RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 TPRKBQ9Y3C4 175 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 TRPM2O94759 1503 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 LMTK2Q8IWU2 1503 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 EHBP1L1Q8N3D4 1523 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 DUOX2Q9NRD8 1548 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 RALGAPBQ86X10 1494 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 TNS1Q9HBL0 1735 aaKnown RBP0.98□□□□□ -2.25
HDAC6-212ENST00000461608 CEP162Q5TB80 1403 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 TNS3Q68CZ2 1445 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 SMG6Q86US8 1419 aaKnown RBP0.98□□□□□ -2.25
HDAC6-212ENST00000461608 ERBINQ96RT1 1412 aa0.98□□□□□ -2.25
HDAC6-212ENST00000461608 CROCC2H7BZ55 1655 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 PLCH1Q4KWH8 1693 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 RREB1Q92766 1687 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 INTS1Q8N201 2190 aaKnown RBP0.97□□□□□ -2.25
HDAC6-212ENST00000461608 IQGAP3Q86VI3 1631 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 SBF1O95248 1867 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 ADGRB2O60241 1585 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 MYOFQ9NZM1 2061 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 C3orf85A0A1B0GTC6 90 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 hDV103S1A0JD37 113 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 CCL25O15444 150 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 LYRM1O43325 122 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 PITX3O75364 302 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 TRACP01848 142 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 PYYP10082 97 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 HIST1H1BP16401 226 aaKnown RBP0.97□□□□□ -2.25
HDAC6-212ENST00000461608 CKS2P33552 79 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 ZNF93P35789 620 aaPredicted RBP0.97□□□□□ -2.25
HDAC6-212ENST00000461608 CNBPP62633 177 aaKnown RBP0.97□□□□□ -2.25
HDAC6-212ENST00000461608 MRPS10P82664 201 aaKnown RBP0.97□□□□□ -2.25
HDAC6-212ENST00000461608 C2orf82Q6UX34 121 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 DEFB132Q7Z7B7 95 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 KCNRGQ8N5I3 272 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 OR5AK2Q8NH90 309 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 OTOSQ8NHW6 89 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 PP6455Q8WZ26 134 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 PPP3R2Q96LZ3 170 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 HYLS1Q96M11 299 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 MCEEQ96PE7 176 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 PSMG3Q9BT73 122 aaPredicted RBP0.97□□□□□ -2.25
HDAC6-212ENST00000461608 TMEM191AQ9H0A3 160 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 TAS2R8Q9NYW2 309 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 BOKQ9UMX3 212 aaPredicted RBP0.97□□□□□ -2.25
HDAC6-212ENST00000461608 NEXMIFQ5QGS0 1516 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 DLC1Q96QB1 1528 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 RGPD3A6NKT7 1758 aaPredicted RBP0.97□□□□□ -2.25
HDAC6-212ENST00000461608 RGPD4Q7Z3J3 1758 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 NUP188Q5SRE5 1749 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 MYOM2P54296 1465 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 C1orf167Q5SNV9 1468 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 DENND4CQ5VZ89 1909 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 USP32Q8NFA0 1604 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 NRXN3Q9Y4C0 1643 aa0.97□□□□□ -2.25
HDAC6-212ENST00000461608 HEATR5BQ9P2D3 2071 aa0.96□□□□□ -2.25
HDAC6-212ENST00000461608 SBF2Q86WG5 1849 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 RGPD8O14715 1765 aaPredicted RBP0.96□□□□□ -2.26
HDAC6-212ENST00000461608 N4BP2Q86UW6 1770 aaPredicted RBP0.96□□□□□ -2.26
HDAC6-212ENST00000461608 CASZ1Q86V15 1759 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 COL24A1Q17RW2 1714 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 NRAPQ86VF7 1730 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 ABCA3Q99758 1704 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 TRBV20-1A0A075B6N2 111 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 IGHV1-24A0A0C4DH33 117 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 LOC107986453A0A1B0GWG9 222 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 ZNF736B4DX44 427 aaPredicted RBP0.96□□□□□ -2.26
HDAC6-212ENST00000461608 C17orf112F2Z3M2 114 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 INE1O15225 51 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 NCR2O95944 276 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 TFF1P04155 84 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 LSM3P62310 102 aaKnown RBP0.96□□□□□ -2.26
HDAC6-212ENST00000461608 PPP3R1P63098 170 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 CDK6Q00534 326 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 CATR1Q13166 79 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 NCMAPQ5T1S8 102 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 Q6ZUT4 128 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 OR5AS1Q8N127 324 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 FAM19A2Q8N3H0 131 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 OR10AC1Q8NH08 325 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 CCL4L1Q8NHW4 92 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 SLC35B3Q9H1N7 401 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 ADGRL2O95490 1459 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 PXDNQ92626 1479 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 E9PCH4 1651 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 KIF1AQ12756 1690 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 KDM6AO15550 1401 aaPredicted RBP0.96□□□□□ -2.26
HDAC6-212ENST00000461608 MYOM3Q5VTT5 1437 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 MICAL3Q7RTP6 2002 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 COL14A1Q05707 1796 aaKnown RBP0.96□□□□□ -2.26
HDAC6-212ENST00000461608 CDC42BPGQ6DT37 1551 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 NRKQ7Z2Y5 1582 aa0.96□□□□□ -2.26
HDAC6-212ENST00000461608 QSER1Q2KHR3 1735 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 KNDC1Q76NI1 1749 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 ARHGEF28Q8N1W1 1705 aaKnown RBP0.95□□□□□ -2.26
HDAC6-212ENST00000461608 FMN2Q9NZ56 1722 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 PARP4Q9UKK3 1724 aaKnown RBP0.95□□□□□ -2.26
HDAC6-212ENST00000461608 NUP210Q8TEM1 1887 aaPredicted RBP0.95□□□□□ -2.26
HDAC6-212ENST00000461608 MYO5AQ9Y4I1 1855 aaKnown RBP0.95□□□□□ -2.26
HDAC6-212ENST00000461608 MYOM1P52179 1685 aa0.95□□□□□ -2.26
HDAC6-212ENST00000461608 TAF1LQ8IZX4 1826 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms