RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 FER1L6-AS1Q8NA97 138 aa11.21□□□□□ -0.61
SF3A3-203ENST00000461869 NUP35Q8NFH5 326 aa11.21□□□□□ -0.61
SF3A3-203ENST00000461869 CSTL1Q9H114 145 aa11.21□□□□□ -0.61
SF3A3-203ENST00000461869 AGRNO00468 2067 aa11.21□□□□□ -0.62
SF3A3-203ENST00000461869 TRAV12-2A0A075B6T6 113 aa11.2□□□□□ -0.62
SF3A3-203ENST00000461869 IGKV3D-20A0A0C4DH25 116 aa11.2□□□□□ -0.62
SF3A3-203ENST00000461869 F2Z2F3 143 aa11.2□□□□□ -0.62
SF3A3-203ENST00000461869 ZNF324O75467 553 aaPredicted RBP11.2□□□□□ -0.62
SF3A3-203ENST00000461869 GZMBP10144 247 aa11.2□□□□□ -0.62
SF3A3-203ENST00000461869 ASIPP42127 132 aa11.2□□□□□ -0.62
SF3A3-203ENST00000461869 KIR3DS1Q14943 382 aa11.2□□□□□ -0.62
SF3A3-203ENST00000461869 TDRG1Q3Y452 100 aa11.2□□□□□ -0.62
SF3A3-203ENST00000461869 TMEM256Q8N2U0 113 aa11.2□□□□□ -0.62
SF3A3-203ENST00000461869 GTSF1Q8WW33 167 aa11.2□□□□□ -0.62
SF3A3-203ENST00000461869 C11orf21Q9P2W6 132 aa11.2□□□□□ -0.62
SF3A3-203ENST00000461869 A0A1B0GW15 77 aa11.19□□□□□ -0.62
SF3A3-203ENST00000461869 CRXO43186 299 aaPredicted RBP11.19□□□□□ -0.62
SF3A3-203ENST00000461869 S100A8P05109 93 aa11.19□□□□□ -0.62
SF3A3-203ENST00000461869 IGLC6P0CF74 106 aa11.19□□□□□ -0.62
SF3A3-203ENST00000461869 MED14OSP0DP75 135 aa11.19□□□□□ -0.62
SF3A3-203ENST00000461869 S100A4P26447 101 aaKnown RBP11.19□□□□□ -0.62
SF3A3-203ENST00000461869 CTRLP40313 264 aa11.19□□□□□ -0.62
SF3A3-203ENST00000461869 FXYD7P58549 80 aa11.19□□□□□ -0.62
SF3A3-203ENST00000461869 ANXA2RQ3ZCQ2 193 aa11.19□□□□□ -0.62
SF3A3-203ENST00000461869 DNLZQ5SXM8 178 aa11.19□□□□□ -0.62
SF3A3-203ENST00000461869 WDR73Q6P4I2 378 aa11.19□□□□□ -0.62
SF3A3-203ENST00000461869 PGLYRP4Q96LB8 373 aa11.19□□□□□ -0.62
SF3A3-203ENST00000461869 DNAH10Q8IVF4 4471 aa11.19□□□□□ -0.62
SF3A3-203ENST00000461869 TRGV11A0A075B6L2 103 aa11.18□□□□□ -0.62
SF3A3-203ENST00000461869 IGHV1OR15-1A0A075B7D0 117 aa11.18□□□□□ -0.62
SF3A3-203ENST00000461869 A0A1B0GUT8 65 aa11.18□□□□□ -0.62
SF3A3-203ENST00000461869 RIGQ13278 110 aa11.18□□□□□ -0.62
SF3A3-203ENST00000461869 MUC21Q5SSG8 566 aa11.18□□□□□ -0.62
SF3A3-203ENST00000461869 OR11H2Q8NH07 326 aa11.18□□□□□ -0.62
SF3A3-203ENST00000461869 LINC00467Q9BRT7 94 aa11.18□□□□□ -0.62
SF3A3-203ENST00000461869 TPPP3Q9BW30 176 aa11.18□□□□□ -0.62
SF3A3-203ENST00000461869 C11orf68Q9H3H3 251 aaKnown RBP11.18□□□□□ -0.62
SF3A3-203ENST00000461869 GRIFINA4D1Z8 144 aa11.17□□□□□ -0.62
SF3A3-203ENST00000461869 MT-ND6P03923 174 aa11.17□□□□□ -0.62
SF3A3-203ENST00000461869 OR5AL1P0C617 328 aa11.17□□□□□ -0.62
SF3A3-203ENST00000461869 TCTAP57738 103 aa11.17□□□□□ -0.62
SF3A3-203ENST00000461869 HBBP68871 147 aa11.17□□□□□ -0.62
SF3A3-203ENST00000461869 DEFB4AO15263 64 aa11.16□□□□□ -0.62
SF3A3-203ENST00000461869 SNAI2O43623 268 aa11.16□□□□□ -0.62
SF3A3-203ENST00000461869 RPS10P46783 165 aaKnown RBP11.16□□□□□ -0.62
SF3A3-203ENST00000461869 MRPL54Q6P161 138 aaKnown RBP11.16□□□□□ -0.62
SF3A3-203ENST00000461869 LYZL1Q6UWQ5 148 aa11.16□□□□□ -0.62
SF3A3-203ENST00000461869 TMEM208Q9BTX3 173 aa11.16□□□□□ -0.62
SF3A3-203ENST00000461869 CNFNQ9BYD5 112 aa11.16□□□□□ -0.62
SF3A3-203ENST00000461869 XCL2Q9UBD3 114 aa11.16□□□□□ -0.62
SF3A3-203ENST00000461869 GOLT1BQ9Y3E0 138 aa11.16□□□□□ -0.62
SF3A3-203ENST00000461869 KIAA1109Q2LD37 5005 aa11.16□□□□□ -0.62
SF3A3-203ENST00000461869 A0A1B0GXF2 115 aa11.15□□□□□ -0.62
SF3A3-203ENST00000461869 IGLL5B9A064 214 aa11.15□□□□□ -0.62
SF3A3-203ENST00000461869 SPINK4O60575 86 aa11.15□□□□□ -0.62
SF3A3-203ENST00000461869 CACNG7P62955 275 aa11.15□□□□□ -0.62
SF3A3-203ENST00000461869 Q6ZQT7 251 aa11.15□□□□□ -0.62
SF3A3-203ENST00000461869 SSBP4Q9BWG4 385 aaPredicted RBP11.15□□□□□ -0.62
SF3A3-203ENST00000461869 GNB1LQ9BYB4 327 aa11.15□□□□□ -0.62
SF3A3-203ENST00000461869 CBY3A6NI87 242 aa11.14□□□□□ -0.63
SF3A3-203ENST00000461869 H3BVH4 76 aa11.14□□□□□ -0.63
SF3A3-203ENST00000461869 HLA-DQA1P01909 254 aa11.14□□□□□ -0.63
SF3A3-203ENST00000461869 ARMS2P0C7Q2 107 aa11.14□□□□□ -0.63
SF3A3-203ENST00000461869 LINC01587Q99440 93 aa11.14□□□□□ -0.63
SF3A3-203ENST00000461869 APLNQ9ULZ1 77 aa11.14□□□□□ -0.63
SF3A3-203ENST00000461869 HECTD4Q9Y4D8 3996 aa11.14□□□□□ -0.63
SF3A3-203ENST00000461869 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
SF3A3-203ENST00000461869 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
SF3A3-203ENST00000461869 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
SF3A3-203ENST00000461869 ZNF575Q86XF7 245 aa11.13□□□□□ -0.63
SF3A3-203ENST00000461869 PHLDA3Q9Y5J5 127 aa11.13□□□□□ -0.63
SF3A3-203ENST00000461869 C1orf196B1AJZ1 125 aa11.12□□□□□ -0.63
SF3A3-203ENST00000461869 SNURFLB1AK76 121 aa11.12□□□□□ -0.63
SF3A3-203ENST00000461869 RAB4BP61018 213 aa11.12□□□□□ -0.63
SF3A3-203ENST00000461869 ZNF415Q09FC8 603 aa11.12□□□□□ -0.63
SF3A3-203ENST00000461869 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
SF3A3-203ENST00000461869 SCRT2Q9NQ03 307 aa11.12□□□□□ -0.63
SF3A3-203ENST00000461869 TRAPPC1Q9Y5R8 145 aa11.12□□□□□ -0.63
SF3A3-203ENST00000461869 VPS13DQ5THJ4 4388 aa11.12□□□□□ -0.63
SF3A3-203ENST00000461869 IGHV4-4A0A075B6R2 117 aa11.11□□□□□ -0.63
SF3A3-203ENST00000461869 IGHV3-16A0A0C4DH30 117 aa11.11□□□□□ -0.63
SF3A3-203ENST00000461869 GNRH2O43555 120 aa11.11□□□□□ -0.63
SF3A3-203ENST00000461869 GIG44P09565 113 aaPredicted RBP11.11□□□□□ -0.63
SF3A3-203ENST00000461869 RNASE3P12724 160 aaKnown RBP11.11□□□□□ -0.63
SF3A3-203ENST00000461869 CAMPP49913 170 aa11.11□□□□□ -0.63
SF3A3-203ENST00000461869 TWIST1Q15672 202 aa11.11□□□□□ -0.63
SF3A3-203ENST00000461869 TMEM136Q6ZRR5 245 aa11.11□□□□□ -0.63
SF3A3-203ENST00000461869 LINC00336Q6ZUF6 198 aa11.11□□□□□ -0.63
SF3A3-203ENST00000461869 SMIM15Q7Z3B0 74 aa11.11□□□□□ -0.63
SF3A3-203ENST00000461869 ZFP82Q8N141 532 aa11.11□□□□□ -0.63
SF3A3-203ENST00000461869 GATD1Q8NB37 220 aa11.11□□□□□ -0.63
SF3A3-203ENST00000461869 SYT8Q8NBV8 401 aa11.11□□□□□ -0.63
SF3A3-203ENST00000461869 FRZBQ92765 325 aa11.11□□□□□ -0.63
SF3A3-203ENST00000461869 RAB5BP61020 215 aa11.1□□□□□ -0.63
SF3A3-203ENST00000461869 C1orf158Q8N1D5 194 aa11.1□□□□□ -0.63
SF3A3-203ENST00000461869 OR10AG1Q8NH19 301 aa11.1□□□□□ -0.63
SF3A3-203ENST00000461869 C9orf85Q96MD7 179 aa11.1□□□□□ -0.63
SF3A3-203ENST00000461869 TP53TG3Q9ULZ0 132 aa11.1□□□□□ -0.63
SF3A3-203ENST00000461869 TIMM8BQ9Y5J9 83 aaPredicted RBP11.1□□□□□ -0.63
SF3A3-203ENST00000461869 NXPH4O95158 308 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms