RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 ZNF705GA8MUZ8 300 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 UMAD1C9J7I0 102 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 ZNF324O75467 553 aaPredicted RBP5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 CRISP2P16562 243 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 CCL20P78556 96 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 CASC10Q5T4H9 136 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 SLC51BQ86UW2 128 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 ARL6IP6Q8N6S5 226 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 FAM213BQ8TBF2 198 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 LINC00477Q96M19 166 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 LITAFQ99732 161 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 MAP1LC3BQ9GZQ8 125 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 TMEM167BQ9NRX6 74 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 DNAH1Q9P2D7 4330 aa5.67□□□□□ -1.5
ECHDC1-212ENST00000461239 SMIM9A6NGZ8 99 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 INSP01308 110 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 TCRAP04437 139 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 SLC25A5P05141 298 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 SULT1A2P50226 295 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 ZNF138P52744 262 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 UBE2G2P60604 165 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 EIF5AP63241 154 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 BTN1A1Q13410 526 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 FAM74A1Q5RGS3 127 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 ZFAND6Q6FIF0 208 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 GOLT1AQ6ZVE7 132 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 COMMD7Q86VX2 200 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 RXFP4Q8TDU9 374 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 LINC00479Q96M42 142 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 RPH3ALQ9UNE2 315 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 GOLT1BQ9Y3E0 138 aa5.66□□□□□ -1.5
ECHDC1-212ENST00000461239 RYR3Q15413 4870 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 TRAV12-3A0A0B4J271 114 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 A0A1B0GV50 99 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 C7orf71A4D174 169 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 C3orf84H3BNL1 204 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 CFC1BP0CG36 223 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 CFC1P0CG37 223 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 LEPP41159 167 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 CSN1S1P47710 185 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 C12orf74Q32Q52 190 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 TMEM78Q5T7P6 136 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 FAM159AQ6UWV7 190 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 DPPA3Q6W0C5 159 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 IQCF2Q8IXL9 164 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 C5orf17Q8NAS9 161 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 SFT2D1Q8WV19 159 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 LINC01587Q99440 93 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 EPDR1Q9UM22 224 aa5.65□□□□□ -1.5
ECHDC1-212ENST00000461239 A0A087WYN8 130 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 TRAV1-1A0A0B4J248 108 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 TRBV7-9A0A0J9YWB2 115 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 TEX46H3BTG2 121 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 K7EQD1 137 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 HBE1P02100 147 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 NMBP08949 121 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 TSPOP30536 169 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 RNASE4P34096 147 aaKnown RBP5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 ATP5G3P48201 142 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 EMP1P54849 157 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 TAS2R60P59551 318 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 RIGQ13278 110 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 RRN3P1Q2M238 152 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 UQCC3Q6UW78 93 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 TMEM256Q8N2U0 113 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 C11orf45Q8TAV5 145 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 CMTM2Q8TAZ6 248 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 C20orf144Q9BQM9 153 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 TP53TG3Q9ULZ0 132 aa5.64□□□□□ -1.51
ECHDC1-212ENST00000461239 VPS13DQ5THJ4 4388 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 H7BYZ3 331 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 NXPH4O95158 308 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 GPX1P07203 203 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 HTN1P15515 57 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 RAB5CP51148 216 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 ZNF80P51504 273 aaPredicted RBP5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 FAM222AQ5U5X8 452 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 Q6AWC8 147 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 ALKAL2Q6UX46 152 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 Q6ZTC4 211 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 C11orf72Q8NBR9 251 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 TMEM208Q9BTX3 173 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 PSG8Q9UQ74 426 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 LENEPQ9Y5L5 61 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 ALMS1Q8TCU4 4167 aa5.63□□□□□ -1.51
ECHDC1-212ENST00000461239 HYDINQ4G0P3 5121 aa5.62□□□□□ -1.51
ECHDC1-212ENST00000461239 RYR2Q92736 4967 aa5.62□□□□□ -1.51
ECHDC1-212ENST00000461239 SERTM2A0A1B0GWG4 89 aa5.62□□□□□ -1.51
ECHDC1-212ENST00000461239 F6UZH7 168 aa5.62□□□□□ -1.51
ECHDC1-212ENST00000461239 PEX7O00628 323 aa5.62□□□□□ -1.51
ECHDC1-212ENST00000461239 EIF5AL1Q6IS14 154 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-212ENST00000461239 CYB561D1Q8N8Q1 229 aa5.62□□□□□ -1.51
ECHDC1-212ENST00000461239 TMEM75Q8N9X5 138 aa5.62□□□□□ -1.51
ECHDC1-212ENST00000461239 LINC00467Q9BRT7 94 aa5.62□□□□□ -1.51
ECHDC1-212ENST00000461239 KLF12Q9Y4X4 402 aa5.62□□□□□ -1.51
ECHDC1-212ENST00000461239 ARL2-SNX15V9GYD0 113 aa5.62□□□□□ -1.51
ECHDC1-212ENST00000461239 KMT2AQ03164 3969 aa5.62□□□□□ -1.51
ECHDC1-212ENST00000461239 RAB19A4D1S5 217 aa5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 TMEM189A5PLL7 270 aa5.61□□□□□ -1.51
ECHDC1-212ENST00000461239 F8WDY8 70 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms