RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 OR4C46A6NHA9 309 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 PCP4L1A6NKN8 68 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 M0R2Z0 102 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 NPYP01303 97 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 CKS2P33552 79 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 TFPI2P48307 235 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 KHDC1LQ5JSQ8 128 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 MUC21Q5SSG8 566 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 SMIM15Q7Z3B0 74 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 KIR2DL5AQ8N109 375 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 ZNF664Q8N3J9 261 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 C9orf85Q96MD7 179 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 DUX3Q96PT4 197 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 FAM110AQ9BQ89 295 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 LINC00467Q9BRT7 94 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 SELENOKQ9Y6D0 94 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 NSD1Q96L73 2696 aaPredicted RBP8.03□□□□□ -1.12
IFT88-204ENST00000461115 OTOGQ6ZRI0 2925 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 IGLV2-18A0A075B6J9 118 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 A0A096LNJ9 63 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 M0R381 172 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 GNRH2O43555 120 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 SCGB1D1O95968 90 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 EVI2AP22794 236 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 CD300EQ496F6 205 aaPredicted RBP8.03□□□□□ -1.12
IFT88-204ENST00000461115 SPANXN1Q5VSR9 72 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 FAM159AQ6UWV7 190 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 SPATA12Q7Z6I5 190 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 NRACQ8N912 160 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 OR2K2Q8NGT1 345 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 MRAP2Q96G30 205 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 C20orf144Q9BQM9 153 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 MAP6D1Q9H9H5 199 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 KIF25-AS1Q9Y6Z4 181 aa8.03□□□□□ -1.12
IFT88-204ENST00000461115 FN1P02751 2386 aaKnown RBP8.02□□□□□ -1.13
IFT88-204ENST00000461115 IGHV3-16A0A0C4DH30 117 aa8.02□□□□□ -1.13
IFT88-204ENST00000461115 BTF3P20290 206 aaKnown RBP8.02□□□□□ -1.13
IFT88-204ENST00000461115 IFI27P40305 119 aaPredicted RBP8.02□□□□□ -1.13
IFT88-204ENST00000461115 LINC00315P59091 139 aa8.02□□□□□ -1.13
IFT88-204ENST00000461115 DEFB131AP59861 70 aa8.02□□□□□ -1.13
IFT88-204ENST00000461115 PRSS3P2Q8NHM4 247 aa8.02□□□□□ -1.13
IFT88-204ENST00000461115 DYNLRB2Q8TF09 96 aa8.02□□□□□ -1.13
IFT88-204ENST00000461115 NXT2Q9NPJ8 142 aaKnown RBP8.02□□□□□ -1.13
IFT88-204ENST00000461115 SETXQ7Z333 2677 aaKnown RBP8.01□□□□□ -1.13
IFT88-204ENST00000461115 IGHV1OR15-1A0A075B7D0 117 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 TRAV12-3A0A0B4J271 114 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 LINC00587B1AMM8 73 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 TSTD3H0UI37 97 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
IFT88-204ENST00000461115 LEPROTL1O95214 131 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 TNFRSF6BO95407 300 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 S100A4P26447 101 aaKnown RBP8.01□□□□□ -1.13
IFT88-204ENST00000461115 CMC4P56277 68 aaPredicted RBP8.01□□□□□ -1.13
IFT88-204ENST00000461115 KRTDAPP60985 99 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 PMCHL1Q16048 86 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 PIK3CD-AS1Q5SR53 167 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 FA2HQ7L5A8 372 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 PTH2Q96A98 100 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 MAP1LC3AQ9H492 121 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 DPH3P1Q9H4G8 78 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 PHLDA3Q9Y5J5 127 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 C2CD3Q4AC94 2353 aa8.01□□□□□ -1.13
IFT88-204ENST00000461115 SETD2Q9BYW2 2564 aaPredicted RBP8□□□□□ -1.13
IFT88-204ENST00000461115 CUBNO60494 3623 aa8□□□□□ -1.13
IFT88-204ENST00000461115 RBMY1BA6NDE4 496 aaKnown RBP8□□□□□ -1.13
IFT88-204ENST00000461115 RBMY1EA6NEQ0 496 aaKnown RBP8□□□□□ -1.13
IFT88-204ENST00000461115 J3KRW8 73 aa8□□□□□ -1.13
IFT88-204ENST00000461115 GAS8-AS1O95177 125 aa8□□□□□ -1.13
IFT88-204ENST00000461115 IGLV1-51P01701 117 aa8□□□□□ -1.13
IFT88-204ENST00000461115 RBMY1DP0C7P1 496 aaKnown RBP8□□□□□ -1.13
IFT88-204ENST00000461115 ODF3L2Q3SX64 289 aa8□□□□□ -1.13
IFT88-204ENST00000461115 NDUFA11Q86Y39 141 aa8□□□□□ -1.13
IFT88-204ENST00000461115 Q8N8P6 123 aa8□□□□□ -1.13
IFT88-204ENST00000461115 TMEM70Q9BUB7 260 aa8□□□□□ -1.13
IFT88-204ENST00000461115 ZNF747Q9BV97 191 aa8□□□□□ -1.13
IFT88-204ENST00000461115 KRTAP4-8Q9BYQ9 185 aa8□□□□□ -1.13
IFT88-204ENST00000461115 HSPB8Q9UJY1 196 aa8□□□□□ -1.13
IFT88-204ENST00000461115 SMKR1H3BMG3 65 aa7.99□□□□□ -1.13
IFT88-204ENST00000461115 SYS1-DBNDD2H3BUS1 97 aa7.99□□□□□ -1.13
IFT88-204ENST00000461115 K7EMI3 77 aa7.99□□□□□ -1.13
IFT88-204ENST00000461115 RPL32P62910 135 aaKnown RBP7.99□□□□□ -1.13
IFT88-204ENST00000461115 SPINK13Q1W4C9 94 aa7.99□□□□□ -1.13
IFT88-204ENST00000461115 PET117Q6UWS5 81 aa7.99□□□□□ -1.13
IFT88-204ENST00000461115 AP1S3Q96PC3 154 aa7.99□□□□□ -1.13
IFT88-204ENST00000461115 C20orf78Q9BR46 151 aa7.99□□□□□ -1.13
IFT88-204ENST00000461115 HIVEP1P15822 2718 aa7.98□□□□□ -1.13
IFT88-204ENST00000461115 TRGV11A0A075B6L2 103 aa7.98□□□□□ -1.13
IFT88-204ENST00000461115 KNCNA6PVL3 124 aa7.98□□□□□ -1.13
IFT88-204ENST00000461115 INAFM1C9JVW0 142 aa7.98□□□□□ -1.13
IFT88-204ENST00000461115 EREGO14944 169 aa7.98□□□□□ -1.13
IFT88-204ENST00000461115 CRLF1O75462 422 aa7.98□□□□□ -1.13
IFT88-204ENST00000461115 NCR2O95944 276 aa7.98□□□□□ -1.13
IFT88-204ENST00000461115 PPP1R17O96001 155 aa7.98□□□□□ -1.13
IFT88-204ENST00000461115 RBMY1A1P0DJD3 496 aaKnown RBP7.98□□□□□ -1.13
IFT88-204ENST00000461115 RBMY1CP0DJD4 496 aa7.98□□□□□ -1.13
IFT88-204ENST00000461115 KRTAP10-3P60369 221 aa7.98□□□□□ -1.13
IFT88-204ENST00000461115 SSTP61278 116 aa7.98□□□□□ -1.13
IFT88-204ENST00000461115 RBMY1FQ15415 496 aaKnown RBP7.98□□□□□ -1.13
IFT88-204ENST00000461115 C11orf44Q8N8P7 122 aa7.98□□□□□ -1.13
IFT88-204ENST00000461115 TRAV12-2A0A075B6T6 113 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms