RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 VAMP8Q9BV40 100 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 RBFOX3A6NFN3 312 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 K7EMT4 169 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 OVOL1O14753 267 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 HBE1P02100 147 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 TRGC1P0CF51 173 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 PSG9Q00887 426 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 ICAM4Q14773 271 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 PQLC2Q6ZP29 291 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 RNF182Q8N6D2 247 aa7.76□□□□□ -1.17
USP39-210ENST00000459775 IZUMO1RA6ND01 250 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 GGTLC3B5MD39 225 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 TAX1BP3O14907 124 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 HNRNPA3P51991 378 aaKnown RBP7.75□□□□□ -1.17
USP39-210ENST00000459775 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 FAM231DQ6ZW35 169 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 OR4B1Q8NGF8 309 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 NIPSNAP3BQ9BS92 247 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 TRBV19A0A075B6N1 114 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 ZNF705FA8MVS1 300 aaPredicted RBP7.75□□□□□ -1.17
USP39-210ENST00000459775 M0R3E3 92 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 CRXO43186 299 aaPredicted RBP7.75□□□□□ -1.17
USP39-210ENST00000459775 SPINK8P0C7L1 97 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 BCL2P10415 239 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 GATA1P15976 413 aaPredicted RBP7.75□□□□□ -1.17
USP39-210ENST00000459775 MYCNOSP40205 109 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 LINC00482Q8N8I6 264 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 OR4F17Q8NGA8 305 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 OR4F4Q96R69 305 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 RNASE7Q9H1E1 156 aaKnown RBP7.75□□□□□ -1.17
USP39-210ENST00000459775 TMEM14CQ9P0S9 112 aa7.75□□□□□ -1.17
USP39-210ENST00000459775 FRZBQ92765 325 aa7.74□□□□□ -1.17
USP39-210ENST00000459775 LINC00479Q96M42 142 aa7.74□□□□□ -1.17
USP39-210ENST00000459775 PRADC1Q9BSG0 188 aa7.74□□□□□ -1.17
USP39-210ENST00000459775 TRAV8-2A0A0B4J237 113 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 PGPA6NDG6 321 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 PSMB3P49720 205 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 RASL11AQ6T310 242 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 TMEM61Q8N0U2 210 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 Q9H3A6 140 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 NOTCH3Q9UM47 2321 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 C11orf94C9JXX5 98 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 SFTA3P0C7M3 94 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 GALR1P47211 349 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 ZNF506Q5JVG8 444 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 FAM90A2PQ658T7 463 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 DEFB125Q8N687 156 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 NAA38Q9BRA0 125 aaKnown RBP7.73□□□□□ -1.17
USP39-210ENST00000459775 TMEM167BQ9NRX6 74 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 PKIGQ9Y2B9 76 aa7.73□□□□□ -1.17
USP39-210ENST00000459775 A0A087WWC5 75 aa7.72□□□□□ -1.17
USP39-210ENST00000459775 SCO2A0A1W2PP80 73 aa7.72□□□□□ -1.17
USP39-210ENST00000459775 A0A1W2PS18 150 aa7.72□□□□□ -1.17
USP39-210ENST00000459775 ZNF705DP0CH99 300 aaPredicted RBP7.72□□□□□ -1.17
USP39-210ENST00000459775 ZNF705BP0CI00 300 aaPredicted RBP7.72□□□□□ -1.17
USP39-210ENST00000459775 LINC00694P0DN24 101 aa7.72□□□□□ -1.17
USP39-210ENST00000459775 DEFB114Q30KQ6 69 aa7.72□□□□□ -1.17
USP39-210ENST00000459775 C7orf71A4D174 169 aa7.72□□□□□ -1.17
USP39-210ENST00000459775 PRAC2D3DTV9 90 aa7.72□□□□□ -1.17
USP39-210ENST00000459775 H3BS24 57 aa7.72□□□□□ -1.17
USP39-210ENST00000459775 CCDC179H3BU77 68 aa7.72□□□□□ -1.17
USP39-210ENST00000459775 CYB561D1Q8N8Q1 229 aa7.72□□□□□ -1.17
USP39-210ENST00000459775 DYNLRB2Q8TF09 96 aa7.72□□□□□ -1.17
USP39-210ENST00000459775 IMMP2LQ96T52 175 aa7.72□□□□□ -1.17
USP39-210ENST00000459775 FAM231BA6NCW3 169 aa7.71□□□□□ -1.18
USP39-210ENST00000459775 CA1P00915 261 aaPredicted RBP7.71□□□□□ -1.18
USP39-210ENST00000459775 SRP19P09132 144 aaKnown RBP7.71□□□□□ -1.18
USP39-210ENST00000459775 GOLT1AQ6ZVE7 132 aa7.71□□□□□ -1.18
USP39-210ENST00000459775 MANBALQ9NQG1 85 aa7.71□□□□□ -1.18
USP39-210ENST00000459775 ZNF331Q9NQX6 463 aaPredicted RBP7.71□□□□□ -1.18
USP39-210ENST00000459775 TRAV8-1A0A0A6YYK1 113 aa7.7□□□□□ -1.18
USP39-210ENST00000459775 F6UB75 175 aa7.7□□□□□ -1.18
USP39-210ENST00000459775 SOCS3O14543 225 aa7.7□□□□□ -1.18
USP39-210ENST00000459775 ATP5LO75964 103 aa7.7□□□□□ -1.18
USP39-210ENST00000459775 SLC25A5P05141 298 aaKnown RBP7.7□□□□□ -1.18
USP39-210ENST00000459775 Q6ZVH6 145 aa7.7□□□□□ -1.18
USP39-210ENST00000459775 DCANP1Q8TF63 244 aa7.7□□□□□ -1.18
USP39-210ENST00000459775 NRN1Q9NPD7 142 aa7.7□□□□□ -1.18
USP39-210ENST00000459775 IGKV2-40A0A087WW87 121 aaPredicted RBP7.7□□□□□ -1.18
USP39-210ENST00000459775 IGKV2D-40P01614 121 aaPredicted RBP7.7□□□□□ -1.18
USP39-210ENST00000459775 ZNF688P0C7X2 276 aa7.7□□□□□ -1.18
USP39-210ENST00000459775 IGLL1P15814 213 aa7.7□□□□□ -1.18
USP39-210ENST00000459775 LOC107984640A0A0U1RRK4 108 aa7.69□□□□□ -1.18
USP39-210ENST00000459775 CTRLP40313 264 aa7.69□□□□□ -1.18
USP39-210ENST00000459775 MEIG1Q5JSS6 88 aa7.69□□□□□ -1.18
USP39-210ENST00000459775 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
USP39-210ENST00000459775 TM2D2Q9BX73 214 aa7.69□□□□□ -1.18
USP39-210ENST00000459775 SORL1Q92673 2214 aa7.69□□□□□ -1.18
USP39-210ENST00000459775 K7EP34 96 aa7.69□□□□□ -1.18
USP39-210ENST00000459775 TRGC2P03986 189 aa7.69□□□□□ -1.18
USP39-210ENST00000459775 IGLC3P0DOY3 106 aa7.69□□□□□ -1.18
USP39-210ENST00000459775 Q6ZN92 141 aa7.69□□□□□ -1.18
USP39-210ENST00000459775 OTORQ9NRC9 128 aa7.69□□□□□ -1.18
USP39-210ENST00000459775 ERCC8Q13216 396 aa7.68□□□□□ -1.18
USP39-210ENST00000459775 KIAA1644Q3SXP7 199 aa7.68□□□□□ -1.18
USP39-210ENST00000459775 GDF5OSQ5U4N7 250 aa7.68□□□□□ -1.18
USP39-210ENST00000459775 LCN12Q6JVE5 192 aa7.68□□□□□ -1.18
USP39-210ENST00000459775 C1orf158Q8N1D5 194 aa7.68□□□□□ -1.18
USP39-210ENST00000459775 VGLL1Q99990 258 aa7.68□□□□□ -1.18
USP39-210ENST00000459775 EPDR1Q9UM22 224 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms