RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 LINC00614P0C842 121 aa5.05□□□□□ -1.6
MSH2-204ENST00000461394 ESDP10768 282 aa5.05□□□□□ -1.6
MSH2-204ENST00000461394 CMC4P56277 68 aaPredicted RBP5.05□□□□□ -1.6
MSH2-204ENST00000461394 LINC00310P59036 64 aa5.05□□□□□ -1.6
MSH2-204ENST00000461394 PYY3Q5JQD4 70 aa5.05□□□□□ -1.6
MSH2-204ENST00000461394 SYT8Q8NBV8 401 aa5.05□□□□□ -1.6
MSH2-204ENST00000461394 CHCHD1Q96BP2 118 aaKnown RBP5.05□□□□□ -1.6
MSH2-204ENST00000461394 MAP1LC3AQ9H492 121 aa5.05□□□□□ -1.6
MSH2-204ENST00000461394 GCN1Q92616 2671 aaKnown RBP5.04□□□□□ -1.6
MSH2-204ENST00000461394 MAP1AP78559 2803 aaPredicted RBP5.04□□□□□ -1.6
MSH2-204ENST00000461394 TRGV11A0A075B6L2 103 aa5.04□□□□□ -1.6
MSH2-204ENST00000461394 H3BMM0 161 aa5.04□□□□□ -1.6
MSH2-204ENST00000461394 INSP01308 110 aa5.04□□□□□ -1.6
MSH2-204ENST00000461394 PPBPP02775 128 aa5.04□□□□□ -1.6
MSH2-204ENST00000461394 MED14OSP0DP75 135 aa5.04□□□□□ -1.6
MSH2-204ENST00000461394 RAB4AP20338 218 aa5.04□□□□□ -1.6
MSH2-204ENST00000461394 EVI2AP22794 236 aa5.04□□□□□ -1.6
MSH2-204ENST00000461394 KRTAP10-3P60369 221 aa5.04□□□□□ -1.6
MSH2-204ENST00000461394 JOSD1Q15040 202 aaPredicted RBP5.04□□□□□ -1.6
MSH2-204ENST00000461394 PMCHL1Q16048 86 aa5.04□□□□□ -1.6
MSH2-204ENST00000461394 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.04□□□□□ -1.6
MSH2-204ENST00000461394 AP1S3Q96PC3 154 aa5.04□□□□□ -1.6
MSH2-204ENST00000461394 TMEM208Q9BTX3 173 aa5.04□□□□□ -1.6
MSH2-204ENST00000461394 CNFNQ9BYD5 112 aa5.04□□□□□ -1.6
MSH2-204ENST00000461394 ZANQ9Y493 2812 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 IGHV3OR16-12A0A075B7B8 117 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 F5H697 171 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 LCE2BO14633 110 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 NPYP01303 97 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 IFI27P40305 119 aaPredicted RBP5.03□□□□□ -1.6
MSH2-204ENST00000461394 Q6ZWC4 215 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 C14orf178Q8N769 122 aaPredicted RBP5.03□□□□□ -1.6
MSH2-204ENST00000461394 OR2K2Q8NGT1 345 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 RNF185Q96GF1 192 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 LINC01587Q99440 93 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 DPH3P1Q9H4G8 78 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 SIGLEC8Q9NYZ4 499 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 U3KQK5 164 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 AGRNO00468 2067 aa5.03□□□□□ -1.6
MSH2-204ENST00000461394 ZFHX3Q15911 3703 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 CCDC168Q8NDH2 2452 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 HELZ2Q9BYK8 2649 aaKnown RBP5.02□□□□□ -1.61
MSH2-204ENST00000461394 IGHV4-4A0A075B6R2 117 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 TRAV26-2A0A0B4J265 109 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 IGHV3-16A0A0C4DH30 117 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 IGHV1-24A0A0C4DH33 117 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 RBMY1BA6NDE4 496 aaKnown RBP5.02□□□□□ -1.61
MSH2-204ENST00000461394 RBMY1EA6NEQ0 496 aaKnown RBP5.02□□□□□ -1.61
MSH2-204ENST00000461394 H0Y8G0 127 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 LEPROTL1O95214 131 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 RBMY1DP0C7P1 496 aaKnown RBP5.02□□□□□ -1.61
MSH2-204ENST00000461394 RNASE3P12724 160 aaKnown RBP5.02□□□□□ -1.61
MSH2-204ENST00000461394 NUTF2P61970 127 aaKnown RBP5.02□□□□□ -1.61
MSH2-204ENST00000461394 ZNF415Q09FC8 603 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 ODF3L2Q3SX64 289 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 DNLZQ5SXM8 178 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 AMTNQ6UX39 209 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 ZNF575Q86XF7 245 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 MRAP2Q96G30 205 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 HSPB8Q9UJY1 196 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 ZNF256Q9Y2P7 627 aaPredicted RBP5.02□□□□□ -1.61
MSH2-204ENST00000461394 LAMTOR2Q9Y2Q5 125 aa5.02□□□□□ -1.61
MSH2-204ENST00000461394 FASNP49327 2511 aaKnown RBP5.01□□□□□ -1.61
MSH2-204ENST00000461394 C20orf202A1L168 122 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 TSTD3H0UI37 97 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 IGLV1-51P01701 117 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 C3orf79P0CE67 100 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 GATA1P15976 413 aaPredicted RBP5.01□□□□□ -1.61
MSH2-204ENST00000461394 RPL35AP18077 110 aaKnown RBP5.01□□□□□ -1.61
MSH2-204ENST00000461394 ZNF56Q15929 161 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 FAM74A4Q5TZK3 123 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 GTSCR1Q86UQ5 136 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 LINC00482Q8N8I6 264 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 URB1-AS1Q96HZ7 61 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 MAP1LC3CQ9BXW4 147 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 PRO1933Q9H354 126 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 MDFICQ9P1T7 246 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 XCL2Q9UBD3 114 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 SONP18583 2426 aaKnown RBP5.01□□□□□ -1.61
MSH2-204ENST00000461394 HIVEP2P31629 2446 aa5.01□□□□□ -1.61
MSH2-204ENST00000461394 A8MTW9 85 aa5□□□□□ -1.61
MSH2-204ENST00000461394 TDRG1Q3Y452 100 aa5□□□□□ -1.61
MSH2-204ENST00000461394 C9orf66Q5T8R8 295 aa5□□□□□ -1.61
MSH2-204ENST00000461394 DGAT2L7PQ6IED9 249 aa5□□□□□ -1.61
MSH2-204ENST00000461394 C9orf85Q96MD7 179 aa5□□□□□ -1.61
MSH2-204ENST00000461394 VAMP8Q9BV40 100 aa5□□□□□ -1.61
MSH2-204ENST00000461394 NXT2Q9NPJ8 142 aaKnown RBP5□□□□□ -1.61
MSH2-204ENST00000461394 SCRT2Q9NQ03 307 aa5□□□□□ -1.61
MSH2-204ENST00000461394 UNC79Q9P2D8 2635 aa4.99□□□□□ -1.61
MSH2-204ENST00000461394 CRXO43186 299 aaPredicted RBP4.99□□□□□ -1.61
MSH2-204ENST00000461394 NXPH4O95158 308 aa4.99□□□□□ -1.61
MSH2-204ENST00000461394 GAS8-AS1O95177 125 aa4.99□□□□□ -1.61
MSH2-204ENST00000461394 PPP1R17O96001 155 aa4.99□□□□□ -1.61
MSH2-204ENST00000461394 HBDP02042 147 aa4.99□□□□□ -1.61
MSH2-204ENST00000461394 RBMY1A1P0DJD3 496 aaKnown RBP4.99□□□□□ -1.61
MSH2-204ENST00000461394 RBMY1CP0DJD4 496 aa4.99□□□□□ -1.61
MSH2-204ENST00000461394 PKIAP61925 76 aa4.99□□□□□ -1.61
MSH2-204ENST00000461394 RBMY1FQ15415 496 aaKnown RBP4.99□□□□□ -1.61
MSH2-204ENST00000461394 ZNF876PQ49A33 203 aa4.99□□□□□ -1.61
MSH2-204ENST00000461394 TRPT1Q86TN4 253 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms