RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 SH3BGRL3Q9H299 93 aa11.97□□□□□ -0.49
SSB-206ENST00000461708 TNFSF18Q9UNG2 199 aa11.97□□□□□ -0.49
SSB-206ENST00000461708 ALG5Q9Y673 324 aa11.97□□□□□ -0.49
SSB-206ENST00000461708 VPS13BQ7Z7G8 4022 aa11.96□□□□□ -0.49
SSB-206ENST00000461708 GGTLC3B5MD39 225 aa11.96□□□□□ -0.49
SSB-206ENST00000461708 SUMO1P63165 101 aaKnown RBP11.96□□□□□ -0.49
SSB-206ENST00000461708 LAGE3Q14657 143 aa11.96□□□□□ -0.49
SSB-206ENST00000461708 OR10J3Q5JRS4 329 aa11.96□□□□□ -0.49
SSB-206ENST00000461708 ZNF506Q5JVG8 444 aa11.96□□□□□ -0.49
SSB-206ENST00000461708 ACTR3CQ9C0K3 210 aaPredicted RBP11.96□□□□□ -0.49
SSB-206ENST00000461708 GTSF1LQ9H1H1 148 aa11.96□□□□□ -0.49
SSB-206ENST00000461708 IGLV5-52A0A0A0MRZ9 124 aa11.95□□□□□ -0.5
SSB-206ENST00000461708 A0A1W2PRE2 83 aa11.95□□□□□ -0.5
SSB-206ENST00000461708 PGPEP1LA6NFU8 196 aa11.95□□□□□ -0.5
SSB-206ENST00000461708 RNASE3P12724 160 aaKnown RBP11.95□□□□□ -0.5
SSB-206ENST00000461708 ZFP2Q6ZN57 461 aa11.95□□□□□ -0.5
SSB-206ENST00000461708 ATP6V0E2Q8NHE4 81 aa11.95□□□□□ -0.5
SSB-206ENST00000461708 PRNTQ86SH4 94 aa11.94□□□□□ -0.5
SSB-206ENST00000461708 Q8N814 137 aa11.94□□□□□ -0.5
SSB-206ENST00000461708 A8MWV9 139 aa11.93□□□□□ -0.5
SSB-206ENST00000461708 IGHV3-73A0A0B4J1V6 119 aa11.92□□□□□ -0.5
SSB-206ENST00000461708 PTTG1O95997 202 aa11.92□□□□□ -0.5
SSB-206ENST00000461708 C1QBP02746 253 aa11.92□□□□□ -0.5
SSB-206ENST00000461708 TM2D2Q9BX73 214 aa11.92□□□□□ -0.5
SSB-206ENST00000461708 MED28Q9H204 178 aa11.92□□□□□ -0.5
SSB-206ENST00000461708 Q9HAA7 133 aa11.92□□□□□ -0.5
SSB-206ENST00000461708 FABP5P3A8MUU1 101 aa11.91□□□□□ -0.5
SSB-206ENST00000461708 FAM229AH3BQW9 127 aa11.91□□□□□ -0.5
SSB-206ENST00000461708 LINC00694P0DN24 101 aa11.91□□□□□ -0.5
SSB-206ENST00000461708 NKX6-2Q9C056 277 aaPredicted RBP11.91□□□□□ -0.5
SSB-206ENST00000461708 PARLQ9H300 379 aa11.91□□□□□ -0.5
SSB-206ENST00000461708 MYCBP2O75592 4640 aa11.91□□□□□ -0.5
SSB-206ENST00000461708 IGKV3D-20A0A0C4DH25 116 aa11.9□□□□□ -0.5
SSB-206ENST00000461708 IGHV3-30P01768 117 aa11.9□□□□□ -0.5
SSB-206ENST00000461708 IGHV3-33P01772 117 aa11.9□□□□□ -0.5
SSB-206ENST00000461708 IGHV3-30-3P0DP02 117 aa11.9□□□□□ -0.5
SSB-206ENST00000461708 IGHV3-30-5P0DP03 117 aa11.9□□□□□ -0.5
SSB-206ENST00000461708 INO80EQ8NBZ0 244 aaPredicted RBP11.9□□□□□ -0.5
SSB-206ENST00000461708 IL36BQ9NZH7 164 aa11.9□□□□□ -0.5
SSB-206ENST00000461708 A0A087WWC5 75 aa11.89□□□□□ -0.51
SSB-206ENST00000461708 TRAV8-3A0A0A6YYJ7 113 aa11.89□□□□□ -0.51
SSB-206ENST00000461708 SMR3BP02814 79 aaPredicted RBP11.89□□□□□ -0.51
SSB-206ENST00000461708 GIPP09681 153 aaPredicted RBP11.89□□□□□ -0.51
SSB-206ENST00000461708 S100A4P26447 101 aaKnown RBP11.89□□□□□ -0.51
SSB-206ENST00000461708 DNLZQ5SXM8 178 aa11.89□□□□□ -0.51
SSB-206ENST00000461708 Q6ZSN1 163 aa11.89□□□□□ -0.51
SSB-206ENST00000461708 COX8CQ7Z4L0 72 aa11.89□□□□□ -0.51
SSB-206ENST00000461708 LINC00479Q96M42 142 aa11.89□□□□□ -0.51
SSB-206ENST00000461708 ARL2-SNX15V9GYD0 113 aa11.89□□□□□ -0.51
SSB-206ENST00000461708 BORCS7-ASMTA0A0B4J1R7 106 aa11.88□□□□□ -0.51
SSB-206ENST00000461708 CTXND1A0A1B0GTU2 59 aa11.88□□□□□ -0.51
SSB-206ENST00000461708 ASIPP42127 132 aa11.88□□□□□ -0.51
SSB-206ENST00000461708 FGF8P55075 233 aaPredicted RBP11.88□□□□□ -0.51
SSB-206ENST00000461708 TOR2AQ5JU69 321 aa11.88□□□□□ -0.51
SSB-206ENST00000461708 UFSP1Q6NVU6 142 aa11.88□□□□□ -0.51
SSB-206ENST00000461708 HIST1H2BAQ96A08 127 aa11.88□□□□□ -0.51
SSB-206ENST00000461708 BATF3Q9NR55 127 aa11.88□□□□□ -0.51
SSB-206ENST00000461708 PEX7O00628 323 aa11.87□□□□□ -0.51
SSB-206ENST00000461708 IFNA7P01567 189 aa11.87□□□□□ -0.51
SSB-206ENST00000461708 LGALSLQ3ZCW2 172 aaPredicted RBP11.87□□□□□ -0.51
SSB-206ENST00000461708 Q5BKY6 102 aa11.87□□□□□ -0.51
SSB-206ENST00000461708 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
SSB-206ENST00000461708 TRAV34A0A0B4J273 112 aa11.86□□□□□ -0.51
SSB-206ENST00000461708 RNF222A6NCQ9 220 aa11.86□□□□□ -0.51
SSB-206ENST00000461708 RHODO00212 210 aa11.86□□□□□ -0.51
SSB-206ENST00000461708 ZNF726P1Q15940 193 aa11.86□□□□□ -0.51
SSB-206ENST00000461708 Q86TA4 180 aa11.86□□□□□ -0.51
SSB-206ENST00000461708 ZFP30Q9Y2G7 519 aa11.86□□□□□ -0.51
SSB-206ENST00000461708 COX11Q9Y6N1 276 aa11.86□□□□□ -0.51
SSB-206ENST00000461708 GAGE12JA6NER3 117 aa11.85□□□□□ -0.51
SSB-206ENST00000461708 B4DEV8 164 aa11.85□□□□□ -0.51
SSB-206ENST00000461708 GAGE1Q13065 139 aa11.85□□□□□ -0.51
SSB-206ENST00000461708 GAGE4Q13068 117 aa11.85□□□□□ -0.51
SSB-206ENST00000461708 GAGE5Q13069 117 aa11.85□□□□□ -0.51
SSB-206ENST00000461708 GAGE13Q4V321 117 aa11.85□□□□□ -0.51
SSB-206ENST00000461708 SYT8Q8NBV8 401 aa11.85□□□□□ -0.51
SSB-206ENST00000461708 FAM74A7A6NL05 159 aa11.84□□□□□ -0.51
SSB-206ENST00000461708 KRBOX1C9JBD0 128 aa11.84□□□□□ -0.51
SSB-206ENST00000461708 CRIP1P50238 77 aa11.84□□□□□ -0.51
SSB-206ENST00000461708 Q6ZSA8 131 aa11.84□□□□□ -0.51
SSB-206ENST00000461708 OR2T35Q8NGX2 323 aa11.84□□□□□ -0.51
SSB-206ENST00000461708 TCEAL7Q9BRU2 100 aa11.84□□□□□ -0.51
SSB-206ENST00000461708 SEC11BP0C7V7 166 aa11.83□□□□□ -0.52
SSB-206ENST00000461708 DMRTA1Q5VZB9 504 aa11.83□□□□□ -0.52
SSB-206ENST00000461708 Q8N3U1 123 aa11.83□□□□□ -0.52
SSB-206ENST00000461708 C14orf178Q8N769 122 aaPredicted RBP11.83□□□□□ -0.52
SSB-206ENST00000461708 SAMD10Q9BYL1 202 aa11.83□□□□□ -0.52
SSB-206ENST00000461708 JPT2Q9H910 190 aa11.83□□□□□ -0.52
SSB-206ENST00000461708 FAM30AQ9NZY2 134 aa11.83□□□□□ -0.52
SSB-206ENST00000461708 TRBV6-1A0A0K0K1D8 114 aa11.82□□□□□ -0.52
SSB-206ENST00000461708 H3BVH4 76 aa11.82□□□□□ -0.52
SSB-206ENST00000461708 ARMS2P0C7Q2 107 aa11.82□□□□□ -0.52
SSB-206ENST00000461708 UBE2G2P60604 165 aa11.82□□□□□ -0.52
SSB-206ENST00000461708 WFDC2Q14508 124 aa11.82□□□□□ -0.52
SSB-206ENST00000461708 AKR1C8PQ5T2L2 129 aa11.82□□□□□ -0.52
SSB-206ENST00000461708 FAM162BQ5T6X4 162 aa11.82□□□□□ -0.52
SSB-206ENST00000461708 DAZ4Q86SG3 579 aaKnown RBP11.82□□□□□ -0.52
SSB-206ENST00000461708 OR11H4Q8NGC9 324 aa11.82□□□□□ -0.52
SSB-206ENST00000461708 ZC2HC1AQ96GY0 325 aa11.82□□□□□ -0.52
SSB-206ENST00000461708 FMC1Q96HJ9 113 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms