPredicted RBP3.65□□□□□ -1.83
SGCE-209ENST00000462731 DIDO1Q9BTC0 2240 aaKnown RBP3.64□□□□□ -1.83
SGCE-209ENST00000462731 TRAV17A0A0B4J275 112 aa3.64□□□□□ -1.83
SGCE-209ENST00000462731 SEC11AP67812 179 aa3.64□□□□□ -1.83
SGCE-209ENST00000462731 ADIRFQ15847 76 aa3.64□□□□□ -1.83
SGCE-209ENST00000462731 LINC00474Q9P2X8 69 aa3.64□□□□□ -1.83
SGCE-209ENST00000462731 PSME4Q14997 1843 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 PXDNQ92626 1479 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 IGLV3-16A0A075B6K0 115 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 TRBV10-3A0A0K0K1G6 114 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 A0A1W2PNM2 257 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 H3BRM9 83 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 PDCD5O14737 125 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 NDUFC1O43677 76 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 GNG11P61952 73 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 Q6ZTI0 123 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 SERP2Q8N6R1 65 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 OR10AG1Q8NH19 301 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 TRGV9Q99603 122 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 ST20Q9HBF5 79 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 COL24A1Q17RW2 1714 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 CASZ1Q86V15 1759 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 NACAE9PAV3 2078 aa3.63□□□□□ -1.83
SGCE-209ENST00000462731 MGAMO43451 1857 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 GOLGA3Q08378 1498 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 ARHGEF12Q9NZN5 1544 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 TRAV13-2A0A0B4J235 113 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 CXorf51AA0A1B0GTR3 108 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 C2orf70A6NJV1 201 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 RNASE2P10153 161 aaKnown RBP3.62□□□□□ -1.83
SGCE-209ENST00000462731 DEFA5Q01523 94 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 PDE6HQ13956 83 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 NDUFA11Q86Y39 141 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 FAM213BQ8TBF2 198 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 CACFD1Q9UGQ2 172 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 PARP14Q460N5 1801 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 DOCK1Q14185 1865 aa3.62□□□□□ -1.83
SGCE-209ENST00000462731 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.61□□□□□ -1.83
SGCE-209ENST00000462731 PRR14LQ5THK1 2151 aa3.61□□□□□ -1.83
SGCE-209ENST00000462731 LAMC3Q9Y6N6 1575 aa3.61□□□□□ -1.83
SGCE-209ENST00000462731 CCL16O15467 120 aa3.61□□□□□ -1.83
SGCE-209ENST00000462731 IGHV3-33P01772 117 aa3.61□□□□□ -1.83
SGCE-209ENST00000462731 DSCR10P59022 87 aa3.61□□□□□ -1.83
SGCE-209ENST00000462731 CLECL1Q8IZS7 167 aa3.61□□□□□ -1.83
SGCE-209ENST00000462731 RPS10P5Q9NQ39 176 aa3.61□□□□□ -1.83
SGCE-209ENST00000462731 C22orf24Q9Y442 160 aa3.61□□□□□ -1.83
SGCE-209ENST00000462731 TOPAZ1Q8N9V7 1692 aa3.61□□□□□ -1.83
SGCE-209ENST00000462731 PCNX2A6NKB5 2137 aa3.6□□□□□ -1.83
SGCE-209ENST00000462731 HCG22E2RYF7 251 aa3.6□□□□□ -1.83
SGCE-209ENST00000462731 FREM3P0C091 2139 aa3.6□□□□□ -1.83
SGCE-209ENST00000462731 HRES1P13985 223 aa3.6□□□□□ -1.83
SGCE-209ENST00000462731 CNBPP62633 177 aaKnown RBP3.6□□□□□ -1.83
SGCE-209ENST00000462731 MPV17LQ2QL34 196 aa3.6□□□□□ -1.83
SGCE-209ENST00000462731 SPTSSBQ8NFR3 76 aa3.6□□□□□ -1.83
SGCE-209ENST00000462731 CDC42SE1Q9NRR8 79 aa3.6□□□□□ -1.83
SGCE-209ENST00000462731 PTPRMP28827 1452 aa3.6□□□□□ -1.83
SGCE-209ENST00000462731 SNRNP200O75643 2136 aaKnown RBP3.59□□□□□ -1.83
SGCE-209ENST00000462731 KIAA2026Q5HYC2 2103 aa3.59□□□□□ -1.83
SGCE-209ENST00000462731 IGFBP7Q16270 282 aa3.59□□□□□ -1.83
SGCE-209ENST00000462731 LCE1AQ5T7P2 110 aa3.59□□□□□ -1.83
SGCE-209ENST00000462731 Q8N9L7 120 aa3.59□□□□□ -1.83
SGCE-209ENST00000462731 C4orf3Q8WVX3 66 aa3.59□□□□□ -1.83
SGCE-209ENST00000462731 SPCS1Q9Y6A9 102 aa3.59□□□□□ -1.83
SGCE-209ENST00000462731 COL2A1P02458 1487 aaPredicted RBP3.59□□□□□ -1.84
SGCE-209ENST00000462731 PPLO60437 1756 aa3.58□□□□□ -1.84
SGCE-209ENST00000462731 STRCQ7RTU9 1775 aa3.58□□□□□ -1.84
SGCE-209ENST00000462731 TRBV7-1A0A0A6YYK4 115 aa3.58□□□□□ -1.84
SGCE-209ENST00000462731 SIX6O95475 246 aa3.58□□□□□ -1.84
SGCE-209ENST00000462731 LYPD1Q8N2G4 141 aa3.58□□□□□ -1.84
SGCE-209ENST00000462731 CCL26Q9Y258 94 aa3.58□□□□□ -1.84
SGCE-209ENST00000462731 FANCAO15360 1455 aa3.58□□□□□ -1.84
SGCE-209ENST00000462731 ADAMTS12P58397 1594 aa3.58□□□□□ -1.84
SGCE-209ENST00000462731 PLXNA2O75051 1894 aa3.58□□□□□ -1.84
SGCE-209ENST00000462731 TMEM30CPA0ZSE6 113 aa3.57□□□□□ -1.84
SGCE-209ENST00000462731 CRYM-AS1A6NIL9 109 aa3.57□□□□□ -1.84
SGCE-209ENST00000462731 LRP5O75197 1615 aa3.57□□□□□ -1.84
SGCE-209ENST00000462731 ANK1P16157 1881 aa3.57□□□□□ -1.84
SGCE-209ENST00000462731 C1orf137Q5JT78 98 aa3.57□□□□□ -1.84
SGCE-209ENST00000462731 DISP1Q96F81 1524 aa3.57□□□□□ -1.84
SGCE-209ENST00000462731 EML5Q05BV3 1969 aa3.56□□□□□ -1.84
SGCE-209ENST00000462731 CCDC180Q9P1Z9 1646 aa3.56□□□□□ -1.84
SGCE-209ENST00000462731 CDK12Q9NYV4 1490 aaPredicted RBP3.56□□□□□ -1.84
SGCE-209ENST00000462731 IGLV4-60A0A075B6I1 120 aa3.56□□□□□ -1.84
SGCE-209ENST00000462731 A0A1W2PPM0 123 aa3.56□□□□□ -1.84
SGCE-209ENST00000462731 SYS1-DBNDD2H3BUS1 97 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms