RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 TRBV7-3A0A075B6L6 115 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 C11orf86A6NJI1 115 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 CENPVL3A0A0U1RRI6 287 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 SLURP1P55000 103 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 CRIPAKQ8N1N5 446 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 Q8N1Y9 231 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 TOMM6Q96B49 74 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 COX7BP24311 80 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 FOXI1Q12951 378 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 C16orf54Q6UWD8 224 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 ASPHD1Q5U4P2 390 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 MRPL55Q7Z7F7 128 aaKnown RBP7□□□□□ -1.29
BRCA1-205ENST00000461221 HHLA3Q9XRX5 114 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 CACNA1DQ01668 2161 aa7□□□□□ -1.29
BRCA1-205ENST00000461221 INTS1Q8N201 2190 aaKnown RBP7□□□□□ -1.29
BRCA1-205ENST00000461221 C14orf177Q52M58 125 aa6.99□□□□□ -1.29
BRCA1-205ENST00000461221 MYO7BQ6PIF6 2116 aa6.99□□□□□ -1.29
BRCA1-205ENST00000461221 E9PLD3 99 aa6.99□□□□□ -1.29
BRCA1-205ENST00000461221 FAM186AA6NE01 2351 aa6.99□□□□□ -1.29
BRCA1-205ENST00000461221 THADAQ6YHU6 1953 aa6.99□□□□□ -1.29
BRCA1-205ENST00000461221 DEFB136Q30KP8 78 aa6.99□□□□□ -1.29
BRCA1-205ENST00000461221 COA6Q5JTJ3 125 aaKnown RBP6.98□□□□□ -1.29
BRCA1-205ENST00000461221 ANKRD39Q53RE8 183 aa6.98□□□□□ -1.29
BRCA1-205ENST00000461221 FAM110AQ9BQ89 295 aa6.98□□□□□ -1.29
BRCA1-205ENST00000461221 ABCA7Q8IZY2 2146 aa6.98□□□□□ -1.29
BRCA1-205ENST00000461221 SPTSSBQ8NFR3 76 aa6.98□□□□□ -1.29
BRCA1-205ENST00000461221 KIR2DL5BQ8NHK3 375 aa6.98□□□□□ -1.29
BRCA1-205ENST00000461221 AJUBAQ96IF1 538 aa6.98□□□□□ -1.29
BRCA1-205ENST00000461221 LINC00643Q86TS7 51 aa6.98□□□□□ -1.29
BRCA1-205ENST00000461221 UPK3BQ9BT76 320 aa6.98□□□□□ -1.29
BRCA1-205ENST00000461221 I3L2K1 104 aa6.98□□□□□ -1.29
BRCA1-205ENST00000461221 PRSS33Q8NF86 280 aa6.98□□□□□ -1.29
BRCA1-205ENST00000461221 LYPD6BQ8NI32 183 aa6.98□□□□□ -1.29
BRCA1-205ENST00000461221 BPY2O14599 106 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 ARFGEF3Q5TH69 2177 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 USP17L23D6RBM5 183 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 IL17DQ8TAD2 202 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 PRR15LQ9BU68 103 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 IGLV11-55A0A075B6I3 123 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 RNF183Q96D59 192 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 PROK2Q9HC23 129 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 IGHV1-58A0A0C4DH39 117 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 ZNF503-AS2A6NEH8 195 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 K7EMT4 169 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 DEFB113Q30KQ7 82 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 DAND5Q8N907 189 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 CLEC2BQ92478 149 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 GREB1Q4ZG55 1949 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 COL4A1P02462 1669 aa6.97□□□□□ -1.29
BRCA1-205ENST00000461221 FXYD2P54710 66 aa6.96□□□□□ -1.29
BRCA1-205ENST00000461221 MIR7-3HGQ8N6C7 128 aa6.96□□□□□ -1.29
BRCA1-205ENST00000461221 DOCK9Q9BZ29 2069 aa6.96□□□□□ -1.29
BRCA1-205ENST00000461221 IGHV7-81A0A0B4J1V7 117 aa6.96□□□□□ -1.29
BRCA1-205ENST00000461221 MYCNOSP40205 109 aa6.96□□□□□ -1.29
BRCA1-205ENST00000461221 ALPK2Q86TB3 2170 aa6.96□□□□□ -1.3
BRCA1-205ENST00000461221 WFDC2Q14508 124 aa6.96□□□□□ -1.3
BRCA1-205ENST00000461221 Q6ZUT4 128 aa6.96□□□□□ -1.3
BRCA1-205ENST00000461221 FAM215AQ9Y5M1 114 aa6.96□□□□□ -1.3
BRCA1-205ENST00000461221 DOCK6Q96HP0 2047 aa6.96□□□□□ -1.3
BRCA1-205ENST00000461221 TMEM89A2RUT3 159 aa6.96□□□□□ -1.3
BRCA1-205ENST00000461221 IGLV3-1P01715 115 aa6.96□□□□□ -1.3
BRCA1-205ENST00000461221 WNK3Q9BYP7 1800 aa6.96□□□□□ -1.3
BRCA1-205ENST00000461221 SPRY2O43597 315 aa6.96□□□□□ -1.3
BRCA1-205ENST00000461221 CTSZQ9UBR2 303 aa6.96□□□□□ -1.3
BRCA1-205ENST00000461221 YLPM1P49750 1951 aaKnown RBP6.95□□□□□ -1.3
BRCA1-205ENST00000461221 K7EIM0 57 aa6.95□□□□□ -1.3
BRCA1-205ENST00000461221 RPL39P62891 51 aaKnown RBP6.95□□□□□ -1.3
BRCA1-205ENST00000461221 FAM240AA0A1B0GVK7 77 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 WI2-2373I1.2A0A1W2PRP0 233 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 UFSP1Q6NVU6 142 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 GPHB5Q86YW7 130 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 RNF138Q8WVD3 245 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 KLK12Q9UKR0 248 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 AKAP6Q13023 2319 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 C2orf70A6NJV1 201 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 CTSGP08311 255 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 ATP5EP2Q5VTU8 51 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 V9GYY9 64 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 WDR90Q96KV7 1748 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 Q8NFD4 153 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 MSRB1Q9NZV6 116 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 TP53BP1Q12888 1972 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-205ENST00000461221 SCN5AQ14524 2016 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 CTRLP40313 264 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 LINC00173Q6ZV60 143 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 LCTP09848 1927 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 IGHV4OR15-8A0A075B7B6 117 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 A0A087WW49 117 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 TEX22C9J3V5 150 aa6.94□□□□□ -1.3
BRCA1-205ENST00000461221 TRBV10-1A0A0K0K1A3 114 aa6.93□□□□□ -1.3
BRCA1-205ENST00000461221 TRBV6-1A0A0K0K1D8 114 aa6.93□□□□□ -1.3
BRCA1-205ENST00000461221 C4orf3Q8WVX3 66 aa6.93□□□□□ -1.3
BRCA1-205ENST00000461221 ESM1Q9NQ30 184 aa6.93□□□□□ -1.3
BRCA1-205ENST00000461221 FAM236DA0A1B0GTK5 79 aa6.93□□□□□ -1.3
BRCA1-205ENST00000461221 FAM236CP0DP71 79 aa6.93□□□□□ -1.3
BRCA1-205ENST00000461221 MIAQ16674 131 aa6.93□□□□□ -1.3
BRCA1-205ENST00000461221 PRO0255Q9UI72 69 aa6.93□□□□□ -1.3
BRCA1-205ENST00000461221 DOCK3Q8IZD9 2030 aa6.93□□□□□ -1.3
BRCA1-205ENST00000461221 G3V4G9 280 aa6.93□□□□□ -1.3
BRCA1-205ENST00000461221 IGHV4-38-2P0DP08 117 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms