RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 VWFP04275 2813 aa3.38□□□□□ -1.87
CSMD3-205ENST00000462254 IGKV3-7A0A075B6H7 116 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 TRAV8-2A0A0B4J237 113 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 A0A1B0GUV1 79 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 A0A1W2PRE2 83 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 IZUMO1RA6ND01 250 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 C9JQL5 133 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 C11orf94C9JXX5 98 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 F5H768 121 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 M0R3E3 92 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 ZNF253O75346 499 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 IFNA1P01562 189 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 CD5P06127 495 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 SRP19P09132 144 aaKnown RBP3.37□□□□□ -1.87
CSMD3-205ENST00000462254 S100A7P31151 101 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 RANP62826 216 aaKnown RBP3.37□□□□□ -1.87
CSMD3-205ENST00000462254 MEF2BQ02080 365 aaPredicted RBP3.37□□□□□ -1.87
CSMD3-205ENST00000462254 PDE6HQ13956 83 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 DEFB114Q30KQ6 69 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 TMEM61Q8N0U2 210 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 EXOC3-AS1Q8N2X6 119 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 FAM24BQ8N5W8 94 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 EIF4E3Q8N5X7 224 aaKnown RBP3.37□□□□□ -1.87
CSMD3-205ENST00000462254 C3orf56Q8N813 242 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 CSNK1G2-AS1Q8NCQ2 148 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 RXFP4Q8TDU9 374 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 DCANP1Q8TF63 244 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 CHCHD5Q9BSY4 110 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 EIF5A2Q9GZV4 153 aaKnown RBP3.37□□□□□ -1.87
CSMD3-205ENST00000462254 Q9H3A6 140 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 ZNF331Q9NQX6 463 aaPredicted RBP3.37□□□□□ -1.87
CSMD3-205ENST00000462254 ARL2-SNX15V9GYD0 113 aa3.37□□□□□ -1.87
CSMD3-205ENST00000462254 STAB1Q9NY15 2570 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 FAM240AA0A1B0GVK7 77 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 PGPA6NDG6 321 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 IFITM10A6NMD0 228 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 IGLV1-51P01701 117 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 SLC25A5P05141 298 aaKnown RBP3.36□□□□□ -1.87
CSMD3-205ENST00000462254 ADCYAP1P18509 176 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 DEFB1P60022 68 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 GNG5P63218 68 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 PRR4Q16378 134 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 LYPD1Q8N2G4 141 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 RNF182Q8N6D2 247 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 CYB561D1Q8N8Q1 229 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 NKAPP1Q8N9T2 125 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 DYNLRB2Q8TF09 96 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 PACRGQ96M98 296 aaPredicted RBP3.36□□□□□ -1.87
CSMD3-205ENST00000462254 SLC50A1Q9BRV3 221 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 DERL1Q9BUN8 251 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 MS4A6AQ9H2W1 248 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 OTORQ9NRC9 128 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 VAX2Q9UIW0 290 aa3.36□□□□□ -1.87
CSMD3-205ENST00000462254 TRBV20OR9-2A0A075B6H5 130 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 IGKV2-40A0A087WW87 121 aaPredicted RBP3.35□□□□□ -1.87
CSMD3-205ENST00000462254 ZNF705FA8MVS1 300 aaPredicted RBP3.35□□□□□ -1.87
CSMD3-205ENST00000462254 TMEM250H0YL14 139 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 H7C1H1 209 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 SNAPINO95295 136 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 IGKV2D-40P01614 121 aaPredicted RBP3.35□□□□□ -1.87
CSMD3-205ENST00000462254 ZNF688P0C7X2 276 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 MEOX2P50222 304 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 RIPPLY3P57055 190 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 ERVFC1-1P60608 527 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 PSG9Q00887 426 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 PEA15Q15121 130 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 NOTCH2NLQ7Z3S9 236 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 C5orf17Q8NAS9 161 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 WFDC9Q8NEX5 89 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 OR10J6PQ8NGY7 276 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 LINC00052Q96N35 136 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 KIR2DL4Q99706 377 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 TXNDC17Q9BRA2 123 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 EPDR1Q9UM22 224 aa3.35□□□□□ -1.87
CSMD3-205ENST00000462254 CMYA5Q8N3K9 4069 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 A0A087X002 238 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 TRAV8-1A0A0A6YYK1 113 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 TRAV2A0A0B4J234 112 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 IGHV3OR16-9A0A0B4J2B5 98 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 TMEM218A2RU14 115 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 F6UZH7 168 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 DNASE2O00115 360 aaPredicted RBP3.34□□□□□ -1.87
CSMD3-205ENST00000462254 PEX7O00628 323 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 ISLRO14498 428 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 PDE6DO43924 150 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 IGLV2-11P01706 119 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 TCRAP04437 139 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 CD7P09564 240 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 SFTA3P0C7M3 94 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 ZNF705DP0CH99 300 aaPredicted RBP3.34□□□□□ -1.87
CSMD3-205ENST00000462254 ZNF705BP0CI00 300 aaPredicted RBP3.34□□□□□ -1.87
CSMD3-205ENST00000462254 AKR1C3P42330 323 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 INSL3P51460 131 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 PRR3P79522 188 aaKnown RBP3.34□□□□□ -1.87
CSMD3-205ENST00000462254 S100A12P80511 92 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 GDF5OSQ5U4N7 250 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 LCN12Q6JVE5 192 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 GOLT1AQ6ZVE7 132 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 Q6ZVH6 145 aa3.34□□□□□ -1.87
CSMD3-205ENST00000462254 ZFP82Q8N141 532 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms